RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 PCBP2Q15366 365 aaKnown RBP eCLIP5.14□□□□□ -1.59
PTPRD-213ENST00000537002 SLC10A6Q3KNW5 377 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 RNF212Q495C1 297 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 FAM69AQ5T7M9 428 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 FBXO46Q6PJ61 603 aaPredicted RBP5.14□□□□□ -1.59
PTPRD-213ENST00000537002 CLEC20AQ6ZU45 233 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 METTL3Q86U44 580 aaKnown RBP5.14□□□□□ -1.59
PTPRD-213ENST00000537002 NPAS3Q8IXF0 933 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 RGL4Q8IZJ4 473 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 IQCF1Q8N6M8 205 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 ELP5Q8TE02 316 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 SCARB1Q8WTV0 552 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 TCTEX1D2Q8WW35 142 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 FCAMRQ8WWV6 532 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 MRPS31Q92665 395 aaKnown RBP5.14□□□□□ -1.59
PTPRD-213ENST00000537002 PCED1BQ96HM7 432 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 FCRL1Q96LA6 429 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 C12orf42Q96LP6 360 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 MRI1Q9BV20 369 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.14□□□□□ -1.59
PTPRD-213ENST00000537002 BTBD1Q9H0C5 482 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 LMAN2LQ9H0V9 348 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 RNF167Q9H6Y7 350 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 SIPA1L1O43166 1804 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 LRRC72A6NJI9 287 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 INSIG1O15503 277 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 VNN2O95498 520 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 ADRB1P08588 477 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 CBR1P16152 277 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 RBMS1P29558 406 aaKnown RBP5.14□□□□□ -1.59
PTPRD-213ENST00000537002 KDELR2P33947 212 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 SPAM1P38567 509 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 SSR2P43308 183 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 PLD1Q13393 1074 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 TMEM81Q6P7N7 255 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 CEACAM19Q7Z692 300 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 OR9Q2Q8NGE9 314 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 SSX3Q99909 188 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 FAM120CQ9NX05 1096 aaKnown RBP5.14□□□□□ -1.59
PTPRD-213ENST00000537002 SDHAF2Q9NX18 166 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 MARCH4Q9P2E8 410 aaPredicted RBP5.14□□□□□ -1.59
PTPRD-213ENST00000537002 ACTL7AQ9Y615 435 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 V9GYH0 126 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 SHANK3Q9BYB0 1731 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 ARPC1BO15143 372 aaKnown RBP5.14□□□□□ -1.59
PTPRD-213ENST00000537002 OIP5O43482 229 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 KLK8O60259 260 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 RGS9O75916 674 aaPredicted RBP5.14□□□□□ -1.59
PTPRD-213ENST00000537002 ADAP00813 363 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 SRCP12931 536 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 TACR2P21452 398 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 AGTR1P30556 359 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 PBX3P40426 434 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 DGKGP49619 791 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 PITX1P78337 314 aaPredicted RBP5.14□□□□□ -1.59
PTPRD-213ENST00000537002 ODF4Q2M2E3 257 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 FAM109BQ6ICB4 259 aaPredicted RBP5.14□□□□□ -1.59
PTPRD-213ENST00000537002 KIAA1211LQ6NV74 962 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 HMGN2P46Q86SG4 172 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 ZNF557Q8N988 423 aaPredicted RBP5.14□□□□□ -1.59
PTPRD-213ENST00000537002 BEST4Q8NFU0 473 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 HMGB4Q8WW32 186 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 ZNF419Q96HQ0 510 aaPredicted RBP5.14□□□□□ -1.59
PTPRD-213ENST00000537002 NEDD4LQ96PU5 975 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 PTPN18Q99952 460 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 THAP7Q9BT49 309 aaPredicted RBP5.14□□□□□ -1.59
PTPRD-213ENST00000537002 SLC25A32Q9H2D1 315 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 SLC28A3Q9HAS3 691 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 SLC52A3Q9NQ40 469 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 OR2S2Q9NQN1 319 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 POT1Q9NUX5 634 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 FAM86C1Q9NVL1 165 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 COPS3Q9UNS2 423 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 MGAT4BQ9UQ53 548 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 QSER1Q2KHR3 1735 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 ELOA3DA6NLF2 546 aaPredicted RBP5.14□□□□□ -1.59
PTPRD-213ENST00000537002 SCAMP1O15126 338 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 FLRT2O43155 660 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 PAK4O96013 591 aaPredicted RBP5.14□□□□□ -1.59
PTPRD-213ENST00000537002 GBAP04062 536 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 CYP17A1P05093 508 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 CNR2P34972 360 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 FAM110CQ1W6H9 321 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 ELOA3BQ3SY89 546 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 RFTN2Q52LD8 501 aaPredicted RBP5.14□□□□□ -1.59
PTPRD-213ENST00000537002 PRAMEF13Q5VWM6 474 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 TMEM65Q6PI78 240 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 C3P1Q6ZMU1 363 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 ZNF600Q6ZNG1 722 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 LRRC28Q86X40 367 aaPredicted RBP5.14□□□□□ -1.59
PTPRD-213ENST00000537002 CACUL1Q86Y37 369 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 ELOA3Q8NG57 546 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 ZBED3Q96IU2 234 aaPredicted RBP5.14□□□□□ -1.59
PTPRD-213ENST00000537002 CMTM3Q96MX0 182 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 USB1Q9BQ65 265 aaKnown RBP5.14□□□□□ -1.59
PTPRD-213ENST00000537002 VPS29Q9UBQ0 182 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 MSRAQ9UJ68 235 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 ZFP37Q9Y6Q3 630 aaPredicted RBP5.14□□□□□ -1.59
PTPRD-213ENST00000537002 ARL6IP5O75915 188 aa5.14□□□□□ -1.59
PTPRD-213ENST00000537002 S1PR4O95977 384 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms