RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 CSAG2Q9Y5P2 127 aa13.39□□□□□ -0.27
CPSF1-206ENST00000531480 HEMK1Q9Y5R4 338 aaPredicted RBP13.39□□□□□ -0.27
CPSF1-206ENST00000531480 PRRC2CQ9Y520 2896 aaKnown RBP13.38□□□□□ -0.27
CPSF1-206ENST00000531480 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.38□□□□□ -0.27
CPSF1-206ENST00000531480 PRSS51A0A1B0GVH4 220 aa13.38□□□□□ -0.27
CPSF1-206ENST00000531480 C2orf92A0A1B0GVN3 265 aa13.38□□□□□ -0.27
CPSF1-206ENST00000531480 A0A1W2PRB8 838 aa13.38□□□□□ -0.27
CPSF1-206ENST00000531480 DYTNA2CJ06 578 aa13.38□□□□□ -0.27
CPSF1-206ENST00000531480 TO15178 435 aa13.38□□□□□ -0.27
CPSF1-206ENST00000531480 SLC22A3O75751 556 aa13.38□□□□□ -0.27
CPSF1-206ENST00000531480 OR2J2O76002 312 aa13.38□□□□□ -0.27
CPSF1-206ENST00000531480 NEURL1O76050 574 aa13.38□□□□□ -0.27
CPSF1-206ENST00000531480 PLA2G2AP14555 144 aa13.38□□□□□ -0.27
CPSF1-206ENST00000531480 DRD5P21918 477 aa13.38□□□□□ -0.27
CPSF1-206ENST00000531480 CD96P40200 585 aa13.38□□□□□ -0.27
CPSF1-206ENST00000531480 PPICP45877 212 aa13.38□□□□□ -0.27
CPSF1-206ENST00000531480 HLCSP50747 726 aa13.38□□□□□ -0.27
CPSF1-206ENST00000531480 CDK9P50750 372 aaKnown RBP13.38□□□□□ -0.27
CPSF1-206ENST00000531480 DCAF7P61962 342 aa13.38□□□□□ -0.27
CPSF1-206ENST00000531480 KLRB1Q12918 225 aa13.38□□□□□ -0.27
CPSF1-206ENST00000531480 HSPB3Q12988 150 aa13.38□□□□□ -0.27
CPSF1-206ENST00000531480 FAM174BQ3ZCQ3 159 aa13.38□□□□□ -0.27
CPSF1-206ENST00000531480 SPANXN4Q5MJ08 99 aa13.38□□□□□ -0.27
CPSF1-206ENST00000531480 ZNF468Q5VIY5 522 aaPredicted RBP13.38□□□□□ -0.27
CPSF1-206ENST00000531480 SLC6A19Q695T7 634 aa13.38□□□□□ -0.27
CPSF1-206ENST00000531480 OR4F3Q6IEY1 312 aa13.38□□□□□ -0.27
CPSF1-206ENST00000531480 TMEM107Q6UX40 140 aa13.38□□□□□ -0.27
CPSF1-206ENST00000531480 C16orf47Q6ZP98 133 aaPredicted RBP13.38□□□□□ -0.27
CPSF1-206ENST00000531480 ZNF605Q86T29 641 aa13.38□□□□□ -0.27
CPSF1-206ENST00000531480 GPALPP1Q8IXQ4 340 aa13.38□□□□□ -0.27
CPSF1-206ENST00000531480 GOT1L1Q8NHS2 421 aaPredicted RBP13.38□□□□□ -0.27
CPSF1-206ENST00000531480 THAP3Q8WTV1 239 aaPredicted RBP13.38□□□□□ -0.27
CPSF1-206ENST00000531480 PNPLA2Q96AD5 504 aa13.38□□□□□ -0.27
CPSF1-206ENST00000531480 GIMAP5Q96F15 307 aa13.38□□□□□ -0.27
CPSF1-206ENST00000531480 ANKRA2Q9H9E1 313 aa13.38□□□□□ -0.27
CPSF1-206ENST00000531480 SLC52A3Q9NQ40 469 aa13.38□□□□□ -0.27
CPSF1-206ENST00000531480 FAM120CQ9NX05 1096 aaKnown RBP13.38□□□□□ -0.27
CPSF1-206ENST00000531480 TAS2R9Q9NYW1 312 aa13.38□□□□□ -0.27
CPSF1-206ENST00000531480 PLA2G3Q9NZ20 509 aa13.38□□□□□ -0.27
CPSF1-206ENST00000531480 BTNL2Q9UIR0 455 aa13.38□□□□□ -0.27
CPSF1-206ENST00000531480 B3GNT3Q9Y2A9 372 aa13.38□□□□□ -0.27
CPSF1-206ENST00000531480 GPR55Q9Y2T6 319 aaPredicted RBP13.38□□□□□ -0.27
CPSF1-206ENST00000531480 A0A0G2JND7 137 aa13.37□□□□□ -0.27
CPSF1-206ENST00000531480 WWP2O00308 870 aa13.37□□□□□ -0.27
CPSF1-206ENST00000531480 COQ9O75208 318 aa13.37□□□□□ -0.27
CPSF1-206ENST00000531480 SORBS2O94875 1100 aaKnown RBP13.37□□□□□ -0.27
CPSF1-206ENST00000531480 IL6P05231 212 aa13.37□□□□□ -0.27
CPSF1-206ENST00000531480 PGRP06401 933 aa13.37□□□□□ -0.27
CPSF1-206ENST00000531480 FBXO45P0C2W1 286 aa13.37□□□□□ -0.27
CPSF1-206ENST00000531480 CT45A8P0DMV1 189 aa13.37□□□□□ -0.27
CPSF1-206ENST00000531480 CT45A9P0DMV2 189 aa13.37□□□□□ -0.27
CPSF1-206ENST00000531480 SSR4P51571 173 aa13.37□□□□□ -0.27
CPSF1-206ENST00000531480 HBA1P69905 142 aa13.37□□□□□ -0.27
CPSF1-206ENST00000531480 PSPHP78330 225 aa13.37□□□□□ -0.27
CPSF1-206ENST00000531480 LRRC74AQ0VAA2 488 aa13.37□□□□□ -0.27
CPSF1-206ENST00000531480 TLR1Q15399 786 aa13.37□□□□□ -0.27
CPSF1-206ENST00000531480 ZNF791Q3KP31 576 aaPredicted RBP13.37□□□□□ -0.27
CPSF1-206ENST00000531480 CT45A2Q5DJT8 189 aa13.37□□□□□ -0.27
CPSF1-206ENST00000531480 ANXA8L1Q5VT79 327 aa13.37□□□□□ -0.27
CPSF1-206ENST00000531480 RPUSD3Q6P087 351 aaKnown RBP13.37□□□□□ -0.27
CPSF1-206ENST00000531480 MSANTD1Q6ZTZ1 278 aa13.37□□□□□ -0.27
CPSF1-206ENST00000531480 FUNDC1Q8IVP5 155 aa13.37□□□□□ -0.27
CPSF1-206ENST00000531480 DND1Q8IYX4 353 aaKnown RBP13.37□□□□□ -0.27
CPSF1-206ENST00000531480 MIER2Q8N344 545 aa13.37□□□□□ -0.27
CPSF1-206ENST00000531480 Q8NA96 180 aa13.37□□□□□ -0.27
CPSF1-206ENST00000531480 FAM120BQ96EK7 910 aaKnown RBP13.37□□□□□ -0.27
CPSF1-206ENST00000531480 THOC1Q96FV9 657 aaKnown RBP13.37□□□□□ -0.27
CPSF1-206ENST00000531480 SCMH1Q96GD3 660 aa13.37□□□□□ -0.27
CPSF1-206ENST00000531480 MARK4Q96L34 752 aa13.37□□□□□ -0.27
CPSF1-206ENST00000531480 RILPQ96NA2 401 aa13.37□□□□□ -0.27
CPSF1-206ENST00000531480 CCDC115Q96NT0 180 aa13.37□□□□□ -0.27
CPSF1-206ENST00000531480 UTP23Q9BRU9 249 aaKnown RBP13.37□□□□□ -0.27
CPSF1-206ENST00000531480 TMEM120AQ9BXJ8 343 aa13.37□□□□□ -0.27
CPSF1-206ENST00000531480 ITPAQ9BY32 194 aa13.37□□□□□ -0.27
CPSF1-206ENST00000531480 LIN28AQ9H9Z2 209 aaKnown RBP13.37□□□□□ -0.27
CPSF1-206ENST00000531480 SH2D2AQ9NP31 389 aa13.37□□□□□ -0.27
CPSF1-206ENST00000531480 BCAP29Q9UHQ4 241 aa13.37□□□□□ -0.27
CPSF1-206ENST00000531480 ANAPC2Q9UJX6 822 aa13.37□□□□□ -0.27
CPSF1-206ENST00000531480 COPG1Q9Y678 874 aaKnown RBP13.37□□□□□ -0.27
CPSF1-206ENST00000531480 GCN1Q92616 2671 aaKnown RBP13.37□□□□□ -0.27
CPSF1-206ENST00000531480 TRAV17A0A0B4J275 112 aa13.36□□□□□ -0.27
CPSF1-206ENST00000531480 FAM234BA2RU67 622 aa13.36□□□□□ -0.27
CPSF1-206ENST00000531480 FRG2CA6NGY1 282 aa13.36□□□□□ -0.27
CPSF1-206ENST00000531480 TTC36A6NLP5 189 aa13.36□□□□□ -0.27
CPSF1-206ENST00000531480 ACOX3O15254 700 aa13.36□□□□□ -0.27
CPSF1-206ENST00000531480 EMC8O43402 210 aa13.36□□□□□ -0.27
CPSF1-206ENST00000531480 C6orf47O95873 294 aa13.36□□□□□ -0.27
CPSF1-206ENST00000531480 NAGAP17050 411 aa13.36□□□□□ -0.27
CPSF1-206ENST00000531480 S100A3P33764 101 aa13.36□□□□□ -0.27
CPSF1-206ENST00000531480 CYB561P49447 251 aa13.36□□□□□ -0.27
CPSF1-206ENST00000531480 ARG2P78540 354 aa13.36□□□□□ -0.27
CPSF1-206ENST00000531480 PSG6Q00889 435 aa13.36□□□□□ -0.27
CPSF1-206ENST00000531480 RCAN2Q14206 197 aa13.36□□□□□ -0.27
CPSF1-206ENST00000531480 SQLEQ14534 574 aa13.36□□□□□ -0.27
CPSF1-206ENST00000531480 RPS6KA2Q15349 733 aa13.36□□□□□ -0.27
CPSF1-206ENST00000531480 PGS1Q32NB8 556 aa13.36□□□□□ -0.27
CPSF1-206ENST00000531480 NADK2Q4G0N4 442 aa13.36□□□□□ -0.27
CPSF1-206ENST00000531480 ZCCHC12Q6PEW1 402 aa13.36□□□□□ -0.27
CPSF1-206ENST00000531480 PAOXQ6QHF9 649 aa13.36□□□□□ -0.27
CPSF1-206ENST00000531480 CPSF7Q8N684 471 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms