RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 GPALPP1Q8IXQ4 340 aa16.59■□□□□ 0.25
CCDC61-201ENST00000536603 FNDC5Q8NAU1 212 aa16.59■□□□□ 0.25
CCDC61-201ENST00000536603 C16orf52Q8NHV5 167 aa16.59■□□□□ 0.25
CCDC61-201ENST00000536603 SLC22A8Q8TCC7 542 aa16.59■□□□□ 0.25
CCDC61-201ENST00000536603 NR4A3Q92570 626 aa16.59■□□□□ 0.25
CCDC61-201ENST00000536603 KAT2AQ92830 837 aa16.59■□□□□ 0.25
CCDC61-201ENST00000536603 C7orf26Q96N11 449 aa16.59■□□□□ 0.25
CCDC61-201ENST00000536603 C1orf50Q9BV19 199 aa16.59■□□□□ 0.25
CCDC61-201ENST00000536603 TIMMDC1Q9NPL8 285 aa16.59■□□□□ 0.25
CCDC61-201ENST00000536603 MARCOQ9UEW3 520 aaPredicted RBP16.59■□□□□ 0.25
CCDC61-201ENST00000536603 SVILO95425 2214 aa16.59■□□□□ 0.25
CCDC61-201ENST00000536603 POLEQ07864 2286 aa16.59■□□□□ 0.25
CCDC61-201ENST00000536603 CCL21O00585 134 aa16.58■□□□□ 0.24
CCDC61-201ENST00000536603 UNC5CO95185 931 aa16.58■□□□□ 0.24
CCDC61-201ENST00000536603 NADKO95544 446 aaPredicted RBP16.58■□□□□ 0.24
CCDC61-201ENST00000536603 CBX7O95931 251 aa16.58■□□□□ 0.24
CCDC61-201ENST00000536603 CRYABP02511 175 aaKnown RBP16.58■□□□□ 0.24
CCDC61-201ENST00000536603 GRNP28799 593 aaKnown RBP16.58■□□□□ 0.24
CCDC61-201ENST00000536603 ASMTP46597 345 aa16.58■□□□□ 0.24
CCDC61-201ENST00000536603 NR0B1P51843 470 aaKnown RBP16.58■□□□□ 0.24
CCDC61-201ENST00000536603 NCBP2P52298 156 aaKnown RBP eCLIP16.58■□□□□ 0.24
CCDC61-201ENST00000536603 RIPPLY3P57055 190 aa16.58■□□□□ 0.24
CCDC61-201ENST00000536603 DUSP8Q13202 625 aa16.58■□□□□ 0.24
CCDC61-201ENST00000536603 IL23RQ5VWK5 629 aa16.58■□□□□ 0.24
CCDC61-201ENST00000536603 ANKRD26P1Q6NSI1 321 aa16.58■□□□□ 0.24
CCDC61-201ENST00000536603 MAVSQ7Z434 540 aa16.58■□□□□ 0.24
CCDC61-201ENST00000536603 GDF7Q7Z4P5 450 aa16.58■□□□□ 0.24
CCDC61-201ENST00000536603 FAM9CQ8IZT9 166 aa16.58■□□□□ 0.24
CCDC61-201ENST00000536603 KIRREL3Q8IZU9 778 aa16.58■□□□□ 0.24
CCDC61-201ENST00000536603 LIX1Q8N485 282 aa16.58■□□□□ 0.24
CCDC61-201ENST00000536603 SLC15A4Q8N697 577 aa16.58■□□□□ 0.24
CCDC61-201ENST00000536603 OR52R1Q8NGF1 315 aa16.58■□□□□ 0.24
CCDC61-201ENST00000536603 DNAJB8Q8NHS0 232 aa16.58■□□□□ 0.24
CCDC61-201ENST00000536603 ZNF675Q8TD23 568 aa16.58■□□□□ 0.24
CCDC61-201ENST00000536603 ZNF317Q96PQ6 595 aaPredicted RBP16.58■□□□□ 0.24
CCDC61-201ENST00000536603 REEP4Q9H6H4 257 aa16.58■□□□□ 0.24
CCDC61-201ENST00000536603 ANKRA2Q9H9E1 313 aa16.58■□□□□ 0.24
CCDC61-201ENST00000536603 SH3BGRL2Q9UJC5 107 aa16.58■□□□□ 0.24
CCDC61-201ENST00000536603 CFL2Q9Y281 166 aa16.58■□□□□ 0.24
CCDC61-201ENST00000536603 DTX4Q9Y2E6 619 aa16.58■□□□□ 0.24
CCDC61-201ENST00000536603 KLF2Q9Y5W3 355 aaPredicted RBP16.58■□□□□ 0.24
CCDC61-201ENST00000536603 EDF1O60869 148 aaKnown RBP16.57■□□□□ 0.24
CCDC61-201ENST00000536603 KITP10721 976 aa16.57■□□□□ 0.24
CCDC61-201ENST00000536603 NTSP30990 170 aa16.57■□□□□ 0.24
CCDC61-201ENST00000536603 TDGF1P3P51864 188 aa16.57■□□□□ 0.24
CCDC61-201ENST00000536603 ZNF324BQ6AW86 544 aaPredicted RBP16.57■□□□□ 0.24
CCDC61-201ENST00000536603 MTFR2Q6P444 385 aa16.57■□□□□ 0.24
CCDC61-201ENST00000536603 MRGPRGQ86SM5 289 aa16.57■□□□□ 0.24
CCDC61-201ENST00000536603 SULF2Q8IWU5 870 aa16.57■□□□□ 0.24
CCDC61-201ENST00000536603 LRRC34Q8IZ02 419 aa16.57■□□□□ 0.24
CCDC61-201ENST00000536603 TAGAPQ8N103 731 aa16.57■□□□□ 0.24
CCDC61-201ENST00000536603 ZNF441Q8N8Z8 693 aa16.57■□□□□ 0.24
CCDC61-201ENST00000536603 FAM98AQ8NCA5 519 aaKnown RBP16.57■□□□□ 0.24
CCDC61-201ENST00000536603 PSD4Q8NDX1 1056 aa16.57■□□□□ 0.24
CCDC61-201ENST00000536603 ADIPOR1Q96A54 375 aa16.57■□□□□ 0.24
CCDC61-201ENST00000536603 TP53INP1Q96A56 240 aa16.57■□□□□ 0.24
CCDC61-201ENST00000536603 PPCDCQ96CD2 204 aa16.57■□□□□ 0.24
CCDC61-201ENST00000536603 NUF2Q9BZD4 464 aa16.57■□□□□ 0.24
CCDC61-201ENST00000536603 GLIPR2Q9H4G4 154 aa16.57■□□□□ 0.24
CCDC61-201ENST00000536603 AKTIPQ9H8T0 292 aa16.57■□□□□ 0.24
CCDC61-201ENST00000536603 CHST11Q9NPF2 352 aa16.57■□□□□ 0.24
CCDC61-201ENST00000536603 SH3BP4Q9P0V3 963 aa16.57■□□□□ 0.24
CCDC61-201ENST00000536603 KLF13Q9Y2Y9 288 aaPredicted RBP16.57■□□□□ 0.24
CCDC61-201ENST00000536603 ASPDHA6ND91 283 aa16.56■□□□□ 0.24
CCDC61-201ENST00000536603 KLRC4-KLRK1H3BQV0 150 aa16.56■□□□□ 0.24
CCDC61-201ENST00000536603 ZNF195O14628 629 aa16.56■□□□□ 0.24
CCDC61-201ENST00000536603 PEX1O43933 1283 aa16.56■□□□□ 0.24
CCDC61-201ENST00000536603 PRPS2P11908 318 aa16.56■□□□□ 0.24
CCDC61-201ENST00000536603 COX6B1P14854 86 aa16.56■□□□□ 0.24
CCDC61-201ENST00000536603 GPX3P22352 226 aa16.56■□□□□ 0.24
CCDC61-201ENST00000536603 HTR1EP28566 365 aa16.56■□□□□ 0.24
CCDC61-201ENST00000536603 LSP1P33241 339 aa16.56■□□□□ 0.24
CCDC61-201ENST00000536603 GPR85P60893 370 aa16.56■□□□□ 0.24
CCDC61-201ENST00000536603 EMX2Q04743 252 aa16.56■□□□□ 0.24
CCDC61-201ENST00000536603 RBPJQ06330 500 aa16.56■□□□□ 0.24
CCDC61-201ENST00000536603 PTGR1Q14914 329 aa16.56■□□□□ 0.24
CCDC61-201ENST00000536603 ZNF385BQ569K4 471 aa16.56■□□□□ 0.24
CCDC61-201ENST00000536603 CGB2Q6NT52 195 aa16.56■□□□□ 0.24
CCDC61-201ENST00000536603 LYPD8Q6UX82 237 aa16.56■□□□□ 0.24
CCDC61-201ENST00000536603 TMEM64Q6YI46 380 aa16.56■□□□□ 0.24
CCDC61-201ENST00000536603 RTL4Q6ZR62 310 aa16.56■□□□□ 0.24
CCDC61-201ENST00000536603 WDR75Q8IWA0 830 aaKnown RBP16.56■□□□□ 0.24
CCDC61-201ENST00000536603 CPSF7Q8N684 471 aaKnown RBP16.56■□□□□ 0.24
CCDC61-201ENST00000536603 OR7G2Q8NG99 324 aa16.56■□□□□ 0.24
CCDC61-201ENST00000536603 ITLN2Q8WWU7 325 aaPredicted RBP16.56■□□□□ 0.24
CCDC61-201ENST00000536603 CIDECQ96AQ7 238 aaPredicted RBP16.56■□□□□ 0.24
CCDC61-201ENST00000536603 CCDC120Q96HB5 630 aa16.56■□□□□ 0.24
CCDC61-201ENST00000536603 SGCZQ96LD1 299 aa16.56■□□□□ 0.24
CCDC61-201ENST00000536603 SEC14L3Q9UDX4 400 aa16.56■□□□□ 0.24
CCDC61-201ENST00000536603 PRODH2Q9UF12 536 aa16.56■□□□□ 0.24
CCDC61-201ENST00000536603 ITGB1BP2Q9UKP3 347 aa16.56■□□□□ 0.24
CCDC61-201ENST00000536603 EIF3LQ9Y262 564 aaKnown RBP16.56■□□□□ 0.24
CCDC61-201ENST00000536603 TBX19O60806 448 aa16.55■□□□□ 0.24
CCDC61-201ENST00000536603 NME6O75414 186 aaPredicted RBP16.55■□□□□ 0.24
CCDC61-201ENST00000536603 BCAS2O75934 225 aaPredicted RBP16.55■□□□□ 0.24
CCDC61-201ENST00000536603 FBXO45P0C2W1 286 aa16.55■□□□□ 0.24
CCDC61-201ENST00000536603 MST1P26927 711 aa16.55■□□□□ 0.24
CCDC61-201ENST00000536603 PTGER4P35408 488 aa16.55■□□□□ 0.24
CCDC61-201ENST00000536603 MEOX1P50221 254 aa16.55■□□□□ 0.24
CCDC61-201ENST00000536603 EMDP50402 254 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms