RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 TCAIMQ8N3R3 496 aa17.13■□□□□ 0.33
SSRP1-204ENST00000529002 ZCCHC7Q8N3Z6 543 aaKnown RBP17.13■□□□□ 0.33
SSRP1-204ENST00000529002 HUS1BQ8NHY5 278 aa17.13■□□□□ 0.33
SSRP1-204ENST00000529002 SFXN2Q96NB2 322 aa17.13■□□□□ 0.33
SSRP1-204ENST00000529002 MTERF1Q99551 399 aaKnown RBP17.13■□□□□ 0.33
SSRP1-204ENST00000529002 PTBP2Q9UKA9 531 aaKnown RBP17.13■□□□□ 0.33
SSRP1-204ENST00000529002 LAMP3Q9UQV4 416 aa17.13■□□□□ 0.33
SSRP1-204ENST00000529002 LRRC14BA6NHZ5 514 aa17.12■□□□□ 0.33
SSRP1-204ENST00000529002 B4DXG7 233 aa17.12■□□□□ 0.33
SSRP1-204ENST00000529002 H0YC42 278 aa17.12■□□□□ 0.33
SSRP1-204ENST00000529002 PHGDHO43175 533 aaKnown RBP17.12■□□□□ 0.33
SSRP1-204ENST00000529002 CD5LO43866 347 aa17.12■□□□□ 0.33
SSRP1-204ENST00000529002 UGT2B11O75310 529 aa17.12■□□□□ 0.33
SSRP1-204ENST00000529002 CBR3O75828 277 aa17.12■□□□□ 0.33
SSRP1-204ENST00000529002 WISP3O95389 354 aaPredicted RBP17.12■□□□□ 0.33
SSRP1-204ENST00000529002 TP53P04637 393 aaPredicted RBP17.12■□□□□ 0.33
SSRP1-204ENST00000529002 EPB42P16452 691 aa17.12■□□□□ 0.33
SSRP1-204ENST00000529002 TPD52P55327 224 aaPredicted RBP17.12■□□□□ 0.33
SSRP1-204ENST00000529002 EEF1A1P68104 462 aaKnown RBP17.12■□□□□ 0.33
SSRP1-204ENST00000529002 SRSF2Q01130 221 aaKnown RBP17.12■□□□□ 0.33
SSRP1-204ENST00000529002 E2F2Q14209 437 aa17.12■□□□□ 0.33
SSRP1-204ENST00000529002 CYP1B1Q16678 543 aa17.12■□□□□ 0.33
SSRP1-204ENST00000529002 EEF1A1P5Q5VTE0 462 aa17.12■□□□□ 0.33
SSRP1-204ENST00000529002 OR5M10Q6IEU7 315 aa17.12■□□□□ 0.33
SSRP1-204ENST00000529002 OMA1Q96E52 524 aa17.12■□□□□ 0.33
SSRP1-204ENST00000529002 ZNF845Q96IR2 970 aaPredicted RBP17.12■□□□□ 0.33
SSRP1-204ENST00000529002 NAT9Q9BTE0 207 aa17.12■□□□□ 0.33
SSRP1-204ENST00000529002 DERL2Q9GZP9 239 aa17.12■□□□□ 0.33
SSRP1-204ENST00000529002 RBSNQ9H1K0 784 aa17.12■□□□□ 0.33
SSRP1-204ENST00000529002 ELOVL5Q9NYP7 299 aa17.12■□□□□ 0.33
SSRP1-204ENST00000529002 DLGAP4Q9Y2H0 992 aa17.12■□□□□ 0.33
SSRP1-204ENST00000529002 CADP27708 2225 aa17.11■□□□□ 0.33
SSRP1-204ENST00000529002 A0A0A6YYD5 115 aa17.11■□□□□ 0.33
SSRP1-204ENST00000529002 SLC22A20A6NK97 555 aa17.11■□□□□ 0.33
SSRP1-204ENST00000529002 DNALI1O14645 258 aaPredicted RBP17.11■□□□□ 0.33
SSRP1-204ENST00000529002 S1PR1P21453 382 aa17.11■□□□□ 0.33
SSRP1-204ENST00000529002 GALNSP34059 522 aa17.11■□□□□ 0.33
SSRP1-204ENST00000529002 BSGP35613 385 aa17.11■□□□□ 0.33
SSRP1-204ENST00000529002 PCYT1AP49585 367 aa17.11■□□□□ 0.33
SSRP1-204ENST00000529002 CLDN15P56746 228 aa17.11■□□□□ 0.33
SSRP1-204ENST00000529002 EXOSC7Q15024 291 aaKnown RBP17.11■□□□□ 0.33
SSRP1-204ENST00000529002 EXOC3L2Q2M3D2 409 aa17.11■□□□□ 0.33
SSRP1-204ENST00000529002 STEAP4Q687X5 459 aa17.11■□□□□ 0.33
SSRP1-204ENST00000529002 FAM111BQ6SJ93 734 aa17.11■□□□□ 0.33
SSRP1-204ENST00000529002 SLC39A3Q9BRY0 314 aa17.11■□□□□ 0.33
SSRP1-204ENST00000529002 ITPAQ9BY32 194 aa17.11■□□□□ 0.33
SSRP1-204ENST00000529002 RYDENQ9NUL5 291 aaKnown RBP17.11■□□□□ 0.33
SSRP1-204ENST00000529002 RNF112Q9ULX5 631 aa17.11■□□□□ 0.33
SSRP1-204ENST00000529002 PRAMEF25A6NGN4 478 aa17.1■□□□□ 0.33
SSRP1-204ENST00000529002 HS3ST1O14792 307 aa17.1■□□□□ 0.33
SSRP1-204ENST00000529002 TLX2O43763 284 aaPredicted RBP17.1■□□□□ 0.33
SSRP1-204ENST00000529002 CRHP06850 196 aa17.1■□□□□ 0.33
SSRP1-204ENST00000529002 FAM58BPP0C7Q3 252 aa17.1■□□□□ 0.33
SSRP1-204ENST00000529002 CCDC166P0CW27 439 aa17.1■□□□□ 0.33
SSRP1-204ENST00000529002 CD1DP15813 335 aa17.1■□□□□ 0.33
SSRP1-204ENST00000529002 NT5EP21589 574 aa17.1■□□□□ 0.33
SSRP1-204ENST00000529002 TBXA2RP21731 343 aa17.1■□□□□ 0.33
SSRP1-204ENST00000529002 ACVR1BP36896 505 aa17.1■□□□□ 0.33
SSRP1-204ENST00000529002 CHRFAM7AQ494W8 412 aa17.1■□□□□ 0.33
SSRP1-204ENST00000529002 TMEM81Q6P7N7 255 aa17.1■□□□□ 0.33
SSRP1-204ENST00000529002 SH2D5Q6ZV89 423 aa17.1■□□□□ 0.33
SSRP1-204ENST00000529002 NUP54Q7Z3B4 507 aa17.1■□□□□ 0.33
SSRP1-204ENST00000529002 ANKMY2Q8IV38 441 aa17.1■□□□□ 0.33
SSRP1-204ENST00000529002 PDPRQ8NCN5 879 aa17.1■□□□□ 0.33
SSRP1-204ENST00000529002 PLPPR2Q96GM1 343 aa17.1■□□□□ 0.33
SSRP1-204ENST00000529002 CD244Q9BZW8 370 aa17.1■□□□□ 0.33
SSRP1-204ENST00000529002 MTO1Q9Y2Z2 717 aaKnown RBP17.1■□□□□ 0.33
SSRP1-204ENST00000529002 FRG2CA6NGY1 282 aa17.09■□□□□ 0.33
SSRP1-204ENST00000529002 HAX1O00165 279 aa17.09■□□□□ 0.33
SSRP1-204ENST00000529002 ZIC3O60481 467 aa17.09■□□□□ 0.33
SSRP1-204ENST00000529002 CDH16O75309 829 aa17.09■□□□□ 0.33
SSRP1-204ENST00000529002 RHOXF2BP0C7M4 288 aa17.09■□□□□ 0.33
SSRP1-204ENST00000529002 PIK3R1P27986 724 aa17.09■□□□□ 0.33
SSRP1-204ENST00000529002 SRD5A2P31213 254 aa17.09■□□□□ 0.33
SSRP1-204ENST00000529002 CDKN1AP38936 164 aa17.09■□□□□ 0.33
SSRP1-204ENST00000529002 SUCLG1P53597 346 aaKnown RBP17.09■□□□□ 0.33
SSRP1-204ENST00000529002 B3GALT5-AS1P59052 145 aa17.09■□□□□ 0.33
SSRP1-204ENST00000529002 PLCXD2Q0VAA5 305 aa17.09■□□□□ 0.33
SSRP1-204ENST00000529002 PPP1R7Q15435 360 aa17.09■□□□□ 0.33
SSRP1-204ENST00000529002 BEX5Q5H9J7 111 aa17.09■□□□□ 0.33
SSRP1-204ENST00000529002 AAGABQ6PD74 315 aa17.09■□□□□ 0.33
SSRP1-204ENST00000529002 CYP20A1Q6UW02 462 aa17.09■□□□□ 0.33
SSRP1-204ENST00000529002 SCIMPQ6UWF3 145 aa17.09■□□□□ 0.33
SSRP1-204ENST00000529002 PLCZ1Q86YW0 608 aa17.09■□□□□ 0.33
SSRP1-204ENST00000529002 ZNF611Q8N823 705 aa17.09■□□□□ 0.33
SSRP1-204ENST00000529002 AKAP1Q92667 903 aaKnown RBP eCLIP17.09■□□□□ 0.33
SSRP1-204ENST00000529002 UBE2E3Q969T4 207 aa17.09■□□□□ 0.33
SSRP1-204ENST00000529002 ZBED6CLQ96FA7 236 aaPredicted RBP17.09■□□□□ 0.33
SSRP1-204ENST00000529002 LYARQ9NX58 379 aaKnown RBP17.09■□□□□ 0.33
SSRP1-204ENST00000529002 ASIC3Q9UHC3 531 aa17.09■□□□□ 0.33
SSRP1-204ENST00000529002 GPRIN2O60269 458 aa17.08■□□□□ 0.32
SSRP1-204ENST00000529002 NDUFS7O75251 213 aa17.08■□□□□ 0.32
SSRP1-204ENST00000529002 NME6O75414 186 aaPredicted RBP17.08■□□□□ 0.32
SSRP1-204ENST00000529002 PTMSP20962 102 aa17.08■□□□□ 0.32
SSRP1-204ENST00000529002 HMGCS1Q01581 520 aa17.08■□□□□ 0.32
SSRP1-204ENST00000529002 MGAT5Q09328 741 aa17.08■□□□□ 0.32
SSRP1-204ENST00000529002 OR2A2Q6IF42 318 aa17.08■□□□□ 0.32
SSRP1-204ENST00000529002 GRHL2Q6ISB3 625 aa17.08■□□□□ 0.32
SSRP1-204ENST00000529002 CHMP1BQ7LBR1 199 aa17.08■□□□□ 0.32
SSRP1-204ENST00000529002 LRRC70Q7Z2Q7 622 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms