RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 LGALS12Q96DT0 336 aa6.88□□□□□ -1.31
CTNND1-218ENST00000528232 ZNF597Q96LX8 424 aa6.88□□□□□ -1.31
CTNND1-218ENST00000528232 KXD1Q9BQD3 176 aa6.88□□□□□ -1.31
CTNND1-218ENST00000528232 NDC1Q9BTX1 674 aa6.88□□□□□ -1.31
CTNND1-218ENST00000528232 ARL6Q9H0F7 186 aa6.88□□□□□ -1.31
CTNND1-218ENST00000528232 FBRSQ9HAH7 460 aa6.88□□□□□ -1.31
CTNND1-218ENST00000528232 SLC2A4RGQ9NR83 387 aa6.88□□□□□ -1.31
CTNND1-218ENST00000528232 KLHL42Q9P2K6 505 aa6.88□□□□□ -1.31
CTNND1-218ENST00000528232 POLHQ9Y253 713 aa6.88□□□□□ -1.31
CTNND1-218ENST00000528232 OR6C65A6NJZ3 312 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 SLC33A1O00400 549 aaPredicted RBP6.87□□□□□ -1.31
CTNND1-218ENST00000528232 TGOLN2O43493 480 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 PRAMEF2O60811 474 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 RNGTTO60942 597 aaKnown RBP6.87□□□□□ -1.31
CTNND1-218ENST00000528232 ZNF821O75541 412 aaPredicted RBP6.87□□□□□ -1.31
CTNND1-218ENST00000528232 TIMP1P01033 207 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 GPX3P22352 226 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 MASP1P48740 699 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 VEGFCP49767 419 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 DGKEP52429 567 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 PRKCDQ05655 676 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 LASP1Q14847 261 aaKnown RBP6.87□□□□□ -1.31
CTNND1-218ENST00000528232 SIGIRRQ6IA17 410 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 HTR3DQ70Z44 454 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 SLC39A11Q8N1S5 342 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 SYNPOQ8N3V7 929 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 SEMA6DQ8NFY4 1073 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 SH3YL1Q96HL8 342 aaPredicted RBP6.87□□□□□ -1.31
CTNND1-218ENST00000528232 WDR92Q96MX6 357 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 TBL1XR1Q9BZK7 514 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 BRD7Q9NPI1 651 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.87□□□□□ -1.31
CTNND1-218ENST00000528232 FAM118AQ9NWS6 357 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 KLHL21Q9UJP4 597 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 NUBP2Q9Y5Y2 271 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 COL5A3P25940 1745 aaPredicted RBP6.87□□□□□ -1.31
CTNND1-218ENST00000528232 HEPACAM2A8MVW5 462 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 ZNF670-ZNF695F2Z2N8 137 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 TLX2O43763 284 aaPredicted RBP6.87□□□□□ -1.31
CTNND1-218ENST00000528232 AHSA1O95433 338 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 KLF8O95600 359 aaPredicted RBP6.87□□□□□ -1.31
CTNND1-218ENST00000528232 PNPP00491 289 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 BMP1P13497 986 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 RHCEP18577 417 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 SLC6A6P31641 620 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 BMPR1AP36894 532 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 CDKN1CP49918 316 aaPredicted RBP6.87□□□□□ -1.31
CTNND1-218ENST00000528232 RPS15AP62244 130 aaKnown RBP6.87□□□□□ -1.31
CTNND1-218ENST00000528232 KCTD11Q693B1 232 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 ENPP6Q6UWR7 440 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 ZNF627Q7L945 461 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 TRIM46Q7Z4K8 759 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 GTF2H4Q92759 462 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 TBX5Q99593 518 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 TSSK6Q9BXA6 273 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 C12orf10Q9HB07 376 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 SLCO3A1Q9UIG8 710 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 LIPT1Q9Y234 373 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 ACTL7AQ9Y615 435 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 CEPT1Q9Y6K0 416 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 J3QR89 54 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 LRRTM2O43300 516 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 KAT7O95251 611 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 CD53P19397 219 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 CAPN3P20807 821 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 UBE2UQ5VVX9 321 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 OR4C11Q6IEV9 310 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 LETMD1Q6P1Q0 360 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 PET117Q6UWS5 81 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 C3P1Q6ZMU1 363 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 GID4Q8IVV7 300 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.87□□□□□ -1.31
CTNND1-218ENST00000528232 GHDCQ8N2G8 530 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 ATP6V1C2Q8NEY4 427 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 OR6K6Q8NGW6 343 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 OR2AJ1Q8NGZ0 328 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 MFSD8Q8NHS3 518 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 SUN3Q8TAQ9 357 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 NKD1Q969G9 470 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 SHDQ96IW2 340 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 OR51I1Q9H343 314 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 RHCGQ9UBD6 479 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 WDR45Q9Y484 360 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 E9PI62 339 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 H3BMQ9 156 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 CLIC3O95833 236 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 RETP07949 1114 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 FHP07954 510 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 OR12D1P0DN82 309 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 PIM1P11309 404 aaPredicted RBP6.87□□□□□ -1.31
CTNND1-218ENST00000528232 HOXD8P13378 290 aaPredicted RBP6.87□□□□□ -1.31
CTNND1-218ENST00000528232 EDNRAP25101 427 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 EVI2BP34910 448 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 DPP6P42658 865 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 OR1E2P47887 323 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 HTR6P50406 440 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 ERVK-25P63136 954 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 POU6F2P78424 691 aaPredicted RBP6.87□□□□□ -1.31
CTNND1-218ENST00000528232 LAPTM4AQ15012 233 aa6.87□□□□□ -1.31
CTNND1-218ENST00000528232 SEC23BQ15437 767 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms