RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 NCBP2P52298 156 aaKnown RBP eCLIP12.1□□□□□ -0.47
PRKDC-206ENST00000536429 PLGLB1Q02325 96 aa12.1□□□□□ -0.47
PRKDC-206ENST00000536429 SLC22A10Q63ZE4 541 aa12.1□□□□□ -0.47
PRKDC-206ENST00000536429 TMEM107Q6UX40 140 aa12.1□□□□□ -0.47
PRKDC-206ENST00000536429 NPSR1Q6W5P4 371 aa12.1□□□□□ -0.47
PRKDC-206ENST00000536429 NCCRP1Q6ZVX7 275 aaPredicted RBP12.1□□□□□ -0.47
PRKDC-206ENST00000536429 IKBIPQ70UQ0 350 aa12.1□□□□□ -0.47
PRKDC-206ENST00000536429 SPPL2CQ8IUH8 684 aa12.1□□□□□ -0.47
PRKDC-206ENST00000536429 FAM9CQ8IZT9 166 aa12.1□□□□□ -0.47
PRKDC-206ENST00000536429 GHDCQ8N2G8 530 aa12.1□□□□□ -0.47
PRKDC-206ENST00000536429 FBXW8Q8N3Y1 598 aa12.1□□□□□ -0.47
PRKDC-206ENST00000536429 ZNF781Q8N8C0 355 aa12.1□□□□□ -0.47
PRKDC-206ENST00000536429 ANKRD42Q8N9B4 389 aa12.1□□□□□ -0.47
PRKDC-206ENST00000536429 C17orf47Q8NEP4 570 aa12.1□□□□□ -0.47
PRKDC-206ENST00000536429 PPP1R14CQ8TAE6 165 aa12.1□□□□□ -0.47
PRKDC-206ENST00000536429 RELTQ969Z4 430 aa12.1□□□□□ -0.47
PRKDC-206ENST00000536429 CIDECQ96AQ7 238 aaPredicted RBP12.1□□□□□ -0.47
PRKDC-206ENST00000536429 METTL2AQ96IZ6 378 aaKnown RBP12.1□□□□□ -0.47
PRKDC-206ENST00000536429 MAGED4Q96JG8 741 aa12.1□□□□□ -0.47
PRKDC-206ENST00000536429 SORT1Q99523 831 aa12.1□□□□□ -0.47
PRKDC-206ENST00000536429 CCT7Q99832 543 aa12.1□□□□□ -0.47
PRKDC-206ENST00000536429 TAS2R7Q9NYW3 318 aa12.1□□□□□ -0.47
PRKDC-206ENST00000536429 CCL21O00585 134 aa12.09□□□□□ -0.47
PRKDC-206ENST00000536429 BIRC5O15392 142 aa12.09□□□□□ -0.47
PRKDC-206ENST00000536429 ERLIN1O75477 346 aa12.09□□□□□ -0.47
PRKDC-206ENST00000536429 ABCB1P08183 1280 aaPredicted RBP12.09□□□□□ -0.47
PRKDC-206ENST00000536429 MYZAPP0CAP1 466 aa12.09□□□□□ -0.47
PRKDC-206ENST00000536429 EFNA1P20827 205 aaPredicted RBP12.09□□□□□ -0.47
PRKDC-206ENST00000536429 MPIP34949 423 aa12.09□□□□□ -0.47
PRKDC-206ENST00000536429 MAGEA5P43359 124 aa12.09□□□□□ -0.47
PRKDC-206ENST00000536429 WDR4P57081 412 aaKnown RBP12.09□□□□□ -0.47
PRKDC-206ENST00000536429 CORO7P57737 925 aa12.09□□□□□ -0.47
PRKDC-206ENST00000536429 ABCE1P61221 599 aaKnown RBP12.09□□□□□ -0.47
PRKDC-206ENST00000536429 RBPJQ06330 500 aa12.09□□□□□ -0.47
PRKDC-206ENST00000536429 RPS6KA2Q15349 733 aa12.09□□□□□ -0.47
PRKDC-206ENST00000536429 C3P1Q6ZMU1 363 aa12.09□□□□□ -0.47
PRKDC-206ENST00000536429 Q6ZPB1 254 aaPredicted RBP12.09□□□□□ -0.47
PRKDC-206ENST00000536429 GK5Q6ZS86 529 aa12.09□□□□□ -0.47
PRKDC-206ENST00000536429 ZNF551Q7Z340 670 aaPredicted RBP12.09□□□□□ -0.47
PRKDC-206ENST00000536429 SAMD14Q8IZD0 417 aaPredicted RBP12.09□□□□□ -0.47
PRKDC-206ENST00000536429 SPPL2AQ8TCT8 520 aa12.09□□□□□ -0.47
PRKDC-206ENST00000536429 MGARPQ8TDB4 240 aa12.09□□□□□ -0.47
PRKDC-206ENST00000536429 HGDQ93099 445 aa12.09□□□□□ -0.47
PRKDC-206ENST00000536429 OMA1Q96E52 524 aa12.09□□□□□ -0.47
PRKDC-206ENST00000536429 CCDC120Q96HB5 630 aa12.09□□□□□ -0.47
PRKDC-206ENST00000536429 LCORQ96JN0 433 aaPredicted RBP12.09□□□□□ -0.47
PRKDC-206ENST00000536429 PPP1R36Q96LQ0 422 aa12.09□□□□□ -0.47
PRKDC-206ENST00000536429 VSTM2LQ96N03 204 aa12.09□□□□□ -0.47
PRKDC-206ENST00000536429 AMDHD1Q96NU7 426 aa12.09□□□□□ -0.47
PRKDC-206ENST00000536429 PAIP2Q9BPZ3 127 aaKnown RBP12.09□□□□□ -0.47
PRKDC-206ENST00000536429 C1orf50Q9BV19 199 aa12.09□□□□□ -0.47
PRKDC-206ENST00000536429 ZDHHC11Q9H8X9 412 aa12.09□□□□□ -0.47
PRKDC-206ENST00000536429 IL1RL2Q9HB29 575 aa12.09□□□□□ -0.47
PRKDC-206ENST00000536429 FOLH1BQ9HBA9 442 aa12.09□□□□□ -0.47
PRKDC-206ENST00000536429 TMBIM4Q9HC24 238 aa12.09□□□□□ -0.47
PRKDC-206ENST00000536429 PLSCR2Q9NRY7 297 aa12.09□□□□□ -0.47
PRKDC-206ENST00000536429 PLEKHB1Q9UF11 243 aaPredicted RBP12.09□□□□□ -0.47
PRKDC-206ENST00000536429 GPR55Q9Y2T6 319 aaPredicted RBP12.09□□□□□ -0.47
PRKDC-206ENST00000536429 WBP11Q9Y2W2 641 aaKnown RBP12.09□□□□□ -0.47
PRKDC-206ENST00000536429 HRH3Q9Y5N1 445 aa12.09□□□□□ -0.47
PRKDC-206ENST00000536429 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.09□□□□□ -0.47
PRKDC-206ENST00000536429 CROCCQ5TZA2 2017 aa12.08□□□□□ -0.48
PRKDC-206ENST00000536429 A0A1B0GUH1 482 aa12.08□□□□□ -0.48
PRKDC-206ENST00000536429 TMEM120BA0PK00 339 aa12.08□□□□□ -0.48
PRKDC-206ENST00000536429 PLOD3O60568 738 aa12.08□□□□□ -0.48
PRKDC-206ENST00000536429 PPM1BO75688 479 aa12.08□□□□□ -0.48
PRKDC-206ENST00000536429 ZWINTO95229 277 aa12.08□□□□□ -0.48
PRKDC-206ENST00000536429 HSPA4LO95757 839 aa12.08□□□□□ -0.48
PRKDC-206ENST00000536429 CT45A8P0DMV1 189 aa12.08□□□□□ -0.48
PRKDC-206ENST00000536429 CT45A9P0DMV2 189 aa12.08□□□□□ -0.48
PRKDC-206ENST00000536429 ABOP16442 354 aa12.08□□□□□ -0.48
PRKDC-206ENST00000536429 COL8A1P27658 744 aa12.08□□□□□ -0.48
PRKDC-206ENST00000536429 PPICP45877 212 aa12.08□□□□□ -0.48
PRKDC-206ENST00000536429 SLC1A6P48664 564 aa12.08□□□□□ -0.48
PRKDC-206ENST00000536429 NRG3P56975 720 aa12.08□□□□□ -0.48
PRKDC-206ENST00000536429 MAGOHP61326 146 aaKnown RBP12.08□□□□□ -0.48
PRKDC-206ENST00000536429 KCNJ2P63252 427 aa12.08□□□□□ -0.48
PRKDC-206ENST00000536429 PLCXD2Q0VAA5 305 aa12.08□□□□□ -0.48
PRKDC-206ENST00000536429 PDE7AQ13946 482 aa12.08□□□□□ -0.48
PRKDC-206ENST00000536429 CASP8Q14790 479 aa12.08□□□□□ -0.48
PRKDC-206ENST00000536429 PDCD2Q16342 344 aaPredicted RBP12.08□□□□□ -0.48
PRKDC-206ENST00000536429 CT45A2Q5DJT8 189 aa12.08□□□□□ -0.48
PRKDC-206ENST00000536429 C6orf136Q5SQH8 315 aa12.08□□□□□ -0.48
PRKDC-206ENST00000536429 WDR53Q7Z5U6 358 aaPredicted RBP12.08□□□□□ -0.48
PRKDC-206ENST00000536429 SLC22A16Q86VW1 577 aa12.08□□□□□ -0.48
PRKDC-206ENST00000536429 DOLPP1Q86YN1 238 aa12.08□□□□□ -0.48
PRKDC-206ENST00000536429 DND1Q8IYX4 353 aaKnown RBP12.08□□□□□ -0.48
PRKDC-206ENST00000536429 OR4N2Q8NGD1 307 aa12.08□□□□□ -0.48
PRKDC-206ENST00000536429 DIO2Q92813 273 aa12.08□□□□□ -0.48
PRKDC-206ENST00000536429 TMBIM1Q969X1 311 aa12.08□□□□□ -0.48
PRKDC-206ENST00000536429 TLCD1Q96CP7 247 aa12.08□□□□□ -0.48
PRKDC-206ENST00000536429 JSRP1Q96MG2 331 aaPredicted RBP12.08□□□□□ -0.48
PRKDC-206ENST00000536429 BTBD9Q96Q07 612 aa12.08□□□□□ -0.48
PRKDC-206ENST00000536429 PHF12Q96QT6 1004 aa12.08□□□□□ -0.48
PRKDC-206ENST00000536429 NODALQ96S42 347 aa12.08□□□□□ -0.48
PRKDC-206ENST00000536429 DOHHQ9BU89 302 aa12.08□□□□□ -0.48
PRKDC-206ENST00000536429 REEP4Q9H6H4 257 aa12.08□□□□□ -0.48
PRKDC-206ENST00000536429 CNIH4Q9P003 139 aa12.08□□□□□ -0.48
PRKDC-206ENST00000536429 TNFRSF10DQ9UBN6 386 aa12.08□□□□□ -0.48
PRKDC-206ENST00000536429 PRODH2Q9UF12 536 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms