RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 SMIM6P0DI80 62 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 HLA-EP13747 358 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 NME1P15531 152 aaKnown RBP3.53□□□□□ -1.84
MCF2-210ENST00000536274 ZNF44P15621 663 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 TIMP2P16035 220 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 ANXA7P20073 488 aaKnown RBP3.53□□□□□ -1.84
MCF2-210ENST00000536274 KIR3DL1P43629 444 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 OR1E2P47887 323 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 OR1G1P47890 313 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 RNF144AP50876 292 aaPredicted RBP3.53□□□□□ -1.84
MCF2-210ENST00000536274 CDKN2DP55273 166 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 OR2B8PP59922 312 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 SPCS3P61009 180 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 STXBP1P61764 594 aaKnown RBP3.53□□□□□ -1.84
MCF2-210ENST00000536274 E2F1Q01094 437 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 TRA2AQ13595 282 aaKnown RBP eCLIP3.53□□□□□ -1.84
MCF2-210ENST00000536274 BOP1Q14137 746 aaKnown RBP3.53□□□□□ -1.84
MCF2-210ENST00000536274 HLXQ14774 488 aaPredicted RBP3.53□□□□□ -1.84
MCF2-210ENST00000536274 EIF2S3LQ2VIR3 472 aaKnown RBP3.53□□□□□ -1.84
MCF2-210ENST00000536274 AVPI1Q5T686 147 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 OR2G6Q5TZ20 316 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 SLC30A6Q6NXT4 461 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 LYPD4Q6UWN0 246 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 ABHD15Q6UXT9 468 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 CDKL3Q8IVW4 592 aaPredicted RBP3.53□□□□□ -1.84
MCF2-210ENST00000536274 MSRB3Q8IXL7 192 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 IZUMO1Q8IYV9 350 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 STK40Q8N2I9 435 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 SVOPLQ8N434 492 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 PRR18Q8N4B5 295 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 CELF5Q8N6W0 485 aaKnown RBP3.53□□□□□ -1.84
MCF2-210ENST00000536274 TMEM185AQ8NFB2 350 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 OR9Q2Q8NGE9 314 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 THAP6Q8TBB0 222 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 ISOC2Q96AB3 205 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 TMEM143Q96AN5 459 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 C1GALT1C1Q96EU7 318 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 CCDC74BQ96LY2 380 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 MOGAT1Q96PD6 335 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 NEU1Q99519 415 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 PDCD10Q9BUL8 212 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 SPATA5L1Q9BVQ7 753 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 PARD6GQ9BYG4 376 aaPredicted RBP3.53□□□□□ -1.84
MCF2-210ENST00000536274 ARL6Q9H0F7 186 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 PPP1R3EQ9H7J1 279 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 EML4Q9HC35 981 aaKnown RBP3.53□□□□□ -1.84
MCF2-210ENST00000536274 C11orf16Q9NQ32 467 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 RNF146Q9NTX7 359 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 ACSS1Q9NUB1 689 aaPredicted RBP3.53□□□□□ -1.84
MCF2-210ENST00000536274 TXNL4BQ9NX01 149 aaKnown RBP3.53□□□□□ -1.84
MCF2-210ENST00000536274 MARK1Q9P0L2 795 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 GLS2Q9UI32 602 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 LEF1Q9UJU2 399 aaPredicted RBP3.53□□□□□ -1.84
MCF2-210ENST00000536274 ADAM28Q9UKQ2 775 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 DUSP12Q9UNI6 340 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 POLR3HQ9Y535 204 aaPredicted RBP3.53□□□□□ -1.84
MCF2-210ENST00000536274 FXYD6-FXYD2A0A087WZ82 144 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 ELOVL7A1L3X0 281 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 BTBD17A6NE02 478 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 ANKRD61A6NGH8 418 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 C2CD4BA6NLJ0 364 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 J3KTA2 159 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 ACKR2O00590 384 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 MID1O15344 667 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 OR4F21O95013 312 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 F2P00734 622 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 OPN1SWP03999 348 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 ZDHHC11BP0C7U3 371 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 VSIG8P0DPA2 414 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 SNHG28P0DPA3 235 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 TXNP10599 105 aaKnown RBP3.52□□□□□ -1.85
MCF2-210ENST00000536274 AKR1A1P14550 325 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 DAOP14920 347 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 ELNP15502 786 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 NFKB1P19838 968 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 SOX18P35713 384 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 SLC11A2P49281 568 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 ZNF143P52747 638 aaPredicted RBP3.52□□□□□ -1.85
MCF2-210ENST00000536274 DMP1Q13316 513 aaPredicted RBP3.52□□□□□ -1.85
MCF2-210ENST00000536274 TMEM132BQ14DG7 1078 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 OR4D1Q15615 310 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 NTRK2Q16620 822 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 AARDQ4LEZ3 155 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 SGO1Q5FBB7 561 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 PYY3Q5JQD4 70 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 OR4F3Q6IEY1 312 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 LCLAT1Q6UWP7 414 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 CLEC9AQ6UXN8 241 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 DEF8Q6ZN54 512 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 USP30Q70CQ3 517 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 PRSS45Q7RTY3 260 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 TMEM135Q86UB9 458 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 GPR135Q8IZ08 494 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 ADGRF3Q8IZF5 1079 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 RBFAQ8N0V3 343 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 GJD3Q8N144 294 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 LRRC18Q8N456 261 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 MEIOBQ8N635 442 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 KDF1Q8NAX2 398 aaPredicted RBP3.52□□□□□ -1.85
MCF2-210ENST00000536274 ZSCAN1Q8NBB4 408 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms