RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 NXF5Q9H1B4 397 aaKnown RBP10.21□□□□□ -0.77
CLSTN3-206ENST00000535668 TRMT1Q9NXH9 659 aaKnown RBP10.21□□□□□ -0.77
CLSTN3-206ENST00000535668 ALKBH4Q9NXW9 302 aa10.21□□□□□ -0.77
CLSTN3-206ENST00000535668 DLGAP4Q9Y2H0 992 aa10.21□□□□□ -0.77
CLSTN3-206ENST00000535668 PLEKHA6Q9Y2H5 1048 aa10.21□□□□□ -0.77
CLSTN3-206ENST00000535668 GPR55Q9Y2T6 319 aaPredicted RBP10.21□□□□□ -0.77
CLSTN3-206ENST00000535668 RNF11Q9Y3C5 154 aa10.21□□□□□ -0.77
CLSTN3-206ENST00000535668 PCDHA9Q9Y5H5 950 aa10.21□□□□□ -0.77
CLSTN3-206ENST00000535668 KIAA1549Q9HCM3 1950 aa10.21□□□□□ -0.78
CLSTN3-206ENST00000535668 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.2□□□□□ -0.78
CLSTN3-206ENST00000535668 A0A1W2PPR1 153 aa10.2□□□□□ -0.78
CLSTN3-206ENST00000535668 GOLGA6L10A6NI86 522 aa10.2□□□□□ -0.78
CLSTN3-206ENST00000535668 OR7A17O14581 309 aa10.2□□□□□ -0.78
CLSTN3-206ENST00000535668 MSTNO14793 375 aa10.2□□□□□ -0.78
CLSTN3-206ENST00000535668 RAD51CO43502 376 aa10.2□□□□□ -0.78
CLSTN3-206ENST00000535668 TMCC2O75069 709 aa10.2□□□□□ -0.78
CLSTN3-206ENST00000535668 ICOSLGO75144 302 aa10.2□□□□□ -0.78
CLSTN3-206ENST00000535668 TNFSF13O75888 250 aa10.2□□□□□ -0.78
CLSTN3-206ENST00000535668 BCAS2O75934 225 aaPredicted RBP10.2□□□□□ -0.78
CLSTN3-206ENST00000535668 COL6A2P12110 1019 aa10.2□□□□□ -0.78
CLSTN3-206ENST00000535668 PAX1P15863 534 aa10.2□□□□□ -0.78
CLSTN3-206ENST00000535668 CSNK2A2P19784 350 aaPredicted RBP10.2□□□□□ -0.78
CLSTN3-206ENST00000535668 SRD5A2P31213 254 aa10.2□□□□□ -0.78
CLSTN3-206ENST00000535668 TRPC1P48995 793 aa10.2□□□□□ -0.78
CLSTN3-206ENST00000535668 EMDP50402 254 aa10.2□□□□□ -0.78
CLSTN3-206ENST00000535668 DGKQP52824 942 aa10.2□□□□□ -0.78
CLSTN3-206ENST00000535668 GNG11P61952 73 aa10.2□□□□□ -0.78
CLSTN3-206ENST00000535668 RCAN2Q14206 197 aa10.2□□□□□ -0.78
CLSTN3-206ENST00000535668 EIPR1Q53HC9 387 aa10.2□□□□□ -0.78
CLSTN3-206ENST00000535668 TECRLQ5HYJ1 363 aa10.2□□□□□ -0.78
CLSTN3-206ENST00000535668 DCST1Q5T197 706 aa10.2□□□□□ -0.78
CLSTN3-206ENST00000535668 BICRALQ6AI39 1079 aa10.2□□□□□ -0.78
CLSTN3-206ENST00000535668 ENPP6Q6UWR7 440 aa10.2□□□□□ -0.78
CLSTN3-206ENST00000535668 ZDHHC24Q6UX98 284 aa10.2□□□□□ -0.78
CLSTN3-206ENST00000535668 CAPN12Q6ZSI9 719 aa10.2□□□□□ -0.78
CLSTN3-206ENST00000535668 RAPH1Q70E73 1250 aa10.2□□□□□ -0.78
CLSTN3-206ENST00000535668 GOLGA7Q7Z5G4 137 aa10.2□□□□□ -0.78
CLSTN3-206ENST00000535668 VWA5B2Q8N398 1253 aa10.2□□□□□ -0.78
CLSTN3-206ENST00000535668 RNF175Q8N4F7 328 aa10.2□□□□□ -0.78
CLSTN3-206ENST00000535668 PPM1NQ8N819 430 aa10.2□□□□□ -0.78
CLSTN3-206ENST00000535668 C9orf106Q8NAJ2 232 aa10.2□□□□□ -0.78
CLSTN3-206ENST00000535668 OR1J4Q8NGS1 313 aa10.2□□□□□ -0.78
CLSTN3-206ENST00000535668 FBF1Q8TES7 1133 aa10.2□□□□□ -0.78
CLSTN3-206ENST00000535668 IGFBPL1Q8WX77 278 aa10.2□□□□□ -0.78
CLSTN3-206ENST00000535668 ZBTB26Q9HCK0 441 aa10.2□□□□□ -0.78
CLSTN3-206ENST00000535668 NEUROD4Q9HD90 331 aa10.2□□□□□ -0.78
CLSTN3-206ENST00000535668 SIRT5Q9NXA8 310 aa10.2□□□□□ -0.78
CLSTN3-206ENST00000535668 MAT2BQ9NZL9 334 aa10.2□□□□□ -0.78
CLSTN3-206ENST00000535668 DTX4Q9Y2E6 619 aa10.2□□□□□ -0.78
CLSTN3-206ENST00000535668 MXRA5Q9NR99 2828 aa10.19□□□□□ -0.78
CLSTN3-206ENST00000535668 FRG2CA6NGY1 282 aa10.19□□□□□ -0.78
CLSTN3-206ENST00000535668 GLOD5A6NK44 160 aa10.19□□□□□ -0.78
CLSTN3-206ENST00000535668 LINC01387J3KSC0 135 aa10.19□□□□□ -0.78
CLSTN3-206ENST00000535668 CBX7O95931 251 aa10.19□□□□□ -0.78
CLSTN3-206ENST00000535668 RBP1P09455 135 aa10.19□□□□□ -0.78
CLSTN3-206ENST00000535668 IFI6P09912 130 aa10.19□□□□□ -0.78
CLSTN3-206ENST00000535668 TMIGD3P0DMS9 266 aaPredicted RBP10.19□□□□□ -0.78
CLSTN3-206ENST00000535668 CYP4B1P13584 511 aa10.19□□□□□ -0.78
CLSTN3-206ENST00000535668 HSD3B1P14060 373 aa10.19□□□□□ -0.78
CLSTN3-206ENST00000535668 ZNF708P17019 499 aa10.19□□□□□ -0.78
CLSTN3-206ENST00000535668 HSD3B2P26439 372 aa10.19□□□□□ -0.78
CLSTN3-206ENST00000535668 GCKP35557 465 aa10.19□□□□□ -0.78
CLSTN3-206ENST00000535668 SLCO1A2P46721 670 aa10.19□□□□□ -0.78
CLSTN3-206ENST00000535668 MASP1P48740 699 aa10.19□□□□□ -0.78
CLSTN3-206ENST00000535668 LHX2P50458 406 aa10.19□□□□□ -0.78
CLSTN3-206ENST00000535668 GAS1P54826 345 aa10.19□□□□□ -0.78
CLSTN3-206ENST00000535668 HMGCS1Q01581 520 aa10.19□□□□□ -0.78
CLSTN3-206ENST00000535668 GALNT1Q10472 559 aaPredicted RBP10.19□□□□□ -0.78
CLSTN3-206ENST00000535668 DDX39BQ13838 428 aaKnown RBP10.19□□□□□ -0.78
CLSTN3-206ENST00000535668 KEAP1Q14145 624 aa10.19□□□□□ -0.78
CLSTN3-206ENST00000535668 KLC3Q6P597 504 aa10.19□□□□□ -0.78
CLSTN3-206ENST00000535668 GALNT18Q6P9A2 607 aa10.19□□□□□ -0.78
CLSTN3-206ENST00000535668 CTAGE3PQ8IX95 158 aa10.19□□□□□ -0.78
CLSTN3-206ENST00000535668 SAMD14Q8IZD0 417 aaPredicted RBP10.19□□□□□ -0.78
CLSTN3-206ENST00000535668 CNPY4Q8N129 248 aa10.19□□□□□ -0.78
CLSTN3-206ENST00000535668 TMEM151AQ8N4L1 468 aa10.19□□□□□ -0.78
CLSTN3-206ENST00000535668 WFDC11Q8NEX6 87 aa10.19□□□□□ -0.78
CLSTN3-206ENST00000535668 OR52B6Q8NGF0 335 aa10.19□□□□□ -0.78
CLSTN3-206ENST00000535668 KCTD4Q8WVF5 259 aa10.19□□□□□ -0.78
CLSTN3-206ENST00000535668 UCN3Q969E3 161 aa10.19□□□□□ -0.78
CLSTN3-206ENST00000535668 TM4SF18Q96CE8 201 aa10.19□□□□□ -0.78
CLSTN3-206ENST00000535668 MARK4Q96L34 752 aa10.19□□□□□ -0.78
CLSTN3-206ENST00000535668 RAB17Q9H0T7 212 aa10.19□□□□□ -0.78
CLSTN3-206ENST00000535668 EPB41L4BQ9H329 900 aa10.19□□□□□ -0.78
CLSTN3-206ENST00000535668 ACSS3Q9H6R3 686 aa10.19□□□□□ -0.78
CLSTN3-206ENST00000535668 PRODH2Q9UF12 536 aa10.19□□□□□ -0.78
CLSTN3-206ENST00000535668 PCTPQ9UKL6 214 aa10.19□□□□□ -0.78
CLSTN3-206ENST00000535668 PSME2Q9UL46 239 aa10.19□□□□□ -0.78
CLSTN3-206ENST00000535668 SLC6A5Q9Y345 797 aa10.19□□□□□ -0.78
CLSTN3-206ENST00000535668 TESMINQ9Y4I5 508 aa10.19□□□□□ -0.78
CLSTN3-206ENST00000535668 ANGPTL3Q9Y5C1 460 aa10.19□□□□□ -0.78
CLSTN3-206ENST00000535668 SONP18583 2426 aaKnown RBP10.19□□□□□ -0.78
CLSTN3-206ENST00000535668 A0A096LPK6 155 aa10.18□□□□□ -0.78
CLSTN3-206ENST00000535668 A0A1W2PS29 197 aa10.18□□□□□ -0.78
CLSTN3-206ENST00000535668 SERTM1A2A2V5 107 aa10.18□□□□□ -0.78
CLSTN3-206ENST00000535668 ZNF500O60304 480 aaPredicted RBP10.18□□□□□ -0.78
CLSTN3-206ENST00000535668 ZIC3O60481 467 aa10.18□□□□□ -0.78
CLSTN3-206ENST00000535668 PLOD3O60568 738 aa10.18□□□□□ -0.78
CLSTN3-206ENST00000535668 UGT2B11O75310 529 aa10.18□□□□□ -0.78
CLSTN3-206ENST00000535668 SH3BGRLO75368 114 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms