RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 MAP3K8P41279 467 aa12.08□□□□□ -0.48
CHFR-216ENST00000538235 MRPL19P49406 292 aaKnown RBP12.08□□□□□ -0.48
CHFR-216ENST00000538235 CBX1P83916 185 aa12.08□□□□□ -0.48
CHFR-216ENST00000538235 BIKQ13323 160 aa12.08□□□□□ -0.48
CHFR-216ENST00000538235 OR1C1Q15619 314 aa12.08□□□□□ -0.48
CHFR-216ENST00000538235 PGS1Q32NB8 556 aa12.08□□□□□ -0.48
CHFR-216ENST00000538235 ZNF791Q3KP31 576 aaPredicted RBP12.08□□□□□ -0.48
CHFR-216ENST00000538235 GTDC1Q4AE62 458 aa12.08□□□□□ -0.48
CHFR-216ENST00000538235 CT45A2Q5DJT8 189 aa12.08□□□□□ -0.48
CHFR-216ENST00000538235 PIGGQ5H8A4 983 aa12.08□□□□□ -0.48
CHFR-216ENST00000538235 CPTPQ5TA50 214 aa12.08□□□□□ -0.48
CHFR-216ENST00000538235 BICRALQ6AI39 1079 aa12.08□□□□□ -0.48
CHFR-216ENST00000538235 OR5AK3PQ8NH89 298 aa12.08□□□□□ -0.48
CHFR-216ENST00000538235 CEP70Q8NHQ1 597 aa12.08□□□□□ -0.48
CHFR-216ENST00000538235 PSMA8Q8TAA3 256 aa12.08□□□□□ -0.48
CHFR-216ENST00000538235 HOXB13Q92826 284 aaPredicted RBP12.08□□□□□ -0.48
CHFR-216ENST00000538235 SCMH1Q96GD3 660 aa12.08□□□□□ -0.48
CHFR-216ENST00000538235 C16orf58Q96GQ5 468 aa12.08□□□□□ -0.48
CHFR-216ENST00000538235 CCDC28BQ9BUN5 200 aa12.08□□□□□ -0.48
CHFR-216ENST00000538235 DPY30Q9C005 99 aa12.08□□□□□ -0.48
CHFR-216ENST00000538235 BHLHE41Q9C0J9 482 aaPredicted RBP12.08□□□□□ -0.48
CHFR-216ENST00000538235 EPS8L2Q9H6S3 715 aa12.08□□□□□ -0.48
CHFR-216ENST00000538235 PROK2Q9HC23 129 aa12.08□□□□□ -0.48
CHFR-216ENST00000538235 SH2D2AQ9NP31 389 aa12.08□□□□□ -0.48
CHFR-216ENST00000538235 ACSS1Q9NUB1 689 aaPredicted RBP12.08□□□□□ -0.48
CHFR-216ENST00000538235 FLRT3Q9NZU0 649 aa12.08□□□□□ -0.48
CHFR-216ENST00000538235 NTMQ9P121 344 aa12.08□□□□□ -0.48
CHFR-216ENST00000538235 BCAP29Q9UHQ4 241 aa12.08□□□□□ -0.48
CHFR-216ENST00000538235 PSME2Q9UL46 239 aa12.08□□□□□ -0.48
CHFR-216ENST00000538235 RELNP78509 3460 aa12.08□□□□□ -0.48
CHFR-216ENST00000538235 A0A087WV62 115 aa12.07□□□□□ -0.48
CHFR-216ENST00000538235 GXYLT2A0PJZ3 443 aa12.07□□□□□ -0.48
CHFR-216ENST00000538235 G3V3Y1 287 aa12.07□□□□□ -0.48
CHFR-216ENST00000538235 UBDO15205 165 aa12.07□□□□□ -0.48
CHFR-216ENST00000538235 POLR3GO15318 223 aaPredicted RBP12.07□□□□□ -0.48
CHFR-216ENST00000538235 SUV39H1O43463 412 aa12.07□□□□□ -0.48
CHFR-216ENST00000538235 DPM1O60762 260 aa12.07□□□□□ -0.48
CHFR-216ENST00000538235 IGKV1D-16P01601 117 aa12.07□□□□□ -0.48
CHFR-216ENST00000538235 CCL3P10147 92 aa12.07□□□□□ -0.48
CHFR-216ENST00000538235 CAPN3P20807 821 aa12.07□□□□□ -0.48
CHFR-216ENST00000538235 PTPN6P29350 595 aa12.07□□□□□ -0.48
CHFR-216ENST00000538235 HLCSP50747 726 aa12.07□□□□□ -0.48
CHFR-216ENST00000538235 MLLT10P55197 1068 aa12.07□□□□□ -0.48
CHFR-216ENST00000538235 ARG2P78540 354 aa12.07□□□□□ -0.48
CHFR-216ENST00000538235 KLRB1Q12918 225 aa12.07□□□□□ -0.48
CHFR-216ENST00000538235 MLC1Q15049 377 aa12.07□□□□□ -0.48
CHFR-216ENST00000538235 RNFT1Q5M7Z0 435 aa12.07□□□□□ -0.48
CHFR-216ENST00000538235 IRAK1BP1Q5VVH5 260 aa12.07□□□□□ -0.48
CHFR-216ENST00000538235 OLIG3Q7RTU3 272 aa12.07□□□□□ -0.48
CHFR-216ENST00000538235 ZAR1Q86SH2 424 aa12.07□□□□□ -0.48
CHFR-216ENST00000538235 LSRQ86X29 649 aaPredicted RBP12.07□□□□□ -0.48
CHFR-216ENST00000538235 OR7G1Q8NGA0 311 aa12.07□□□□□ -0.48
CHFR-216ENST00000538235 OR8J2Q8NGG1 315 aa12.07□□□□□ -0.48
CHFR-216ENST00000538235 STON2Q8WXE9 905 aa12.07□□□□□ -0.48
CHFR-216ENST00000538235 PNPLA2Q96AD5 504 aa12.07□□□□□ -0.48
CHFR-216ENST00000538235 NTNG2Q96CW9 530 aa12.07□□□□□ -0.48
CHFR-216ENST00000538235 ART5Q96L15 291 aa12.07□□□□□ -0.48
CHFR-216ENST00000538235 BTBD9Q96Q07 612 aa12.07□□□□□ -0.48
CHFR-216ENST00000538235 EQTNQ9NQ60 294 aa12.07□□□□□ -0.48
CHFR-216ENST00000538235 KLHL1Q9NR64 748 aa12.07□□□□□ -0.48
CHFR-216ENST00000538235 GIMAP4Q9NUV9 329 aa12.07□□□□□ -0.48
CHFR-216ENST00000538235 B3GNT3Q9Y2A9 372 aa12.07□□□□□ -0.48
CHFR-216ENST00000538235 GPR55Q9Y2T6 319 aaPredicted RBP12.07□□□□□ -0.48
CHFR-216ENST00000538235 KCNE3Q9Y6H6 103 aa12.07□□□□□ -0.48
CHFR-216ENST00000538235 ZNF407Q9C0G0 2248 aa12.07□□□□□ -0.48
CHFR-216ENST00000538235 ZGRF1Q86YA3 2104 aa12.07□□□□□ -0.48
CHFR-216ENST00000538235 MED12Q93074 2177 aa12.06□□□□□ -0.48
CHFR-216ENST00000538235 A0A0G2JND7 137 aa12.06□□□□□ -0.48
CHFR-216ENST00000538235 C2orf92A0A1B0GVN3 265 aa12.06□□□□□ -0.48
CHFR-216ENST00000538235 A0A1W2PRB8 838 aa12.06□□□□□ -0.48
CHFR-216ENST00000538235 OR6C76A6NM76 312 aa12.06□□□□□ -0.48
CHFR-216ENST00000538235 PRAMEF2O60811 474 aa12.06□□□□□ -0.48
CHFR-216ENST00000538235 ABCB1P08183 1280 aaPredicted RBP12.06□□□□□ -0.48
CHFR-216ENST00000538235 VIMP08670 466 aaKnown RBP12.06□□□□□ -0.48
CHFR-216ENST00000538235 FBXO45P0C2W1 286 aa12.06□□□□□ -0.48
CHFR-216ENST00000538235 IDO1P14902 403 aa12.06□□□□□ -0.48
CHFR-216ENST00000538235 DRD4P21917 467 aa12.06□□□□□ -0.48
CHFR-216ENST00000538235 MPIP34949 423 aa12.06□□□□□ -0.48
CHFR-216ENST00000538235 SSR4P51571 173 aa12.06□□□□□ -0.48
CHFR-216ENST00000538235 FBXW4P57775 412 aa12.06□□□□□ -0.48
CHFR-216ENST00000538235 RPS26P62854 115 aaKnown RBP12.06□□□□□ -0.48
CHFR-216ENST00000538235 ZNF155Q12901 538 aaPredicted RBP12.06□□□□□ -0.48
CHFR-216ENST00000538235 ZNF169Q14929 603 aaPredicted RBP12.06□□□□□ -0.48
CHFR-216ENST00000538235 TIGD2Q4W5G0 525 aa12.06□□□□□ -0.48
CHFR-216ENST00000538235 MFSD12Q6NUT3 480 aa12.06□□□□□ -0.48
CHFR-216ENST00000538235 IL20RBQ6UXL0 311 aa12.06□□□□□ -0.48
CHFR-216ENST00000538235 DNAJC14Q6Y2X3 702 aaPredicted RBP12.06□□□□□ -0.48
CHFR-216ENST00000538235 GK5Q6ZS86 529 aa12.06□□□□□ -0.48
CHFR-216ENST00000538235 SLC29A4Q7RTT9 530 aa12.06□□□□□ -0.48
CHFR-216ENST00000538235 R3HCC1LQ7Z5L2 792 aaKnown RBP12.06□□□□□ -0.48
CHFR-216ENST00000538235 HOMEZQ8IX15 550 aa12.06□□□□□ -0.48
CHFR-216ENST00000538235 ZADH2Q8N4Q0 377 aa12.06□□□□□ -0.48
CHFR-216ENST00000538235 OR10G3Q8NGC4 313 aa12.06□□□□□ -0.48
CHFR-216ENST00000538235 HGDQ93099 445 aa12.06□□□□□ -0.48
CHFR-216ENST00000538235 VPS33AQ96AX1 596 aa12.06□□□□□ -0.48
CHFR-216ENST00000538235 ZBED6CLQ96FA7 236 aaPredicted RBP12.06□□□□□ -0.48
CHFR-216ENST00000538235 YIPF4Q9BSR8 244 aa12.06□□□□□ -0.48
CHFR-216ENST00000538235 RABEP2Q9H5N1 569 aa12.06□□□□□ -0.48
CHFR-216ENST00000538235 GPATCH2Q9NW75 528 aa12.06□□□□□ -0.48
CHFR-216ENST00000538235 FBXO34Q9NWN3 711 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms