RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	PLIN5	Q00G26	463 aa		10.59	□□□□□ -0.71
CTNND1-238	ENST00000534647	ID2	Q02363	134 aa		10.59	□□□□□ -0.71
CTNND1-238	ENST00000534647	SLC18A2	Q05940	514 aa		10.59	□□□□□ -0.71
CTNND1-238	ENST00000534647	SLAMF1	Q13291	335 aa		10.59	□□□□□ -0.71
CTNND1-238	ENST00000534647	OR4D1	Q15615	310 aa		10.59	□□□□□ -0.71
CTNND1-238	ENST00000534647	CEBPE	Q15744	281 aa		10.59	□□□□□ -0.71
CTNND1-238	ENST00000534647	ZKSCAN8	Q15776	578 aa	Predicted RBP	10.59	□□□□□ -0.71
CTNND1-238	ENST00000534647	NTRK2	Q16620	822 aa		10.59	□□□□□ -0.71
CTNND1-238	ENST00000534647	MED27	Q6P2C8	311 aa		10.59	□□□□□ -0.71
CTNND1-238	ENST00000534647	TIFAB	Q6ZNK6	161 aa		10.59	□□□□□ -0.71
CTNND1-238	ENST00000534647	DGAT2L6	Q6ZPD8	337 aa		10.59	□□□□□ -0.71
CTNND1-238	ENST00000534647	GPR180	Q86V85	440 aa		10.59	□□□□□ -0.71
CTNND1-238	ENST00000534647	CDC20B	Q86Y33	519 aa		10.59	□□□□□ -0.71
CTNND1-238	ENST00000534647	LACC1	Q8IV20	430 aa		10.59	□□□□□ -0.71
CTNND1-238	ENST00000534647	ZCCHC7	Q8N3Z6	543 aa	Known RBP	10.59	□□□□□ -0.71
CTNND1-238	ENST00000534647	SPATA6L	Q8N4H0	392 aa		10.59	□□□□□ -0.71
CTNND1-238	ENST00000534647	BANP	Q8N9N5	519 aa		10.59	□□□□□ -0.71
CTNND1-238	ENST00000534647	SNX31	Q8N9S9	440 aa		10.59	□□□□□ -0.71
CTNND1-238	ENST00000534647	RELL2	Q8NC24	303 aa	Predicted RBP	10.59	□□□□□ -0.71
CTNND1-238	ENST00000534647	OR7G3	Q8NG95	312 aa		10.59	□□□□□ -0.71
CTNND1-238	ENST00000534647	GOT1L1	Q8NHS2	421 aa	Predicted RBP	10.59	□□□□□ -0.71
CTNND1-238	ENST00000534647	BCAS4	Q8TDM0	211 aa		10.59	□□□□□ -0.71
CTNND1-238	ENST00000534647	ACMSD	Q8TDX5	336 aa		10.59	□□□□□ -0.71
CTNND1-238	ENST00000534647	MZB1	Q8WU39	189 aa		10.59	□□□□□ -0.71
CTNND1-238	ENST00000534647	TP53INP1	Q96A56	240 aa		10.59	□□□□□ -0.71
CTNND1-238	ENST00000534647	RGMA	Q96B86	450 aa		10.59	□□□□□ -0.71
CTNND1-238	ENST00000534647	NTNG2	Q96CW9	530 aa		10.59	□□□□□ -0.71
CTNND1-238	ENST00000534647	CLUHP3	Q96NS8	147 aa		10.59	□□□□□ -0.71
CTNND1-238	ENST00000534647	SECISBP2	Q96T21	854 aa	Known RBP	10.59	□□□□□ -0.71
CTNND1-238	ENST00000534647	GPR22	Q99680	433 aa		10.59	□□□□□ -0.71
CTNND1-238	ENST00000534647	TIMP4	Q99727	224 aa		10.59	□□□□□ -0.71
CTNND1-238	ENST00000534647	ZNF395	Q9H8N7	513 aa	Predicted RBP	10.59	□□□□□ -0.71
CTNND1-238	ENST00000534647	CD274	Q9NZQ7	290 aa		10.59	□□□□□ -0.71
CTNND1-238	ENST00000534647	PHF11	Q9UIL8	331 aa		10.59	□□□□□ -0.71
CTNND1-238	ENST00000534647	AKAP6	Q13023	2319 aa		10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	NDUFAB1	O14561	156 aa		10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	TYROBP	O43914	113 aa		10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	CCNT2	O60583	730 aa	Known RBP	10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	SNX4	O95219	450 aa		10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	GPR75	O95800	540 aa		10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	TGFB1	P01137	390 aa		10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	HPN	P05981	417 aa		10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	VIM	P08670	466 aa	Known RBP	10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	EPX	P11678	715 aa		10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	NEFH	P12036	1026 aa		10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	ALOX15	P16050	662 aa	Predicted RBP	10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	STMN1	P16949	149 aa		10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	CD53	P19397	219 aa		10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	UQCRC1	P31930	480 aa		10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	SSR2	P43308	183 aa		10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	CCT5	P48643	541 aa		10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	SERPINB8	P50452	374 aa		10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	SLC37A1	P57057	533 aa		10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	ADAM8	P78325	824 aa		10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	CRYZ	Q08257	329 aa	Known RBP	10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	ACSF3	Q4G176	576 aa	Predicted RBP	10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	FBXO48	Q5FWF7	155 aa		10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	NHSL2	Q5HYW2	709 aa		10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	FOXB2	Q5VYV0	432 aa		10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	NSUN5P2	Q63ZY6	315 aa		10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	VASN	Q6EMK4	673 aa		10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	SLC29A4	Q7RTT9	530 aa		10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	CPLX4	Q7Z7G2	160 aa		10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	KIF18B	Q86Y91	864 aa		10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	OR4N5	Q8IXE1	308 aa		10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	PM20D2	Q8IYS1	436 aa		10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	ZNF441	Q8N8Z8	693 aa		10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	NAXE	Q8NCW5	288 aa		10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	TNIP2	Q8NFZ5	429 aa		10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	OR10G3	Q8NGC4	313 aa		10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	STAG3L4	Q8TBR4	150 aa		10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	UBTD2	Q8WUN7	234 aa		10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	CKAP2	Q8WWK9	683 aa		10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	PPWD1	Q96BP3	646 aa	Known RBP	10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	CHMP6	Q96FZ7	201 aa		10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	RBBP8	Q99708	897 aa		10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	PRDM14	Q9GZV8	571 aa		10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	SLC6A15	Q9H2J7	730 aa		10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	UBQLN3	Q9H347	655 aa		10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	CCDC134	Q9H6E4	229 aa		10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	CAB39L	Q9H9S4	337 aa		10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	CBLC	Q9ULV8	474 aa		10.58	□□□□□ -0.72
CTNND1-238	ENST00000534647	CD8B2	A6NJW9	211 aa		10.57	□□□□□ -0.72
CTNND1-238	ENST00000534647	CAPN14	A8MX76	684 aa		10.57	□□□□□ -0.72
CTNND1-238	ENST00000534647	HRK	O00198	91 aa		10.57	□□□□□ -0.72
CTNND1-238	ENST00000534647	TP53I11	O14683	189 aa		10.57	□□□□□ -0.72
CTNND1-238	ENST00000534647	PHGDH	O43175	533 aa	Known RBP	10.57	□□□□□ -0.72
CTNND1-238	ENST00000534647	IL18BP	O95998	194 aa		10.57	□□□□□ -0.72
CTNND1-238	ENST00000534647	ARAF	P10398	606 aa		10.57	□□□□□ -0.72
CTNND1-238	ENST00000534647	BMP5	P22003	454 aa		10.57	□□□□□ -0.72
CTNND1-238	ENST00000534647	PTX3	P26022	381 aa	Predicted RBP	10.57	□□□□□ -0.72
CTNND1-238	ENST00000534647	TYK2	P29597	1187 aa		10.57	□□□□□ -0.72
CTNND1-238	ENST00000534647	RAB10	P61026	200 aa		10.57	□□□□□ -0.72
CTNND1-238	ENST00000534647	SORD	Q00796	357 aa		10.57	□□□□□ -0.72
CTNND1-238	ENST00000534647	TNFRSF17	Q02223	184 aa		10.57	□□□□□ -0.72
CTNND1-238	ENST00000534647	DUSP8	Q13202	625 aa		10.57	□□□□□ -0.72
CTNND1-238	ENST00000534647	SNTB1	Q13884	538 aa	Known RBP	10.57	□□□□□ -0.72
CTNND1-238	ENST00000534647	EBP	Q15125	230 aa	Known RBP	10.57	□□□□□ -0.72
CTNND1-238	ENST00000534647	GFOD2	Q3B7J2	385 aa		10.57	□□□□□ -0.72
CTNND1-238	ENST00000534647	PRAMEF20	Q5VT98	475 aa		10.57	□□□□□ -0.72

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