RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 PRR22Q8IZ63 422 aa12.01□□□□□ -0.49
RTN3-207ENST00000536011 C1orf52Q8N6N3 182 aaKnown RBP12.01□□□□□ -0.49
RTN3-207ENST00000536011 OR1J4Q8NGS1 313 aa12.01□□□□□ -0.49
RTN3-207ENST00000536011 UHMK1Q8TAS1 419 aaKnown RBP12.01□□□□□ -0.49
RTN3-207ENST00000536011 GNRHR2Q96P88 292 aa12.01□□□□□ -0.49
RTN3-207ENST00000536011 TIMP4Q99727 224 aa12.01□□□□□ -0.49
RTN3-207ENST00000536011 OSBPL11Q9BXB4 747 aa12.01□□□□□ -0.49
RTN3-207ENST00000536011 ITPAQ9BY32 194 aa12.01□□□□□ -0.49
RTN3-207ENST00000536011 PRDM14Q9GZV8 571 aa12.01□□□□□ -0.49
RTN3-207ENST00000536011 NXF5Q9H1B4 397 aaKnown RBP12.01□□□□□ -0.49
RTN3-207ENST00000536011 UBQLN3Q9H347 655 aa12.01□□□□□ -0.49
RTN3-207ENST00000536011 PFDN4Q9NQP4 134 aa12.01□□□□□ -0.49
RTN3-207ENST00000536011 FARSBQ9NSD9 589 aaKnown RBP12.01□□□□□ -0.49
RTN3-207ENST00000536011 MAT2BQ9NZL9 334 aa12.01□□□□□ -0.49
RTN3-207ENST00000536011 KLRF1Q9NZS2 232 aa12.01□□□□□ -0.49
RTN3-207ENST00000536011 ZNF629Q9UEG4 869 aaPredicted RBP12.01□□□□□ -0.49
RTN3-207ENST00000536011 MCM8Q9UJA3 840 aa12.01□□□□□ -0.49
RTN3-207ENST00000536011 CAMK2AQ9UQM7 478 aa12.01□□□□□ -0.49
RTN3-207ENST00000536011 L3MBTL1Q9Y468 752 aa12.01□□□□□ -0.49
RTN3-207ENST00000536011 GNG14A0A1W2PPG7 69 aa12□□□□□ -0.49
RTN3-207ENST00000536011 MANBAO00462 879 aa12□□□□□ -0.49
RTN3-207ENST00000536011 ULK1O75385 1050 aa12□□□□□ -0.49
RTN3-207ENST00000536011 OR4F21O95013 312 aa12□□□□□ -0.49
RTN3-207ENST00000536011 ACTL6AO96019 429 aa12□□□□□ -0.49
RTN3-207ENST00000536011 ENO1P06733 434 aaKnown RBP12□□□□□ -0.49
RTN3-207ENST00000536011 ABCB1P08183 1280 aaPredicted RBP12□□□□□ -0.49
RTN3-207ENST00000536011 DRD2P14416 443 aa12□□□□□ -0.49
RTN3-207ENST00000536011 TSPAN8P19075 237 aa12□□□□□ -0.49
RTN3-207ENST00000536011 S1PR1P21453 382 aa12□□□□□ -0.49
RTN3-207ENST00000536011 BMP5P22003 454 aa12□□□□□ -0.49
RTN3-207ENST00000536011 ATP5F1P24539 256 aaPredicted RBP12□□□□□ -0.49
RTN3-207ENST00000536011 UQCRC1P31930 480 aa12□□□□□ -0.49
RTN3-207ENST00000536011 KIR2DL3P43628 341 aa12□□□□□ -0.49
RTN3-207ENST00000536011 PPICP45877 212 aa12□□□□□ -0.49
RTN3-207ENST00000536011 GSTM5P46439 218 aa12□□□□□ -0.49
RTN3-207ENST00000536011 PKNOX1P55347 436 aa12□□□□□ -0.49
RTN3-207ENST00000536011 ACSM2AQ08AH3 577 aa12□□□□□ -0.49
RTN3-207ENST00000536011 LCP2Q13094 533 aa12□□□□□ -0.49
RTN3-207ENST00000536011 RCAN2Q14206 197 aa12□□□□□ -0.49
RTN3-207ENST00000536011 HEPACAMQ14CZ8 416 aa12□□□□□ -0.49
RTN3-207ENST00000536011 NNATQ16517 81 aa12□□□□□ -0.49
RTN3-207ENST00000536011 ERCC6LQ2NKX8 1250 aa12□□□□□ -0.49
RTN3-207ENST00000536011 ZNF678Q5SXM1 525 aa12□□□□□ -0.49
RTN3-207ENST00000536011 ACSM2BQ68CK6 577 aa12□□□□□ -0.49
RTN3-207ENST00000536011 BICRALQ6AI39 1079 aa12□□□□□ -0.49
RTN3-207ENST00000536011 VASNQ6EMK4 673 aa12□□□□□ -0.49
RTN3-207ENST00000536011 SCIMPQ6UWF3 145 aa12□□□□□ -0.49
RTN3-207ENST00000536011 ANGPTL8Q6UXH0 198 aa12□□□□□ -0.49
RTN3-207ENST00000536011 RPS27LQ71UM5 84 aaKnown RBP12□□□□□ -0.49
RTN3-207ENST00000536011 CDYL2Q8N8U2 506 aa12□□□□□ -0.49
RTN3-207ENST00000536011 METTL6Q8TCB7 284 aa12□□□□□ -0.49
RTN3-207ENST00000536011 ACMSDQ8TDX5 336 aa12□□□□□ -0.49
RTN3-207ENST00000536011 TM4SF18Q96CE8 201 aa12□□□□□ -0.49
RTN3-207ENST00000536011 TMCO6Q96DC7 493 aa12□□□□□ -0.49
RTN3-207ENST00000536011 OMA1Q96E52 524 aa12□□□□□ -0.49
RTN3-207ENST00000536011 FETUBQ9UGM5 382 aa12□□□□□ -0.49
RTN3-207ENST00000536011 ZNF639Q9UID6 485 aa12□□□□□ -0.49
RTN3-207ENST00000536011 UTS2RQ9UKP6 389 aa12□□□□□ -0.49
RTN3-207ENST00000536011 NINQ8N4C6 2090 aa11.99□□□□□ -0.49
RTN3-207ENST00000536011 SPG11Q96JI7 2443 aa11.99□□□□□ -0.49
RTN3-207ENST00000536011 PRAMEF25A6NGN4 478 aa11.99□□□□□ -0.49
RTN3-207ENST00000536011 FRG2CA6NGY1 282 aa11.99□□□□□ -0.49
RTN3-207ENST00000536011 CD8B2A6NJW9 211 aa11.99□□□□□ -0.49
RTN3-207ENST00000536011 SYT5O00445 386 aa11.99□□□□□ -0.49
RTN3-207ENST00000536011 PCDH7O60245 1069 aa11.99□□□□□ -0.49
RTN3-207ENST00000536011 GSTA1P08263 222 aa11.99□□□□□ -0.49
RTN3-207ENST00000536011 IMPDH1P20839 514 aa11.99□□□□□ -0.49
RTN3-207ENST00000536011 DRD5P21918 477 aa11.99□□□□□ -0.49
RTN3-207ENST00000536011 KRT20P35900 424 aa11.99□□□□□ -0.49
RTN3-207ENST00000536011 NAA20P61599 178 aa11.99□□□□□ -0.49
RTN3-207ENST00000536011 MRPS22P82650 360 aaKnown RBP11.99□□□□□ -0.49
RTN3-207ENST00000536011 MGAT2Q10469 447 aa11.99□□□□□ -0.49
RTN3-207ENST00000536011 EXOSC7Q15024 291 aaKnown RBP11.99□□□□□ -0.49
RTN3-207ENST00000536011 TESK1Q15569 626 aa11.99□□□□□ -0.49
RTN3-207ENST00000536011 FBXL19-AS1Q494R0 122 aa11.99□□□□□ -0.49
RTN3-207ENST00000536011 FNDC7Q5VTL7 733 aa11.99□□□□□ -0.49
RTN3-207ENST00000536011 NSUN5P2Q63ZY6 315 aa11.99□□□□□ -0.49
RTN3-207ENST00000536011 ENPP6Q6UWR7 440 aa11.99□□□□□ -0.49
RTN3-207ENST00000536011 LIX1LQ8IVB5 337 aa11.99□□□□□ -0.49
RTN3-207ENST00000536011 TMEM151AQ8N4L1 468 aa11.99□□□□□ -0.49
RTN3-207ENST00000536011 CEP112Q8N8E3 955 aa11.99□□□□□ -0.49
RTN3-207ENST00000536011 ADCY4Q8NFM4 1077 aa11.99□□□□□ -0.49
RTN3-207ENST00000536011 OR52R1Q8NGF1 315 aa11.99□□□□□ -0.49
RTN3-207ENST00000536011 ZNF675Q8TD23 568 aa11.99□□□□□ -0.49
RTN3-207ENST00000536011 RNASE6Q93091 150 aaKnown RBP11.99□□□□□ -0.49
RTN3-207ENST00000536011 ABTB1Q969K4 478 aaPredicted RBP11.99□□□□□ -0.49
RTN3-207ENST00000536011 CTHRC1Q96CG8 243 aa11.99□□□□□ -0.49
RTN3-207ENST00000536011 CCDC126Q96EE4 140 aa11.99□□□□□ -0.49
RTN3-207ENST00000536011 CNRIP1Q96F85 164 aaPredicted RBP11.99□□□□□ -0.49
RTN3-207ENST00000536011 TMEM237Q96Q45 408 aa11.99□□□□□ -0.49
RTN3-207ENST00000536011 HBEGFQ99075 208 aa11.99□□□□□ -0.49
RTN3-207ENST00000536011 SENP1Q9P0U3 644 aa11.99□□□□□ -0.49
RTN3-207ENST00000536011 PSMC3IPQ9P2W1 217 aaPredicted RBP11.99□□□□□ -0.49
RTN3-207ENST00000536011 DTX4Q9Y2E6 619 aa11.99□□□□□ -0.49
RTN3-207ENST00000536011 PLLPQ9Y342 182 aa11.99□□□□□ -0.49
RTN3-207ENST00000536011 ARHGAP21Q5T5U3 1957 aa11.99□□□□□ -0.49
RTN3-207ENST00000536011 EXPH5Q8NEV8 1989 aa11.99□□□□□ -0.49
RTN3-207ENST00000536011 NCKAP5O14513 1909 aa11.98□□□□□ -0.49
RTN3-207ENST00000536011 A0A1B0GTL3 188 aa11.98□□□□□ -0.49
RTN3-207ENST00000536011 OR6C70A6NIJ9 312 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms