RNA–Protein interactions for RNA: ENST00000534382.5

CTSB-231, Transcript of cathepsin B, human

TSL 4

Gene CTSB, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-231	ENST00000534382	CLHC1	Q8NHS4	586 aa		13.37	□□□□□ -0.27
CTSB-231	ENST00000534382	MGARP	Q8TDB4	240 aa		13.37	□□□□□ -0.27
CTSB-231	ENST00000534382	PPCDC	Q96CD2	204 aa		13.37	□□□□□ -0.27
CTSB-231	ENST00000534382	HSPBAP1	Q96EW2	488 aa		13.37	□□□□□ -0.27
CTSB-231	ENST00000534382	LCOR	Q96JN0	433 aa	Predicted RBP	13.37	□□□□□ -0.27
CTSB-231	ENST00000534382	AMDHD1	Q96NU7	426 aa		13.37	□□□□□ -0.27
CTSB-231	ENST00000534382	ANKRA2	Q9H9E1	313 aa		13.37	□□□□□ -0.27
CTSB-231	ENST00000534382	ARGLU1	Q9NWB6	273 aa	Predicted RBP	13.37	□□□□□ -0.27
CTSB-231	ENST00000534382	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	13.37	□□□□□ -0.27
CTSB-231	ENST00000534382		A0A087WV62	115 aa		13.36	□□□□□ -0.27
CTSB-231	ENST00000534382	PLOD2	O00469	737 aa		13.36	□□□□□ -0.27
CTSB-231	ENST00000534382	TP53I11	O14683	189 aa		13.36	□□□□□ -0.27
CTSB-231	ENST00000534382	PDPK1	O15530	556 aa		13.36	□□□□□ -0.27
CTSB-231	ENST00000534382	HS6ST1	O60243	411 aa		13.36	□□□□□ -0.27
CTSB-231	ENST00000534382	PRPS2	P11908	318 aa		13.36	□□□□□ -0.27
CTSB-231	ENST00000534382	H2AFX	P16104	143 aa	Predicted RBP	13.36	□□□□□ -0.27
CTSB-231	ENST00000534382	NAGA	P17050	411 aa		13.36	□□□□□ -0.27
CTSB-231	ENST00000534382	ABCD3	P28288	659 aa		13.36	□□□□□ -0.27
CTSB-231	ENST00000534382	PIGA	P37287	484 aa		13.36	□□□□□ -0.27
CTSB-231	ENST00000534382	DNASE1L1	P49184	302 aa		13.36	□□□□□ -0.27
CTSB-231	ENST00000534382	FBXW4	P57775	412 aa		13.36	□□□□□ -0.27
CTSB-231	ENST00000534382	PPIA	P62937	165 aa	Known RBP	13.36	□□□□□ -0.27
CTSB-231	ENST00000534382	PLGLB1	Q02325	96 aa		13.36	□□□□□ -0.27
CTSB-231	ENST00000534382	PDE7A	Q13946	482 aa		13.36	□□□□□ -0.27
CTSB-231	ENST00000534382	RPS6KA2	Q15349	733 aa		13.36	□□□□□ -0.27
CTSB-231	ENST00000534382	PDCD2	Q16342	344 aa	Predicted RBP	13.36	□□□□□ -0.27
CTSB-231	ENST00000534382	NNAT	Q16517	81 aa		13.36	□□□□□ -0.27
CTSB-231	ENST00000534382	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	13.36	□□□□□ -0.27
CTSB-231	ENST00000534382	IL23R	Q5VWK5	629 aa		13.36	□□□□□ -0.27
CTSB-231	ENST00000534382	RGS9BP	Q6ZS82	235 aa		13.36	□□□□□ -0.27
CTSB-231	ENST00000534382	HDX	Q7Z353	690 aa		13.36	□□□□□ -0.27
CTSB-231	ENST00000534382	R3HCC1L	Q7Z5L2	792 aa	Known RBP	13.36	□□□□□ -0.27
CTSB-231	ENST00000534382	PRR22	Q8IZ63	422 aa		13.36	□□□□□ -0.27
CTSB-231	ENST00000534382	GHDC	Q8N2G8	530 aa		13.36	□□□□□ -0.27
CTSB-231	ENST00000534382	FBXW8	Q8N3Y1	598 aa		13.36	□□□□□ -0.27
CTSB-231	ENST00000534382	LIX1	Q8N485	282 aa		13.36	□□□□□ -0.27
CTSB-231	ENST00000534382	FNDC5	Q8NAU1	212 aa		13.36	□□□□□ -0.27
CTSB-231	ENST00000534382	SSC4D	Q8WTU2	575 aa		13.36	□□□□□ -0.27
CTSB-231	ENST00000534382	ARL8A	Q96BM9	186 aa		13.36	□□□□□ -0.27
CTSB-231	ENST00000534382	MTERF3	Q96E29	417 aa		13.36	□□□□□ -0.27
CTSB-231	ENST00000534382	TAS2R9	Q9NYW1	312 aa		13.36	□□□□□ -0.27
CTSB-231	ENST00000534382	SH3BP4	Q9P0V3	963 aa		13.36	□□□□□ -0.27
CTSB-231	ENST00000534382	ERRFI1	Q9UJM3	462 aa	Predicted RBP	13.36	□□□□□ -0.27
CTSB-231	ENST00000534382	CNOT11	Q9UKZ1	510 aa	Known RBP	13.36	□□□□□ -0.27
CTSB-231	ENST00000534382	GPR55	Q9Y2T6	319 aa	Predicted RBP	13.36	□□□□□ -0.27
CTSB-231	ENST00000534382	ANKRD33B	A6NCL7	494 aa		13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	FRG2C	A6NGY1	282 aa		13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	ACOT7	O00154	380 aa		13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	T	O15178	435 aa		13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	LRRTM2	O43300	516 aa		13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	COQ9	O75208	318 aa		13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	GLS	O94925	669 aa	Predicted RBP	13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	ABCB1	P08183	1280 aa	Predicted RBP	13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	IFI6	P09912	130 aa		13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	DDX5	P17844	614 aa	Known RBP	13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	RPL3	P39023	403 aa	Known RBP	13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	MC3R	P41968	323 aa		13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	RPP38	P78345	283 aa	Known RBP	13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	EMX2	Q04743	252 aa		13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	FOXO1	Q12778	655 aa		13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	MAD2L1	Q13257	205 aa	Predicted RBP	13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	SMU1	Q2TAY7	513 aa		13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	C4orf17	Q53FE4	359 aa		13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	ZNF385B	Q569K4	471 aa		13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	CMPK2	Q5EBM0	449 aa		13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	PRAMEF20	Q5VT98	475 aa		13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	ATG16L1	Q676U5	607 aa		13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	TMEM107	Q6UX40	140 aa		13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	SLC22A16	Q86VW1	577 aa		13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	TRIM42	Q8IWZ5	723 aa		13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	OR2L13	Q8N349	312 aa		13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	OR52N2	Q8NGI0	321 aa		13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	ZFP28	Q8NHY6	868 aa		13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	SPPL2A	Q8TCT8	520 aa		13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	CIDEC	Q96AQ7	238 aa	Predicted RBP	13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	ELP4	Q96EB1	424 aa		13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	ZBED6CL	Q96FA7	236 aa	Predicted RBP	13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	PPP1R36	Q96LQ0	422 aa		13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	VSTM2L	Q96N03	204 aa		13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	BTBD9	Q96Q07	612 aa		13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	SECISBP2	Q96T21	854 aa	Known RBP	13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	C1orf50	Q9BV19	199 aa		13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	TTTY12	Q9BZ98	90 aa		13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	IL1RL2	Q9HB29	575 aa		13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	FOLH1B	Q9HBA9	442 aa		13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	PROK2	Q9HC23	129 aa		13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	PNPO	Q9NVS9	261 aa		13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	THAP1	Q9NVV9	213 aa		13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	ATP6V1H	Q9UI12	483 aa		13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	C19orf53	Q9UNZ5	99 aa	Predicted RBP	13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	EIF3L	Q9Y262	564 aa	Known RBP	13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	ZNF835	Q9Y2P0	537 aa		13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	LRRK2	Q5S007	2527 aa		13.35	□□□□□ -0.27
CTSB-231	ENST00000534382	USP9X	Q93008	2570 aa	Predicted RBP	13.34	□□□□□ -0.27
CTSB-231	ENST00000534382		A0A1B0GUH1	482 aa		13.34	□□□□□ -0.27
CTSB-231	ENST00000534382	WIPF3	A6NGB9	483 aa		13.34	□□□□□ -0.27
CTSB-231	ENST00000534382	FAM166B	A8MTA8	275 aa		13.34	□□□□□ -0.27
CTSB-231	ENST00000534382	UPK1A	O00322	258 aa		13.34	□□□□□ -0.27
CTSB-231	ENST00000534382	SCAMP2	O15127	329 aa	Known RBP	13.34	□□□□□ -0.27

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