RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 PRPS2P11908 318 aa9.05□□□□□ -0.96
NUP98-220ENST00000533346 DDX5P17844 614 aaKnown RBP9.05□□□□□ -0.96
NUP98-220ENST00000533346 AGAP20933 346 aa9.05□□□□□ -0.96
NUP98-220ENST00000533346 TACR1P25103 407 aa9.05□□□□□ -0.96
NUP98-220ENST00000533346 ABCD3P28288 659 aa9.05□□□□□ -0.96
NUP98-220ENST00000533346 MAPK1P28482 360 aa9.05□□□□□ -0.96
NUP98-220ENST00000533346 RPL3P39023 403 aaKnown RBP9.05□□□□□ -0.96
NUP98-220ENST00000533346 MAP3K8P41279 467 aa9.05□□□□□ -0.96
NUP98-220ENST00000533346 ST13P50502 369 aaKnown RBP9.05□□□□□ -0.96
NUP98-220ENST00000533346 NR0B1P51843 470 aaKnown RBP9.05□□□□□ -0.96
NUP98-220ENST00000533346 ABCE1P61221 599 aaKnown RBP9.05□□□□□ -0.96
NUP98-220ENST00000533346 SRSF11Q05519 484 aaKnown RBP9.05□□□□□ -0.96
NUP98-220ENST00000533346 CT45A2Q5DJT8 189 aa9.05□□□□□ -0.96
NUP98-220ENST00000533346 CMPK2Q5EBM0 449 aa9.05□□□□□ -0.96
NUP98-220ENST00000533346 C6orf136Q5SQH8 315 aa9.05□□□□□ -0.96
NUP98-220ENST00000533346 SH2D4BQ5SQS7 431 aa9.05□□□□□ -0.96
NUP98-220ENST00000533346 CES4AQ5XG92 561 aa9.05□□□□□ -0.96
NUP98-220ENST00000533346 HLA-DQA1Q5Y7H0 255 aa9.05□□□□□ -0.96
NUP98-220ENST00000533346 ARHGAP11AQ6P4F7 1023 aa9.05□□□□□ -0.96
NUP98-220ENST00000533346 ZCCHC23Q6ZST2 131 aa9.05□□□□□ -0.96
NUP98-220ENST00000533346 SLC22A16Q86VW1 577 aa9.05□□□□□ -0.96
NUP98-220ENST00000533346 TICAM1Q8IUC6 712 aa9.05□□□□□ -0.96
NUP98-220ENST00000533346 FAM9CQ8IZT9 166 aa9.05□□□□□ -0.96
NUP98-220ENST00000533346 OR2L13Q8N349 312 aa9.05□□□□□ -0.96
NUP98-220ENST00000533346 FAM109AQ8N4B1 249 aa9.05□□□□□ -0.96
NUP98-220ENST00000533346 OR52R1Q8NGF1 315 aa9.05□□□□□ -0.96
NUP98-220ENST00000533346 PHF10Q8WUB8 498 aaKnown RBP9.05□□□□□ -0.96
NUP98-220ENST00000533346 HGDQ93099 445 aa9.05□□□□□ -0.96
NUP98-220ENST00000533346 EXOSC8Q96B26 276 aaKnown RBP9.05□□□□□ -0.96
NUP98-220ENST00000533346 EGLN2Q96KS0 407 aa9.05□□□□□ -0.96
NUP98-220ENST00000533346 VSTM2LQ96N03 204 aa9.05□□□□□ -0.96
NUP98-220ENST00000533346 SORT1Q99523 831 aa9.05□□□□□ -0.96
NUP98-220ENST00000533346 EBPLQ9BY08 206 aa9.05□□□□□ -0.96
NUP98-220ENST00000533346 TTTY12Q9BZ98 90 aa9.05□□□□□ -0.96
NUP98-220ENST00000533346 C20orf27Q9GZN8 174 aa9.05□□□□□ -0.96
NUP98-220ENST00000533346 NXF5Q9H1B4 397 aaKnown RBP9.05□□□□□ -0.96
NUP98-220ENST00000533346 MIEF1Q9NQG6 463 aa9.05□□□□□ -0.96
NUP98-220ENST00000533346 ACSS1Q9NUB1 689 aaPredicted RBP9.05□□□□□ -0.96
NUP98-220ENST00000533346 TAS2R9Q9NYW1 312 aa9.05□□□□□ -0.96
NUP98-220ENST00000533346 ATP6V1HQ9UI12 483 aa9.05□□□□□ -0.96
NUP98-220ENST00000533346 NPIPA1Q9UND3 350 aa9.05□□□□□ -0.96
NUP98-220ENST00000533346 C19orf53Q9UNZ5 99 aaPredicted RBP9.05□□□□□ -0.96
NUP98-220ENST00000533346 MAPRE3Q9UPY8 281 aa9.05□□□□□ -0.96
NUP98-220ENST00000533346 DTX4Q9Y2E6 619 aa9.05□□□□□ -0.96
NUP98-220ENST00000533346 OR6C70A6NIJ9 312 aa9.04□□□□□ -0.96
NUP98-220ENST00000533346 TMEM233B4DJY2 109 aa9.04□□□□□ -0.96
NUP98-220ENST00000533346 LRRTM2O43300 516 aa9.04□□□□□ -0.96
NUP98-220ENST00000533346 ITM2AO43736 263 aa9.04□□□□□ -0.96
NUP98-220ENST00000533346 TSPAN2O60636 221 aa9.04□□□□□ -0.96
NUP98-220ENST00000533346 HCN1O60741 890 aa9.04□□□□□ -0.96
NUP98-220ENST00000533346 SLC19A2O60779 497 aa9.04□□□□□ -0.96
NUP98-220ENST00000533346 COQ9O75208 318 aa9.04□□□□□ -0.96
NUP98-220ENST00000533346 BCKDHAP12694 445 aa9.04□□□□□ -0.96
NUP98-220ENST00000533346 GP1BBP13224 206 aa9.04□□□□□ -0.96
NUP98-220ENST00000533346 CASP3P42574 277 aa9.04□□□□□ -0.96
NUP98-220ENST00000533346 RPL14P50914 215 aaKnown RBP9.04□□□□□ -0.96
NUP98-220ENST00000533346 PNLIPRP2P54317 469 aa9.04□□□□□ -0.96
NUP98-220ENST00000533346 WDR4P57081 412 aaKnown RBP9.04□□□□□ -0.96
NUP98-220ENST00000533346 KCNK10P57789 538 aa9.04□□□□□ -0.96
NUP98-220ENST00000533346 PPIAP62937 165 aaKnown RBP9.04□□□□□ -0.96
NUP98-220ENST00000533346 MRPS35P82673 323 aaKnown RBP9.04□□□□□ -0.96
NUP98-220ENST00000533346 PSG6Q00889 435 aa9.04□□□□□ -0.96
NUP98-220ENST00000533346 EMX2Q04743 252 aa9.04□□□□□ -0.96
NUP98-220ENST00000533346 MAD2L1Q13257 205 aaPredicted RBP9.04□□□□□ -0.96
NUP98-220ENST00000533346 CASP8Q14790 479 aa9.04□□□□□ -0.96
NUP98-220ENST00000533346 LTB4RQ15722 352 aa9.04□□□□□ -0.96
NUP98-220ENST00000533346 CHI3L2Q15782 390 aa9.04□□□□□ -0.96
NUP98-220ENST00000533346 EXOSC6Q5RKV6 272 aaKnown RBP9.04□□□□□ -0.96
NUP98-220ENST00000533346 AGBL2Q5U5Z8 902 aa9.04□□□□□ -0.96
NUP98-220ENST00000533346 HIST2H2BCQ6DN03 193 aa9.04□□□□□ -0.96
NUP98-220ENST00000533346 SLC30A6Q6NXT4 461 aa9.04□□□□□ -0.96
NUP98-220ENST00000533346 FAM47EQ6ZV65 393 aa9.04□□□□□ -0.96
NUP98-220ENST00000533346 R3HCC1LQ7Z5L2 792 aaKnown RBP9.04□□□□□ -0.96
NUP98-220ENST00000533346 CAMKMTQ7Z624 323 aa9.04□□□□□ -0.96
NUP98-220ENST00000533346 FGD2Q7Z6J4 655 aa9.04□□□□□ -0.96
NUP98-220ENST00000533346 SLC34A3Q8N130 599 aa9.04□□□□□ -0.96
NUP98-220ENST00000533346 SIMC1Q8NDZ2 872 aa9.04□□□□□ -0.96
NUP98-220ENST00000533346 ADCY4Q8NFM4 1077 aa9.04□□□□□ -0.96
NUP98-220ENST00000533346 OR7G2Q8NG99 324 aa9.04□□□□□ -0.96
NUP98-220ENST00000533346 OR10G3Q8NGC4 313 aa9.04□□□□□ -0.96
NUP98-220ENST00000533346 OR52N2Q8NGI0 321 aa9.04□□□□□ -0.96
NUP98-220ENST00000533346 OR9A2Q8NGT5 310 aa9.04□□□□□ -0.96
NUP98-220ENST00000533346 PSMA8Q8TAA3 256 aa9.04□□□□□ -0.96
NUP98-220ENST00000533346 FAM57AQ8TBR7 257 aa9.04□□□□□ -0.96
NUP98-220ENST00000533346 COQ8BQ96D53 544 aa9.04□□□□□ -0.96
NUP98-220ENST00000533346 ELP4Q96EB1 424 aa9.04□□□□□ -0.96
NUP98-220ENST00000533346 TMEM41AQ96HV5 264 aa9.04□□□□□ -0.96
NUP98-220ENST00000533346 C3orf30Q96M34 536 aa9.04□□□□□ -0.96
NUP98-220ENST00000533346 AMDHD1Q96NU7 426 aa9.04□□□□□ -0.96
NUP98-220ENST00000533346 BBS4Q96RK4 519 aa9.04□□□□□ -0.96
NUP98-220ENST00000533346 GAL3ST4Q96RP7 486 aa9.04□□□□□ -0.96
NUP98-220ENST00000533346 LMF2Q9BU23 707 aaKnown RBP9.04□□□□□ -0.96
NUP98-220ENST00000533346 ITPAQ9BY32 194 aa9.04□□□□□ -0.96
NUP98-220ENST00000533346 UBQLN3Q9H347 655 aa9.04□□□□□ -0.96
NUP98-220ENST00000533346 GLIPR2Q9H4G4 154 aa9.04□□□□□ -0.96
NUP98-220ENST00000533346 ZFP64Q9NPA5 681 aa9.04□□□□□ -0.96
NUP98-220ENST00000533346 TUBA8Q9NY65 449 aaPredicted RBP9.04□□□□□ -0.96
NUP98-220ENST00000533346 BCAP29Q9UHQ4 241 aa9.04□□□□□ -0.96
NUP98-220ENST00000533346 BOKQ9UMX3 212 aaPredicted RBP9.04□□□□□ -0.96
NUP98-220ENST00000533346 PTGDR2Q9Y5Y4 395 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms