RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 GPR18Q14330 331 aa12.58□□□□□ -0.4
VPS33B-202ENST00000535906 LTB4RQ15722 352 aa12.58□□□□□ -0.4
VPS33B-202ENST00000535906 CEBPEQ15744 281 aa12.58□□□□□ -0.4
VPS33B-202ENST00000535906 Q6ZSR6 202 aa12.58□□□□□ -0.4
VPS33B-202ENST00000535906 SLC44A3Q8N4M1 653 aa12.58□□□□□ -0.4
VPS33B-202ENST00000535906 FRMD1Q8N878 549 aa12.58□□□□□ -0.4
VPS33B-202ENST00000535906 B3GNT7Q8NFL0 401 aa12.58□□□□□ -0.4
VPS33B-202ENST00000535906 OR10G6Q8NH81 332 aa12.58□□□□□ -0.4
VPS33B-202ENST00000535906 C9orf43Q8TAL5 461 aaPredicted RBP12.58□□□□□ -0.4
VPS33B-202ENST00000535906 HMGB4Q8WW32 186 aa12.58□□□□□ -0.4
VPS33B-202ENST00000535906 ELP4Q96EB1 424 aa12.58□□□□□ -0.4
VPS33B-202ENST00000535906 FAM210AQ96ND0 272 aa12.58□□□□□ -0.4
VPS33B-202ENST00000535906 OR2A5Q96R48 311 aa12.58□□□□□ -0.4
VPS33B-202ENST00000535906 FUZQ9BT04 418 aa12.58□□□□□ -0.4
VPS33B-202ENST00000535906 C6orf106Q9H6K1 298 aaPredicted RBP12.58□□□□□ -0.4
VPS33B-202ENST00000535906 BCL2L10Q9HD36 194 aa12.58□□□□□ -0.4
VPS33B-202ENST00000535906 EQTNQ9NQ60 294 aa12.58□□□□□ -0.4
VPS33B-202ENST00000535906 TRPV5Q9NQA5 729 aa12.58□□□□□ -0.4
VPS33B-202ENST00000535906 A3GALT2U3KPV4 340 aa12.58□□□□□ -0.4
VPS33B-202ENST00000535906 SHISA7A6NL88 538 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 ZSCAN9O15535 394 aaPredicted RBP12.57□□□□□ -0.4
VPS33B-202ENST00000535906 P2RX6O15547 441 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 TPST2O60704 377 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 DNAJB6O75190 326 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 SOX14O95416 240 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 ADAP00813 363 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 UGT2B7P16662 529 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 CD40LGP29965 261 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 OLR1P78380 273 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 RGS1Q08116 209 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 KIR2DS3Q14952 304 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 SFTPA2Q8IWL1 248 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 ZBTB8BQ8NAP8 495 aaPredicted RBP12.57□□□□□ -0.4
VPS33B-202ENST00000535906 FLCNQ8NFG4 579 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 NUP43Q8NFH3 380 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 OR56A1Q8NGH5 318 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 OR6T1Q8NGN1 323 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 BBS10Q8TAM1 723 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 KAT2AQ92830 837 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 TM4SF19Q96DZ7 209 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 C10orf90Q96M02 699 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 TWSG1Q9GZX9 223 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 C8orf33Q9H7E9 229 aaPredicted RBP12.57□□□□□ -0.4
VPS33B-202ENST00000535906 CNOT2Q9NZN8 540 aaKnown RBP12.57□□□□□ -0.4
VPS33B-202ENST00000535906 ZNF780BQ9Y6R6 833 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 KNL1Q8NG31 2342 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 GSAPA4D1B5 854 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 OR6C74A6NCV1 312 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 EFCAB10A6NFE3 127 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 C2CD4DB7Z1M9 353 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 EMC8O43402 210 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 SLC35G6P0C7Q6 338 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 NR2F6P10588 404 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 GRK5P34947 590 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 RGS6P49758 472 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 LIMK1P53667 647 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 PRR5P85299 388 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 TGM3Q08188 693 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 SFSWAPQ12872 951 aaKnown RBP12.57□□□□□ -0.4
VPS33B-202ENST00000535906 GPAT3Q53EU6 434 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 ARMCX4Q5H9R4 360 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 EOGTQ5NDL2 527 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 FCRL6Q6DN72 434 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 PLEKHG7Q6ZR37 379 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 WDR53Q7Z5U6 358 aaPredicted RBP12.57□□□□□ -0.4
VPS33B-202ENST00000535906 AMER2Q8N7J2 671 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 OR13H1Q8NG92 308 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 NT5CQ8TCD5 201 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 KLHL6Q8WZ60 621 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 ZG16BQ96DA0 208 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 ITPKCQ96DU7 683 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 NECTIN4Q96NY8 510 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 OR7D2Q96RA2 312 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 CDCA4Q9BXL8 241 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 UCK2Q9BZX2 261 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 NXF2Q9GZY0 626 aaKnown RBP12.57□□□□□ -0.4
VPS33B-202ENST00000535906 TCEAL2Q9H3H9 227 aaPredicted RBP12.57□□□□□ -0.4
VPS33B-202ENST00000535906 LYARQ9NX58 379 aaKnown RBP12.57□□□□□ -0.4
VPS33B-202ENST00000535906 PCDHGA3Q9Y5H0 932 aa12.57□□□□□ -0.4
VPS33B-202ENST00000535906 SCN2AQ99250 2005 aa12.56□□□□□ -0.4
VPS33B-202ENST00000535906 LRP4O75096 1905 aa12.56□□□□□ -0.4
VPS33B-202ENST00000535906 FAAHO00519 579 aa12.56□□□□□ -0.4
VPS33B-202ENST00000535906 TNFSF14O43557 240 aa12.56□□□□□ -0.4
VPS33B-202ENST00000535906 CNOT3O75175 753 aaKnown RBP12.56□□□□□ -0.4
VPS33B-202ENST00000535906 OXSR1O95747 527 aaPredicted RBP12.56□□□□□ -0.4
VPS33B-202ENST00000535906 LGI1O95970 557 aa12.56□□□□□ -0.4
VPS33B-202ENST00000535906 OSMP13725 252 aa12.56□□□□□ -0.4
VPS33B-202ENST00000535906 AKT2P31751 481 aa12.56□□□□□ -0.4
VPS33B-202ENST00000535906 MAN2A2P49641 1150 aa12.56□□□□□ -0.4
VPS33B-202ENST00000535906 YPEL5P62699 121 aa12.56□□□□□ -0.4
VPS33B-202ENST00000535906 LSM11P83369 360 aaKnown RBP eCLIP12.56□□□□□ -0.4
VPS33B-202ENST00000535906 CCINQ13939 588 aa12.56□□□□□ -0.4
VPS33B-202ENST00000535906 DEFB134Q4QY38 66 aa12.56□□□□□ -0.4
VPS33B-202ENST00000535906 PGBD2Q6P3X8 592 aa12.56□□□□□ -0.4
VPS33B-202ENST00000535906 TUBA3EQ6PEY2 450 aa12.56□□□□□ -0.4
VPS33B-202ENST00000535906 PTCHD4Q6ZW05 846 aa12.56□□□□□ -0.4
VPS33B-202ENST00000535906 ZNF367Q7RTV3 350 aa12.56□□□□□ -0.4
VPS33B-202ENST00000535906 SLC22A18ASQ8N1D0 253 aa12.56□□□□□ -0.4
VPS33B-202ENST00000535906 KBTBD8Q8NFY9 601 aa12.56□□□□□ -0.4
VPS33B-202ENST00000535906 ZCCHC10Q8TBK6 192 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms