RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 HORMAD2Q8N7B1 307 aa17.3■□□□□ 0.36
SMPD1-208ENST00000533123 SUN3Q8TAQ9 357 aa17.3■□□□□ 0.36
SMPD1-208ENST00000533123 ADAMTS18Q8TE60 1221 aa17.3■□□□□ 0.36
SMPD1-208ENST00000533123 TMBIM1Q969X1 311 aa17.3■□□□□ 0.36
SMPD1-208ENST00000533123 HSH2DQ96JZ2 352 aa17.3■□□□□ 0.36
SMPD1-208ENST00000533123 ZNF681Q96N22 645 aa17.3■□□□□ 0.36
SMPD1-208ENST00000533123 ASPSCR1Q9BZE9 553 aa17.3■□□□□ 0.36
SMPD1-208ENST00000533123 CTSFQ9UBX1 484 aa17.3■□□□□ 0.36
SMPD1-208ENST00000533123 RAB26Q9ULW5 256 aa17.3■□□□□ 0.36
SMPD1-208ENST00000533123 ENTPD4Q9Y227 616 aa17.3■□□□□ 0.36
SMPD1-208ENST00000533123 MRPS33Q9Y291 106 aaKnown RBP17.3■□□□□ 0.36
SMPD1-208ENST00000533123 PCDHGB5Q9Y5G0 923 aa17.3■□□□□ 0.36
SMPD1-208ENST00000533123 MAGED1Q9Y5V3 778 aaPredicted RBP17.3■□□□□ 0.36
SMPD1-208ENST00000533123 PRSS23O95084 383 aa17.29■□□□□ 0.36
SMPD1-208ENST00000533123 BMP10O95393 424 aa17.29■□□□□ 0.36
SMPD1-208ENST00000533123 OPN1SWP03999 348 aa17.29■□□□□ 0.36
SMPD1-208ENST00000533123 CCT3P49368 545 aaKnown RBP17.29■□□□□ 0.36
SMPD1-208ENST00000533123 FOXL2P58012 376 aa17.29■□□□□ 0.36
SMPD1-208ENST00000533123 TP53BP2Q13625 1128 aa17.29■□□□□ 0.36
SMPD1-208ENST00000533123 MLC1Q15049 377 aa17.29■□□□□ 0.36
SMPD1-208ENST00000533123 CNPY1Q3B7I2 92 aa17.29■□□□□ 0.36
SMPD1-208ENST00000533123 CBLL1Q75N03 491 aa17.29■□□□□ 0.36
SMPD1-208ENST00000533123 C6orf120Q7Z4R8 191 aa17.29■□□□□ 0.36
SMPD1-208ENST00000533123 EGFL6Q8IUX8 553 aa17.29■□□□□ 0.36
SMPD1-208ENST00000533123 ZC3H7AQ8IWR0 971 aaKnown RBP17.29■□□□□ 0.36
SMPD1-208ENST00000533123 ZNF595Q8IYB9 648 aa17.29■□□□□ 0.36
SMPD1-208ENST00000533123 PRSS58Q8IYP2 241 aa17.29■□□□□ 0.36
SMPD1-208ENST00000533123 PSMA8Q8TAA3 256 aa17.29■□□□□ 0.36
SMPD1-208ENST00000533123 ANKRD9Q96BM1 317 aaPredicted RBP17.29■□□□□ 0.36
SMPD1-208ENST00000533123 TPD52L3Q96J77 140 aa17.29■□□□□ 0.36
SMPD1-208ENST00000533123 MAGED4Q96JG8 741 aa17.29■□□□□ 0.36
SMPD1-208ENST00000533123 PRDM9Q9NQV7 894 aa17.29■□□□□ 0.36
SMPD1-208ENST00000533123 GIMAP4Q9NUV9 329 aa17.29■□□□□ 0.36
SMPD1-208ENST00000533123 DLL3Q9NYJ7 618 aa17.29■□□□□ 0.36
SMPD1-208ENST00000533123 RPS6KA6Q9UK32 745 aa17.29■□□□□ 0.36
SMPD1-208ENST00000533123 AHCTF1Q8WYP5 2266 aa17.29■□□□□ 0.36
SMPD1-208ENST00000533123 CCDC88CQ9P219 2028 aa17.29■□□□□ 0.36
SMPD1-208ENST00000533123 PIEZO1Q92508 2521 aa17.29■□□□□ 0.36
SMPD1-208ENST00000533123 MYO1GB0I1T2 1018 aa17.29■□□□□ 0.36
SMPD1-208ENST00000533123 C9orf172C9J069 976 aa17.29■□□□□ 0.36
SMPD1-208ENST00000533123 DLGAP1O14490 977 aa17.29■□□□□ 0.36
SMPD1-208ENST00000533123 CLDN4O14493 209 aa17.29■□□□□ 0.36
SMPD1-208ENST00000533123 RASAL1O95294 804 aa17.29■□□□□ 0.36
SMPD1-208ENST00000533123 GPR75O95800 540 aa17.29■□□□□ 0.36
SMPD1-208ENST00000533123 MAOAP21397 527 aa17.29■□□□□ 0.36
SMPD1-208ENST00000533123 PPP1R8Q12972 351 aaKnown RBP17.29■□□□□ 0.36
SMPD1-208ENST00000533123 MINDY4Q4G0A6 757 aa17.29■□□□□ 0.36
SMPD1-208ENST00000533123 MFSD4BQ5TF39 518 aa17.29■□□□□ 0.36
SMPD1-208ENST00000533123 FAM199XQ6PEV8 388 aaPredicted RBP17.29■□□□□ 0.36
SMPD1-208ENST00000533123 RAD21L1Q9H4I0 556 aa17.29■□□□□ 0.36
SMPD1-208ENST00000533123 SERHL2Q9H4I8 314 aa17.29■□□□□ 0.36
SMPD1-208ENST00000533123 TMEM38AQ9H6F2 299 aa17.29■□□□□ 0.36
SMPD1-208ENST00000533123 PRTFDC1Q9NRG1 225 aa17.29■□□□□ 0.36
SMPD1-208ENST00000533123 LANCL2Q9NS86 450 aa17.29■□□□□ 0.36
SMPD1-208ENST00000533123 ABCG2Q9UNQ0 655 aa17.29■□□□□ 0.36
SMPD1-208ENST00000533123 DCDC2BA2VCK2 349 aa17.28■□□□□ 0.36
SMPD1-208ENST00000533123 TMEM229AB2RXF0 380 aa17.28■□□□□ 0.36
SMPD1-208ENST00000533123 DENRO43583 198 aaKnown RBP17.28■□□□□ 0.36
SMPD1-208ENST00000533123 CSNK2A2P19784 350 aaPredicted RBP17.28■□□□□ 0.36
SMPD1-208ENST00000533123 HSPA13P48723 471 aa17.28■□□□□ 0.36
SMPD1-208ENST00000533123 DSTNP60981 165 aa17.28■□□□□ 0.36
SMPD1-208ENST00000533123 CDK6Q00534 326 aa17.28■□□□□ 0.36
SMPD1-208ENST00000533123 PDK3Q15120 406 aa17.28■□□□□ 0.36
SMPD1-208ENST00000533123 CEBPEQ15744 281 aa17.28■□□□□ 0.36
SMPD1-208ENST00000533123 CYBRD1Q53TN4 286 aa17.28■□□□□ 0.36
SMPD1-208ENST00000533123 OTUD3Q5T2D3 398 aaPredicted RBP17.28■□□□□ 0.36
SMPD1-208ENST00000533123 EIF3MQ7L2H7 374 aaKnown RBP17.28■□□□□ 0.36
SMPD1-208ENST00000533123 LAPTM4BQ86VI4 370 aa17.28■□□□□ 0.36
SMPD1-208ENST00000533123 ZDHHC21Q8IVQ6 265 aa17.28■□□□□ 0.36
SMPD1-208ENST00000533123 GALNT6Q8NCL4 622 aa17.28■□□□□ 0.36
SMPD1-208ENST00000533123 ADAMTS14Q8WXS8 1223 aa17.28■□□□□ 0.36
SMPD1-208ENST00000533123 RAB8BQ92930 207 aa17.28■□□□□ 0.36
SMPD1-208ENST00000533123 CNBD2Q96M20 576 aa17.28■□□□□ 0.36
SMPD1-208ENST00000533123 OR1F2PQ96R84 312 aa17.28■□□□□ 0.36
SMPD1-208ENST00000533123 DDA1Q9BW61 102 aa17.28■□□□□ 0.36
SMPD1-208ENST00000533123 MKKSQ9NPJ1 570 aaPredicted RBP17.28■□□□□ 0.36
SMPD1-208ENST00000533123 IFT80Q9P2H3 777 aaPredicted RBP17.28■□□□□ 0.36
SMPD1-208ENST00000533123 DNAJB9Q9UBS3 223 aa17.28■□□□□ 0.36
SMPD1-208ENST00000533123 ZNF639Q9UID6 485 aa17.28■□□□□ 0.36
SMPD1-208ENST00000533123 ASPMQ8IZT6 3477 aa17.28■□□□□ 0.36
SMPD1-208ENST00000533123 H0YJX3 145 aa17.28■□□□□ 0.36
SMPD1-208ENST00000533123 TGFBR3LH3BV60 316 aa17.28■□□□□ 0.36
SMPD1-208ENST00000533123 hCG_2039718K7EN88 272 aa17.28■□□□□ 0.36
SMPD1-208ENST00000533123 CTNSO60931 367 aa17.28■□□□□ 0.36
SMPD1-208ENST00000533123 STK17BO94768 372 aa17.28■□□□□ 0.36
SMPD1-208ENST00000533123 SEMG1P04279 462 aa17.28■□□□□ 0.36
SMPD1-208ENST00000533123 KLK3P07288 261 aaPredicted RBP17.28■□□□□ 0.36
SMPD1-208ENST00000533123 MPIP34949 423 aa17.28■□□□□ 0.36
SMPD1-208ENST00000533123 LIN52Q52LA3 116 aa17.28■□□□□ 0.36
SMPD1-208ENST00000533123 ISLR2Q6UXK2 745 aa17.28■□□□□ 0.36
SMPD1-208ENST00000533123 SHISA6Q6ZSJ9 500 aa17.28■□□□□ 0.36
SMPD1-208ENST00000533123 FKBP9P1Q75LS8 142 aa17.28■□□□□ 0.36
SMPD1-208ENST00000533123 RNF217Q8TC41 542 aa17.28■□□□□ 0.36
SMPD1-208ENST00000533123 ZPBPQ9BS86 351 aa17.28■□□□□ 0.36
SMPD1-208ENST00000533123 ZCCHC3Q9NUD5 404 aaKnown RBP17.28■□□□□ 0.36
SMPD1-208ENST00000533123 UBAP1Q9NZ09 502 aa17.28■□□□□ 0.36
SMPD1-208ENST00000533123 PTPRBP23467 1997 aa17.27■□□□□ 0.36
SMPD1-208ENST00000533123 A0A1B0GVG6 124 aa17.27■□□□□ 0.36
SMPD1-208ENST00000533123 TNFSF15O95150 251 aa17.27■□□□□ 0.36
SMPD1-208ENST00000533123 ARAFP10398 606 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms