RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 LINC00471Q8N535 108 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 MRPL43Q8N983 215 aaKnown RBP10.98□□□□□ -0.65
LINC01001-201ENST00000526704 SYT14Q8NB59 555 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 OR8D4Q8NGM9 314 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 TMEM163Q8TC26 289 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 CXorf40AQ8TE69 158 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 RNFT2Q96EX2 444 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 PHOX2BQ99453 314 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 YIPF4Q9BSR8 244 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 PITHD1Q9GZP4 211 aaPredicted RBP10.98□□□□□ -0.65
LINC01001-201ENST00000526704 PCBD2Q9H0N5 130 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 RERGLQ9H628 205 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 BCL2L10Q9HD36 194 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 FGF20Q9NP95 211 aaPredicted RBP10.98□□□□□ -0.65
LINC01001-201ENST00000526704 SLC35C2Q9NQQ7 365 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 MRPS18AQ9NVS2 196 aaKnown RBP10.98□□□□□ -0.65
LINC01001-201ENST00000526704 TMEM129A0AVI4 362 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 SMIM30A4D0T7 59 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 A6NL46 340 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 ADH1CP00326 375 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 STATHP02808 62 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 RPN2P04844 631 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 PCCBP05166 539 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 TSPAN19P0C672 248 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 ALPPL2P10696 532 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 EPCAMP16422 314 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 MYL12AP19105 171 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 HSD17B2P37059 387 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 CD79BP40259 229 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 BUD31P41223 144 aaPredicted RBP10.98□□□□□ -0.65
LINC01001-201ENST00000526704 SSR2P43308 183 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 SLC9A3P48764 834 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 SMSP52788 366 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 TRA2BP62995 288 aaKnown RBP10.98□□□□□ -0.65
LINC01001-201ENST00000526704 SCN1BQ07699 218 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 PLK5Q496M5 336 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 KLHL22Q53GT1 634 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 ZNF697Q5TEC3 545 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 XKRXQ6PP77 449 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 QSOX2Q6ZRP7 698 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 SNX18Q96RF0 628 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 GPR52Q9Y2T5 361 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 C2orf16Q68DN1 1984 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 GLOD5A6NK44 160 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 MAN2B1O00754 1011 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 TFECO14948 347 aaPredicted RBP10.97□□□□□ -0.65
LINC01001-201ENST00000526704 PRODHO43272 600 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 EFCAB14O75071 495 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 UBXN7O94888 489 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 SERPIND1P05546 499 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 DRD2P14416 443 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 P2RY2P41231 377 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 CDK3Q00526 305 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 DUSP2Q05923 314 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 RAB40BQ12829 278 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 GAB4Q2WGN9 574 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 ZFP69Q49AA0 526 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 SLC36A4Q6YBV0 504 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 MRGPREQ86SM8 312 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 LAPTM4BQ86VI4 370 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 SUN3Q8TAQ9 357 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 GATAD2BQ8WXI9 593 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 DIRAS2Q96HU8 199 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 KCTD7Q96MP8 289 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 MED18Q9BUE0 208 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 KATNB1Q9BVA0 655 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 PRR14Q9BWN1 585 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 SLC22A4Q9H015 551 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 QRSL1Q9H0R6 528 aaKnown RBP10.97□□□□□ -0.65
LINC01001-201ENST00000526704 C11orf54Q9H0W9 315 aaPredicted RBP10.97□□□□□ -0.65
LINC01001-201ENST00000526704 KLHL31Q9H511 634 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 DDX28Q9NUL7 540 aaKnown RBP10.97□□□□□ -0.65
LINC01001-201ENST00000526704 A0A087WUU8 490 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 FAM172BPA6NC97 362 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 LRIT2A6NDA9 550 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 SEC14L5O43304 696 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 CLEC3AO75596 197 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 NTN1O95631 604 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 FHP07954 510 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 NR2F6P10588 404 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 GSTM3P21266 225 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 NTSP30990 170 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 RPS5P46782 204 aaKnown RBP10.97□□□□□ -0.65
LINC01001-201ENST00000526704 PRKAG1P54619 331 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 TAS2R38P59533 333 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 TPBGQ13641 420 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 ZNF234Q14588 700 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 LASP1Q14847 261 aaKnown RBP10.97□□□□□ -0.65
LINC01001-201ENST00000526704 ARHGEF6Q15052 776 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 DUSP6Q16828 381 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 ZNF750Q32MQ0 723 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 TBRG1Q3YBR2 411 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 MINDY4Q4G0A6 757 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 DDI2Q5TDH0 399 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 TMEM64Q6YI46 380 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 SHFQ7M4L6 423 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 ADCK2Q7Z695 626 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 TEX47Q8TBZ9 253 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 SLC9A6Q92581 669 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 ZFYVE19Q96K21 471 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms