RNA–Protein interactions for RNA: ENST00000532069.5

CLNS1A-211, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 898 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-211ENST00000532069 PRR31Q5SQ13 230 aa11.68□□□□□ -0.54
CLNS1A-211ENST00000532069 NCMAPQ5T1S8 102 aa11.68□□□□□ -0.54
CLNS1A-211ENST00000532069 ZNF549Q6P9A3 640 aa11.68□□□□□ -0.54
CLNS1A-211ENST00000532069 SEZ6L2Q6UXD5 910 aa11.68□□□□□ -0.54
CLNS1A-211ENST00000532069 STAC2Q6ZMT1 411 aa11.68□□□□□ -0.54
CLNS1A-211ENST00000532069 NUP54Q7Z3B4 507 aa11.68□□□□□ -0.54
CLNS1A-211ENST00000532069 GPSM1Q86YR5 675 aa11.68□□□□□ -0.54
CLNS1A-211ENST00000532069 CCDC170Q8IYT3 715 aa11.68□□□□□ -0.54
CLNS1A-211ENST00000532069 C17orf47Q8NEP4 570 aa11.68□□□□□ -0.54
CLNS1A-211ENST00000532069 STEAP2Q8NFT2 490 aa11.68□□□□□ -0.54
CLNS1A-211ENST00000532069 RAB3IL1Q8TBN0 382 aa11.68□□□□□ -0.54
CLNS1A-211ENST00000532069 RIT1Q92963 219 aa11.68□□□□□ -0.54
CLNS1A-211ENST00000532069 GFM2Q969S9 779 aaKnown RBP11.68□□□□□ -0.54
CLNS1A-211ENST00000532069 PPWD1Q96BP3 646 aaKnown RBP11.68□□□□□ -0.54
CLNS1A-211ENST00000532069 VPS39Q96JC1 886 aa11.68□□□□□ -0.54
CLNS1A-211ENST00000532069 NDNQ99608 321 aa11.68□□□□□ -0.54
CLNS1A-211ENST00000532069 USB1Q9BQ65 265 aaKnown RBP11.68□□□□□ -0.54
CLNS1A-211ENST00000532069 RPF2Q9H7B2 306 aaKnown RBP11.68□□□□□ -0.54
CLNS1A-211ENST00000532069 PRM3Q9NNZ6 103 aa11.68□□□□□ -0.54
CLNS1A-211ENST00000532069 WHRNQ9P202 907 aa11.68□□□□□ -0.54
CLNS1A-211ENST00000532069 DKKL1Q9UK85 242 aa11.68□□□□□ -0.54
CLNS1A-211ENST00000532069 SLC22A14Q9Y267 594 aa11.68□□□□□ -0.54
CLNS1A-211ENST00000532069 ICOSLGO75144 302 aa11.67□□□□□ -0.54
CLNS1A-211ENST00000532069 GALNSP34059 522 aa11.67□□□□□ -0.54
CLNS1A-211ENST00000532069 IL2P60568 153 aa11.67□□□□□ -0.54
CLNS1A-211ENST00000532069 BASP1P80723 227 aaKnown RBP11.67□□□□□ -0.54
CLNS1A-211ENST00000532069 DHX34Q14147 1143 aaKnown RBP11.67□□□□□ -0.54
CLNS1A-211ENST00000532069 SLBPQ14493 270 aaKnown RBP eCLIP11.67□□□□□ -0.54
CLNS1A-211ENST00000532069 WHAMMP3Q1A5X7 153 aa11.67□□□□□ -0.54
CLNS1A-211ENST00000532069 AP5B1Q2VPB7 878 aa11.67□□□□□ -0.54
CLNS1A-211ENST00000532069 PGGHGQ32M88 737 aa11.67□□□□□ -0.54
CLNS1A-211ENST00000532069 C6orf163Q5TEZ5 329 aa11.67□□□□□ -0.54
CLNS1A-211ENST00000532069 DENND6AQ8IWF6 608 aa11.67□□□□□ -0.54
CLNS1A-211ENST00000532069 LILRB1Q8NHL6 650 aaPredicted RBP11.67□□□□□ -0.54
CLNS1A-211ENST00000532069 GCDHQ92947 438 aaPredicted RBP11.67□□□□□ -0.54
CLNS1A-211ENST00000532069 LCORQ96JN0 433 aaPredicted RBP11.67□□□□□ -0.54
CLNS1A-211ENST00000532069 MAPKAP1Q9BPZ7 522 aa11.67□□□□□ -0.54
CLNS1A-211ENST00000532069 HDHD5Q9BXW7 423 aa11.67□□□□□ -0.54
CLNS1A-211ENST00000532069 PRDM7Q9NQW5 492 aa11.67□□□□□ -0.54
CLNS1A-211ENST00000532069 PLSCR4Q9NRQ2 329 aa11.67□□□□□ -0.54
CLNS1A-211ENST00000532069 HEY2Q9UBP5 337 aa11.67□□□□□ -0.54
CLNS1A-211ENST00000532069 TFR2Q9UP52 801 aa11.67□□□□□ -0.54
CLNS1A-211ENST00000532069 MAGEB16A2A368 324 aa11.66□□□□□ -0.54
CLNS1A-211ENST00000532069 CCDC151A5D8V7 595 aa11.66□□□□□ -0.54
CLNS1A-211ENST00000532069 HRKO00198 91 aa11.66□□□□□ -0.54
CLNS1A-211ENST00000532069 PPM1BO75688 479 aa11.66□□□□□ -0.54
CLNS1A-211ENST00000532069 PLGP00747 810 aaPredicted RBP11.66□□□□□ -0.54
CLNS1A-211ENST00000532069 PSMB1P20618 241 aaKnown RBP11.66□□□□□ -0.54
CLNS1A-211ENST00000532069 ABCD3P28288 659 aa11.66□□□□□ -0.54
CLNS1A-211ENST00000532069 BUD31P41223 144 aaPredicted RBP11.66□□□□□ -0.54
CLNS1A-211ENST00000532069 SLC1A2P43004 574 aa11.66□□□□□ -0.54
CLNS1A-211ENST00000532069 HNMTP50135 292 aa11.66□□□□□ -0.54
CLNS1A-211ENST00000532069 CTBP2P56545 445 aa11.66□□□□□ -0.54
CLNS1A-211ENST00000532069 SPA17Q15506 151 aa11.66□□□□□ -0.54
CLNS1A-211ENST00000532069 OASLQ15646 514 aaKnown RBP11.66□□□□□ -0.54
CLNS1A-211ENST00000532069 ALKBH2Q6NS38 261 aa11.66□□□□□ -0.54
CLNS1A-211ENST00000532069 TMEM64Q6YI46 380 aa11.66□□□□□ -0.54
CLNS1A-211ENST00000532069 PLCZ1Q86YW0 608 aa11.66□□□□□ -0.54
CLNS1A-211ENST00000532069 OR4N5Q8IXE1 308 aa11.66□□□□□ -0.54
CLNS1A-211ENST00000532069 UBQLNLQ8IYU4 475 aa11.66□□□□□ -0.54
CLNS1A-211ENST00000532069 ACOT4Q8N9L9 421 aa11.66□□□□□ -0.54
CLNS1A-211ENST00000532069 FIG4Q92562 907 aa11.66□□□□□ -0.54
CLNS1A-211ENST00000532069 ALG3Q92685 438 aa11.66□□□□□ -0.54
CLNS1A-211ENST00000532069 NAPGQ99747 312 aaPredicted RBP11.66□□□□□ -0.54
CLNS1A-211ENST00000532069 DESI2Q9BSY9 194 aa11.66□□□□□ -0.54
CLNS1A-211ENST00000532069 PINK1Q9BXM7 581 aa11.66□□□□□ -0.54
CLNS1A-211ENST00000532069 ZNF696Q9H7X3 374 aa11.66□□□□□ -0.54
CLNS1A-211ENST00000532069 MANSC1Q9H8J5 431 aa11.66□□□□□ -0.54
CLNS1A-211ENST00000532069 ZNF446Q9NWS9 450 aa11.66□□□□□ -0.54
CLNS1A-211ENST00000532069 CISD1Q9NZ45 108 aaKnown RBP11.66□□□□□ -0.54
CLNS1A-211ENST00000532069 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.66□□□□□ -0.54
CLNS1A-211ENST00000532069 PHF11Q9UIL8 331 aa11.66□□□□□ -0.54
CLNS1A-211ENST00000532069 CFL2Q9Y281 166 aa11.66□□□□□ -0.54
CLNS1A-211ENST00000532069 B3GALT5Q9Y2C3 310 aa11.66□□□□□ -0.54
CLNS1A-211ENST00000532069 EPN1Q9Y6I3 576 aaPredicted RBP11.66□□□□□ -0.54
CLNS1A-211ENST00000532069 V9GYY5 206 aaPredicted RBP11.66□□□□□ -0.54
CLNS1A-211ENST00000532069 TENM1Q9UKZ4 2725 aa11.66□□□□□ -0.54
CLNS1A-211ENST00000532069 SLC35F4A4IF30 521 aa11.65□□□□□ -0.54
CLNS1A-211ENST00000532069 MIF4GDA9UHW6 222 aaKnown RBP11.65□□□□□ -0.54
CLNS1A-211ENST00000532069 LINC01387J3KSC0 135 aa11.65□□□□□ -0.54
CLNS1A-211ENST00000532069 LIASO43766 372 aa11.65□□□□□ -0.54
CLNS1A-211ENST00000532069 ABCB1P08183 1280 aaPredicted RBP11.65□□□□□ -0.54
CLNS1A-211ENST00000532069 BMP4P12644 408 aa11.65□□□□□ -0.54
CLNS1A-211ENST00000532069 ATP5A1P25705 553 aaKnown RBP11.65□□□□□ -0.54
CLNS1A-211ENST00000532069 PAQR3Q6TCH7 311 aa11.65□□□□□ -0.54
CLNS1A-211ENST00000532069 EXOC3L1Q86VI1 746 aa11.65□□□□□ -0.54
CLNS1A-211ENST00000532069 C10orf105Q8TEF2 133 aa11.65□□□□□ -0.54
CLNS1A-211ENST00000532069 ZNF669Q96BR6 464 aaPredicted RBP11.65□□□□□ -0.54
CLNS1A-211ENST00000532069 C1orf159Q96HA4 380 aa11.65□□□□□ -0.54
CLNS1A-211ENST00000532069 CACNG6Q9BXT2 260 aa11.65□□□□□ -0.54
CLNS1A-211ENST00000532069 PRRG4Q9BZD6 226 aa11.65□□□□□ -0.54
CLNS1A-211ENST00000532069 RAB21Q9UL25 225 aa11.65□□□□□ -0.54
CLNS1A-211ENST00000532069 DTX4Q9Y2E6 619 aa11.65□□□□□ -0.54
CLNS1A-211ENST00000532069 PRAMEF25A6NGN4 478 aa11.64□□□□□ -0.55
CLNS1A-211ENST00000532069 FAM157AC9JC47 383 aa11.64□□□□□ -0.55
CLNS1A-211ENST00000532069 SCELO95171 688 aa11.64□□□□□ -0.55
CLNS1A-211ENST00000532069 CD8AP01732 235 aa11.64□□□□□ -0.55
CLNS1A-211ENST00000532069 APEHP13798 732 aaKnown RBP11.64□□□□□ -0.55
CLNS1A-211ENST00000532069 HIST1H1TP22492 207 aaPredicted RBP11.64□□□□□ -0.55
CLNS1A-211ENST00000532069 SSR2P43308 183 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms