RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 PLK5Q496M5 336 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 SYT14P1Q58G82 188 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 ARSIQ5FYB1 569 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 MPP7Q5T2T1 576 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 Q7L0L9 218 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 ABI3BPQ7Z7G0 1075 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 RASGRP3Q8IV61 690 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 OR4D11Q8NGI4 311 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 SLC5A11Q8WWX8 675 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 SLC9A6Q92581 669 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 UFD1Q92890 307 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 GLYATL1Q969I3 302 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 AP2M1Q96CW1 435 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 ZNF582Q96NG8 517 aaPredicted RBP11.82□□□□□ -0.52
CAPN1-208ENST00000527323 ZSCAN5AQ9BUG6 496 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 ING3Q9NXR8 418 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 GPR52Q9Y2T5 361 aa11.82□□□□□ -0.52
CAPN1-208ENST00000527323 SMLR1H3BR10 107 aa11.81□□□□□ -0.52
CAPN1-208ENST00000527323 M0R3H8 397 aa11.81□□□□□ -0.52
CAPN1-208ENST00000527323 AKR7A2O43488 359 aa11.81□□□□□ -0.52
CAPN1-208ENST00000527323 HPGDSO60760 199 aa11.81□□□□□ -0.52
CAPN1-208ENST00000527323 TSC22D2O75157 780 aa11.81□□□□□ -0.52
CAPN1-208ENST00000527323 HLA-DMAP28067 261 aa11.81□□□□□ -0.52
CAPN1-208ENST00000527323 MRPL28Q13084 256 aaKnown RBP11.81□□□□□ -0.52
CAPN1-208ENST00000527323 GRIN2CQ14957 1233 aa11.81□□□□□ -0.52
CAPN1-208ENST00000527323 FAM209AQ5JX71 171 aa11.81□□□□□ -0.52
CAPN1-208ENST00000527323 ZNF57Q68EA5 555 aaPredicted RBP11.81□□□□□ -0.52
CAPN1-208ENST00000527323 NXPE4Q6UWF7 544 aa11.81□□□□□ -0.52
CAPN1-208ENST00000527323 HTR3DQ70Z44 454 aa11.81□□□□□ -0.52
CAPN1-208ENST00000527323 IQCHQ86VS3 1027 aa11.81□□□□□ -0.52
CAPN1-208ENST00000527323 TRAPPC5Q8IUR0 188 aa11.81□□□□□ -0.52
CAPN1-208ENST00000527323 FAM26EQ8N5C1 309 aa11.81□□□□□ -0.52
CAPN1-208ENST00000527323 FAM181AQ8N9Y4 354 aa11.81□□□□□ -0.52
CAPN1-208ENST00000527323 EXOSC8Q96B26 276 aaKnown RBP11.81□□□□□ -0.52
CAPN1-208ENST00000527323 PLA2G2FQ9BZM2 168 aa11.81□□□□□ -0.52
CAPN1-208ENST00000527323 TBC1D17Q9HA65 648 aa11.81□□□□□ -0.52
CAPN1-208ENST00000527323 IRAK3Q9Y616 596 aa11.81□□□□□ -0.52
CAPN1-208ENST00000527323 LEFTY1O75610 366 aa11.81□□□□□ -0.52
CAPN1-208ENST00000527323 KLHL18O94889 574 aa11.81□□□□□ -0.52
CAPN1-208ENST00000527323 EPHX1P07099 455 aa11.81□□□□□ -0.52
CAPN1-208ENST00000527323 ALAS2P22557 587 aa11.81□□□□□ -0.52
CAPN1-208ENST00000527323 OPRD1P41143 372 aa11.81□□□□□ -0.52
CAPN1-208ENST00000527323 MAPK12P53778 367 aa11.81□□□□□ -0.52
CAPN1-208ENST00000527323 HYAL1Q12794 435 aa11.81□□□□□ -0.52
CAPN1-208ENST00000527323 COL9A2Q14055 689 aaPredicted RBP11.81□□□□□ -0.52
CAPN1-208ENST00000527323 BRAT1Q6PJG6 821 aa11.81□□□□□ -0.52
CAPN1-208ENST00000527323 ZNF730Q6ZMV8 503 aa11.81□□□□□ -0.52
CAPN1-208ENST00000527323 OLIG3Q7RTU3 272 aa11.81□□□□□ -0.52
CAPN1-208ENST00000527323 LHFPL3Q86UP9 236 aa11.81□□□□□ -0.52
CAPN1-208ENST00000527323 OR4K5Q8NGD3 323 aa11.81□□□□□ -0.52
CAPN1-208ENST00000527323 ZFAND1Q8TCF1 268 aa11.81□□□□□ -0.52
CAPN1-208ENST00000527323 TM9SF4Q92544 642 aa11.81□□□□□ -0.52
CAPN1-208ENST00000527323 RNFT2Q96EX2 444 aa11.81□□□□□ -0.52
CAPN1-208ENST00000527323 ZNF354BQ96LW1 612 aa11.81□□□□□ -0.52
CAPN1-208ENST00000527323 ABCG4Q9H172 646 aa11.81□□□□□ -0.52
CAPN1-208ENST00000527323 AHSPQ9NZD4 102 aa11.81□□□□□ -0.52
CAPN1-208ENST00000527323 HSPB11Q9Y547 144 aa11.81□□□□□ -0.52
CAPN1-208ENST00000527323 CELSR3Q9NYQ7 3312 aa11.81□□□□□ -0.52
CAPN1-208ENST00000527323 ZNF780AO75290 641 aaPredicted RBP11.8□□□□□ -0.52
CAPN1-208ENST00000527323 OR2B3O76000 313 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 NR2F1P10589 423 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 PPP3R1P63098 170 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 LSM11P83369 360 aaKnown RBP eCLIP11.8□□□□□ -0.52
CAPN1-208ENST00000527323 P2RY14Q15391 338 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 CEP78Q5JTW2 689 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 TP53I13Q8NBR0 393 aaPredicted RBP11.8□□□□□ -0.52
CAPN1-208ENST00000527323 SUN5Q8TC36 379 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 OTUB1Q96FW1 271 aaPredicted RBP11.8□□□□□ -0.52
CAPN1-208ENST00000527323 IL17FQ96PD4 163 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 HDHD5Q9BXW7 423 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 POLDIP3Q9BY77 421 aaKnown RBP11.8□□□□□ -0.52
CAPN1-208ENST00000527323 DOCK8Q8NF50 2099 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 C12orf71A8MTZ7 269 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 PDPK1O15530 556 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 NCR1O76036 304 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 IFI30P13284 250 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 MMP11P24347 488 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 KCNJ5P48544 419 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 GZMKP49863 264 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 P2RX3P56373 397 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 TCEA2Q15560 299 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 SYPL1Q16563 259 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 FLYWCH1Q4VC44 716 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 ZNF628Q5EBL2 1059 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 HENMT1Q5T8I9 393 aaKnown RBP11.8□□□□□ -0.52
CAPN1-208ENST00000527323 RFPL4BQ6ZWI9 263 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 ZER1Q7Z7L7 766 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 CPXM2Q8N436 756 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 ZNF557Q8N988 423 aaPredicted RBP11.8□□□□□ -0.52
CAPN1-208ENST00000527323 OR2A12Q8NGT7 310 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 OR9A1PQ8NGU1 263 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 OR5P2Q8WZ92 322 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 FGF14Q92915 247 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 NEURL3Q96EH8 262 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 TMED9Q9BVK6 235 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 RSPO3Q9BXY4 272 aaPredicted RBP11.8□□□□□ -0.52
CAPN1-208ENST00000527323 SLAMF7Q9NQ25 335 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 RBFOX1Q9NWB1 397 aaKnown RBP11.8□□□□□ -0.52
CAPN1-208ENST00000527323 NDOR1Q9UHB4 597 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 CLCA2Q9UQC9 943 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms