RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 ZNF558Q96NG5 402 aa13.11□□□□□ -0.31
LPCAT3-203ENST00000535479 MND1Q9BWT6 205 aa13.11□□□□□ -0.31
LPCAT3-203ENST00000535479 PPIL3Q9H2H8 161 aaKnown RBP13.11□□□□□ -0.31
LPCAT3-203ENST00000535479 CENPVL1A0A0U1RR11 272 aa13.11□□□□□ -0.31
LPCAT3-203ENST00000535479 FAM240BA0A1B0GVZ2 78 aa13.11□□□□□ -0.31
LPCAT3-203ENST00000535479 HYKKA2RU49 373 aa13.11□□□□□ -0.31
LPCAT3-203ENST00000535479 OR52A4PA6NMU1 304 aa13.11□□□□□ -0.31
LPCAT3-203ENST00000535479 FCMRO60667 390 aa13.11□□□□□ -0.31
LPCAT3-203ENST00000535479 SOD1P00441 154 aa13.11□□□□□ -0.31
LPCAT3-203ENST00000535479 POU3F3P20264 500 aaPredicted RBP13.11□□□□□ -0.31
LPCAT3-203ENST00000535479 SSTR2P30874 369 aa13.11□□□□□ -0.31
LPCAT3-203ENST00000535479 UQCRC1P31930 480 aa13.11□□□□□ -0.31
LPCAT3-203ENST00000535479 AHRP35869 848 aa13.11□□□□□ -0.31
LPCAT3-203ENST00000535479 GIPRP48546 466 aa13.11□□□□□ -0.31
LPCAT3-203ENST00000535479 INPP1P49441 399 aa13.11□□□□□ -0.31
LPCAT3-203ENST00000535479 AGFG1P52594 562 aaKnown RBP13.11□□□□□ -0.31
LPCAT3-203ENST00000535479 C1DQ13901 141 aaKnown RBP13.11□□□□□ -0.31
LPCAT3-203ENST00000535479 DDI2Q5TDH0 399 aa13.11□□□□□ -0.31
LPCAT3-203ENST00000535479 TRIQKQ629K1 86 aa13.11□□□□□ -0.31
LPCAT3-203ENST00000535479 PLET1Q6UQ28 207 aa13.11□□□□□ -0.31
LPCAT3-203ENST00000535479 HTR3DQ70Z44 454 aa13.11□□□□□ -0.31
LPCAT3-203ENST00000535479 FAM129CQ86XR2 697 aa13.11□□□□□ -0.31
LPCAT3-203ENST00000535479 RNF121Q9H920 327 aa13.11□□□□□ -0.31
LPCAT3-203ENST00000535479 THSD1Q9NS62 852 aa13.11□□□□□ -0.31
LPCAT3-203ENST00000535479 HCN2Q9UL51 889 aa13.11□□□□□ -0.31
LPCAT3-203ENST00000535479 BACE2Q9Y5Z0 518 aa13.11□□□□□ -0.31
LPCAT3-203ENST00000535479 TP53BP1Q12888 1972 aaPredicted RBP13.1□□□□□ -0.31
LPCAT3-203ENST00000535479 OTOL1A6NHN0 477 aaPredicted RBP13.1□□□□□ -0.31
LPCAT3-203ENST00000535479 MAPK8P45983 427 aa13.1□□□□□ -0.31
LPCAT3-203ENST00000535479 CSNK2BP67870 215 aa13.1□□□□□ -0.31
LPCAT3-203ENST00000535479 SRSF5Q13243 272 aaKnown RBP13.1□□□□□ -0.31
LPCAT3-203ENST00000535479 SP140Q13342 867 aa13.1□□□□□ -0.31
LPCAT3-203ENST00000535479 QPRTQ15274 297 aa13.1□□□□□ -0.31
LPCAT3-203ENST00000535479 TIMM50Q3ZCQ8 353 aa13.1□□□□□ -0.31
LPCAT3-203ENST00000535479 KLHL12Q53G59 568 aa13.1□□□□□ -0.31
LPCAT3-203ENST00000535479 SLC9B2Q86UD5 537 aa13.1□□□□□ -0.31
LPCAT3-203ENST00000535479 NR2C2APQ86WQ0 139 aa13.1□□□□□ -0.31
LPCAT3-203ENST00000535479 SLC43A3Q8NBI5 491 aa13.1□□□□□ -0.31
LPCAT3-203ENST00000535479 OR51L1Q8NGJ5 315 aa13.1□□□□□ -0.31
LPCAT3-203ENST00000535479 SLC25A46Q96AG3 418 aa13.1□□□□□ -0.31
LPCAT3-203ENST00000535479 RNF170Q96K19 258 aa13.1□□□□□ -0.31
LPCAT3-203ENST00000535479 SAP130Q9H0E3 1048 aa13.1□□□□□ -0.31
LPCAT3-203ENST00000535479 ENKD1Q9H0I2 346 aa13.1□□□□□ -0.31
LPCAT3-203ENST00000535479 TRIM45Q9H8W5 580 aaPredicted RBP13.1□□□□□ -0.31
LPCAT3-203ENST00000535479 KLHL1Q9NR64 748 aa13.1□□□□□ -0.31
LPCAT3-203ENST00000535479 SIRT3Q9NTG7 399 aaPredicted RBP13.1□□□□□ -0.31
LPCAT3-203ENST00000535479 IL36AQ9UHA7 158 aa13.1□□□□□ -0.31
LPCAT3-203ENST00000535479 ZFR2Q9UPR6 939 aaKnown RBP13.1□□□□□ -0.31
LPCAT3-203ENST00000535479 CORO2BQ9UQ03 480 aa13.1□□□□□ -0.31
LPCAT3-203ENST00000535479 RB1P06400 928 aa13.1□□□□□ -0.31
LPCAT3-203ENST00000535479 MYL12AP19105 171 aa13.1□□□□□ -0.31
LPCAT3-203ENST00000535479 TRHRP34981 398 aaPredicted RBP13.1□□□□□ -0.31
LPCAT3-203ENST00000535479 IRS1P35568 1242 aa13.1□□□□□ -0.31
LPCAT3-203ENST00000535479 PRLHRP49683 370 aa13.1□□□□□ -0.31
LPCAT3-203ENST00000535479 POLR2LP62875 67 aaKnown RBP13.1□□□□□ -0.31
LPCAT3-203ENST00000535479 EIF4HQ15056 248 aaKnown RBP13.1□□□□□ -0.31
LPCAT3-203ENST00000535479 WSCD2Q2TBF2 565 aa13.1□□□□□ -0.31
LPCAT3-203ENST00000535479 MSANTD1Q6ZTZ1 278 aa13.1□□□□□ -0.31
LPCAT3-203ENST00000535479 C19orf18Q8NEA5 215 aa13.1□□□□□ -0.31
LPCAT3-203ENST00000535479 OR4M1Q8NGD0 313 aa13.1□□□□□ -0.31
LPCAT3-203ENST00000535479 OR5H6Q8NGV6 325 aa13.1□□□□□ -0.31
LPCAT3-203ENST00000535479 OVCA2Q8WZ82 227 aa13.1□□□□□ -0.31
LPCAT3-203ENST00000535479 IRF7Q92985 503 aa13.1□□□□□ -0.31
LPCAT3-203ENST00000535479 MS4A3Q96HJ5 214 aa13.1□□□□□ -0.31
LPCAT3-203ENST00000535479 TEFMQ96QE5 360 aaKnown RBP13.1□□□□□ -0.31
LPCAT3-203ENST00000535479 SLC22A4Q9H015 551 aa13.1□□□□□ -0.31
LPCAT3-203ENST00000535479 BRF2Q9HAW0 419 aa13.1□□□□□ -0.31
LPCAT3-203ENST00000535479 LHX9Q9NQ69 397 aa13.1□□□□□ -0.31
LPCAT3-203ENST00000535479 MAN2C1Q9NTJ4 1040 aa13.1□□□□□ -0.31
LPCAT3-203ENST00000535479 IMP3Q9NV31 184 aaKnown RBP13.1□□□□□ -0.31
LPCAT3-203ENST00000535479 KCNK6Q9Y257 313 aa13.1□□□□□ -0.31
LPCAT3-203ENST00000535479 DENND4CQ5VZ89 1909 aa13.1□□□□□ -0.31
LPCAT3-203ENST00000535479 ZSCAN5BA6NJL1 495 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 PI15O43692 258 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 AKAP8O43823 692 aaKnown RBP13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 CXCL14O95715 111 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 CLUP10909 449 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 PPIBP23284 216 aaKnown RBP13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 ITGB8P26012 769 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 CST5P28325 142 aaPredicted RBP13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 CAMK2BQ13554 666 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 IRF5Q13568 498 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 CCDC149Q6ZUS6 474 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 CPA6Q8N4T0 437 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 C12orf76Q8N812 135 aaPredicted RBP13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 TMEM145Q8NBT3 493 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 TRMT2BQ96GJ1 504 aaKnown RBP13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 C1QTNF6Q9BXI9 259 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 GLIPR2Q9H4G4 154 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 GPBP1L1Q9HC44 474 aaPredicted RBP13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 HMX1Q9NP08 348 aaPredicted RBP13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 ASAH2Q9NR71 780 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 NDUFB11Q9NX14 153 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 NKIRAS2Q9NYR9 191 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 SLC9A8Q9Y2E8 581 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 SIRT4Q9Y6E7 314 aaPredicted RBP13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 A0A087WUU8 490 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 PRRT4C9JH25 899 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 SERPINI2O75830 405 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 HMGN2P05204 90 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms