RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 MC3RP41968 323 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 GIPRP48546 466 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 UBE3AQ05086 875 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 GAB4Q2WGN9 574 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 CRTC2Q53ET0 693 aaPredicted RBP7.02□□□□□ -1.29
C11orf54-207ENST00000528288 C6orf132Q5T0Z8 1188 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 PSRC1Q6PGN9 363 aaPredicted RBP7.02□□□□□ -1.29
C11orf54-207ENST00000528288 UNC5DQ6UXZ4 953 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 IKBIPQ70UQ0 350 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 TBC1D19Q8N5T2 526 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 NANOGP1Q8N7R0 232 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 BBS1Q8NFJ9 593 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 OR8D4Q8NGM9 314 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 SMAP2Q8WU79 429 aaPredicted RBP7.02□□□□□ -1.29
C11orf54-207ENST00000528288 MTERF3Q96E29 417 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 CNRIP1Q96F85 164 aaPredicted RBP7.02□□□□□ -1.29
C11orf54-207ENST00000528288 DIRAS2Q96HU8 199 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 NELL2Q99435 816 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 TBX5Q99593 518 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 TTYH2Q9BSA4 534 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 TMED9Q9BVK6 235 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 HDHD5Q9BXW7 423 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 HOXD1Q9GZZ0 328 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 EPHX3Q9H6B9 360 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 NEK6Q9HC98 313 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 PRSS16Q9NQE7 514 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 SLC35C2Q9NQQ7 365 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 TXNL4BQ9NX01 149 aaKnown RBP7.02□□□□□ -1.29
C11orf54-207ENST00000528288 CNOT2Q9NZN8 540 aaKnown RBP7.02□□□□□ -1.29
C11orf54-207ENST00000528288 MARK1Q9P0L2 795 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 P2RX2Q9UBL9 471 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 MKLN1Q9UL63 735 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 SSR3Q9UNL2 185 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 CA5BQ9Y2D0 317 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 V9GYH0 126 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 A0A1B0GVC2 190 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 A6NIN4 97 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 TTC36A6NLP5 189 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 SLITRK5O94991 958 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 LALBAP00709 142 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 RFX2P48378 723 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 RORCP51449 518 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 TAS2R41P59536 307 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 DEFA1P59665 94 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 DEFA3P59666 94 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 ZNF791Q3KP31 576 aaPredicted RBP7.02□□□□□ -1.29
C11orf54-207ENST00000528288 MFSD4BQ5TF39 518 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 C12orf73Q69YU5 71 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 LINC00299Q6ZSB3 139 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 ETFBKMTQ8IXQ9 262 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 OR8J1Q8NGP2 316 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 C9orf43Q8TAL5 461 aaPredicted RBP7.02□□□□□ -1.29
C11orf54-207ENST00000528288 RNFT2Q96EX2 444 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 TXNDC15Q96J42 360 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 MENTQ9BUN1 341 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 MAFFQ9ULX9 164 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 ICKQ9UPZ9 632 aa7.02□□□□□ -1.29
C11orf54-207ENST00000528288 RPL36Q9Y3U8 105 aaKnown RBP7.02□□□□□ -1.29
C11orf54-207ENST00000528288 A0A087WUU8 490 aa7.01□□□□□ -1.29
C11orf54-207ENST00000528288 C2orf92A0A1B0GVN3 265 aa7.01□□□□□ -1.29
C11orf54-207ENST00000528288 HRO43593 1189 aa7.01□□□□□ -1.29
C11orf54-207ENST00000528288 DYRK3O43781 588 aa7.01□□□□□ -1.29
C11orf54-207ENST00000528288 PTTG1O95997 202 aa7.01□□□□□ -1.29
C11orf54-207ENST00000528288 GNSP15586 552 aa7.01□□□□□ -1.29
C11orf54-207ENST00000528288 PCSK2P16519 638 aa7.01□□□□□ -1.29
C11orf54-207ENST00000528288 TRHRP34981 398 aaPredicted RBP7.01□□□□□ -1.29
C11orf54-207ENST00000528288 TAS2R38P59533 333 aa7.01□□□□□ -1.29
C11orf54-207ENST00000528288 RUNX1T1Q06455 604 aa7.01□□□□□ -1.29
C11orf54-207ENST00000528288 FGL2Q14314 439 aa7.01□□□□□ -1.29
C11orf54-207ENST00000528288 TIMM50Q3ZCQ8 353 aa7.01□□□□□ -1.29
C11orf54-207ENST00000528288 METRNLQ641Q3 311 aa7.01□□□□□ -1.29
C11orf54-207ENST00000528288 NKAIN4Q8IVV8 208 aa7.01□□□□□ -1.29
C11orf54-207ENST00000528288 SLC30A8Q8IWU4 369 aa7.01□□□□□ -1.29
C11orf54-207ENST00000528288 BADQ92934 168 aa7.01□□□□□ -1.29
C11orf54-207ENST00000528288 MND1Q9BWT6 205 aa7.01□□□□□ -1.29
C11orf54-207ENST00000528288 ANKHQ9HCJ1 492 aa7.01□□□□□ -1.29
C11orf54-207ENST00000528288 PLSCR3Q9NRY6 295 aa7.01□□□□□ -1.29
C11orf54-207ENST00000528288 SEMA4GQ9NTN9 838 aa7.01□□□□□ -1.29
C11orf54-207ENST00000528288 STUB1Q9UNE7 303 aa7.01□□□□□ -1.29
C11orf54-207ENST00000528288 WBP11Q9Y2W2 641 aaKnown RBP7.01□□□□□ -1.29
C11orf54-207ENST00000528288 NPIPA5A0A0B4J1W7 369 aa7.01□□□□□ -1.29
C11orf54-207ENST00000528288 C17orf113A0A1B0GUU1 675 aa7.01□□□□□ -1.29
C11orf54-207ENST00000528288 LRIT2A6NDA9 550 aa7.01□□□□□ -1.29
C11orf54-207ENST00000528288 FAM170BA6NMN3 283 aa7.01□□□□□ -1.29
C11orf54-207ENST00000528288 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.01□□□□□ -1.29
C11orf54-207ENST00000528288 NPIPA7E9PJI5 369 aa7.01□□□□□ -1.29
C11orf54-207ENST00000528288 SLC9A3R1O14745 358 aaPredicted RBP7.01□□□□□ -1.29
C11orf54-207ENST00000528288 SLC31A1O15431 190 aa7.01□□□□□ -1.29
C11orf54-207ENST00000528288 MPZL2O60487 215 aa7.01□□□□□ -1.29
C11orf54-207ENST00000528288 TMCC2O75069 709 aa7.01□□□□□ -1.29
C11orf54-207ENST00000528288 MSL3P1P0C860 447 aa7.01□□□□□ -1.29
C11orf54-207ENST00000528288 NPIPA8P0DM63 369 aa7.01□□□□□ -1.29
C11orf54-207ENST00000528288 DDX6P26196 483 aaKnown RBP eCLIP7.01□□□□□ -1.29
C11orf54-207ENST00000528288 RFX3P48380 749 aa7.01□□□□□ -1.29
C11orf54-207ENST00000528288 REEP5Q00765 189 aa7.01□□□□□ -1.29
C11orf54-207ENST00000528288 LARS2Q15031 903 aaKnown RBP7.01□□□□□ -1.29
C11orf54-207ENST00000528288 ARHGEF6Q15052 776 aa7.01□□□□□ -1.29
C11orf54-207ENST00000528288 TOR1AIP1Q5JTV8 583 aa7.01□□□□□ -1.29
C11orf54-207ENST00000528288 TMEM31Q5JXX7 168 aa7.01□□□□□ -1.29
C11orf54-207ENST00000528288 ATAD3CQ5T2N8 411 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms