RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 KIR3DL1P43629 444 aa11.96□□□□□ -0.49
SMPD1-202ENST00000526280 CYB561P49447 251 aa11.96□□□□□ -0.49
SMPD1-202ENST00000526280 HLCSP50747 726 aa11.96□□□□□ -0.49
SMPD1-202ENST00000526280 CDK9P50750 372 aaKnown RBP11.96□□□□□ -0.49
SMPD1-202ENST00000526280 PHC1P78364 1004 aa11.96□□□□□ -0.49
SMPD1-202ENST00000526280 TLR1Q15399 786 aa11.96□□□□□ -0.49
SMPD1-202ENST00000526280 PLEKHN1Q494U1 663 aaPredicted RBP11.96□□□□□ -0.49
SMPD1-202ENST00000526280 SPANXN4Q5MJ08 99 aa11.96□□□□□ -0.49
SMPD1-202ENST00000526280 HLA-DQA1Q5Y7H0 255 aa11.96□□□□□ -0.49
SMPD1-202ENST00000526280 SLC6A19Q695T7 634 aa11.96□□□□□ -0.49
SMPD1-202ENST00000526280 OR4F3Q6IEY1 312 aa11.96□□□□□ -0.49
SMPD1-202ENST00000526280 CGB2Q6NT52 195 aa11.96□□□□□ -0.49
SMPD1-202ENST00000526280 CCDC121Q6ZUS5 278 aa11.96□□□□□ -0.49
SMPD1-202ENST00000526280 MIER2Q8N344 545 aa11.96□□□□□ -0.49
SMPD1-202ENST00000526280 TMEM156Q8N614 296 aa11.96□□□□□ -0.49
SMPD1-202ENST00000526280 SLC15A4Q8N697 577 aa11.96□□□□□ -0.49
SMPD1-202ENST00000526280 GLB1L3Q8NCI6 653 aaPredicted RBP11.96□□□□□ -0.49
SMPD1-202ENST00000526280 PSMA8Q8TAA3 256 aa11.96□□□□□ -0.49
SMPD1-202ENST00000526280 PNPLA2Q96AD5 504 aa11.96□□□□□ -0.49
SMPD1-202ENST00000526280 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.96□□□□□ -0.49
SMPD1-202ENST00000526280 RYDENQ9NUL5 291 aaKnown RBP11.96□□□□□ -0.49
SMPD1-202ENST00000526280 DDX18Q9NVP1 670 aaKnown RBP11.96□□□□□ -0.49
SMPD1-202ENST00000526280 ANKRD10Q9NXR5 420 aa11.96□□□□□ -0.49
SMPD1-202ENST00000526280 TAS2R9Q9NYW1 312 aa11.96□□□□□ -0.49
SMPD1-202ENST00000526280 ZIM2Q9NZV7 527 aa11.96□□□□□ -0.49
SMPD1-202ENST00000526280 NTMQ9P121 344 aa11.96□□□□□ -0.49
SMPD1-202ENST00000526280 DTX4Q9Y2E6 619 aa11.96□□□□□ -0.49
SMPD1-202ENST00000526280 HEMK1Q9Y5R4 338 aaPredicted RBP11.96□□□□□ -0.49
SMPD1-202ENST00000526280 TRAV17A0A0B4J275 112 aa11.95□□□□□ -0.5
SMPD1-202ENST00000526280 A0A0G2JND7 137 aa11.95□□□□□ -0.5
SMPD1-202ENST00000526280 PRSS51A0A1B0GVH4 220 aa11.95□□□□□ -0.5
SMPD1-202ENST00000526280 CCT8L1PA6NM43 557 aa11.95□□□□□ -0.5
SMPD1-202ENST00000526280 COQ9O75208 318 aa11.95□□□□□ -0.5
SMPD1-202ENST00000526280 NME6O75414 186 aaPredicted RBP11.95□□□□□ -0.5
SMPD1-202ENST00000526280 NEURL1O76050 574 aa11.95□□□□□ -0.5
SMPD1-202ENST00000526280 OR6B1O95007 311 aa11.95□□□□□ -0.5
SMPD1-202ENST00000526280 NADKO95544 446 aaPredicted RBP11.95□□□□□ -0.5
SMPD1-202ENST00000526280 C6orf47O95873 294 aa11.95□□□□□ -0.5
SMPD1-202ENST00000526280 DRD5P21918 477 aa11.95□□□□□ -0.5
SMPD1-202ENST00000526280 S100A3P33764 101 aa11.95□□□□□ -0.5
SMPD1-202ENST00000526280 CASRP41180 1078 aa11.95□□□□□ -0.5
SMPD1-202ENST00000526280 SOX3P41225 446 aa11.95□□□□□ -0.5
SMPD1-202ENST00000526280 PPICP45877 212 aa11.95□□□□□ -0.5
SMPD1-202ENST00000526280 NR0B1P51843 470 aaKnown RBP11.95□□□□□ -0.5
SMPD1-202ENST00000526280 DCAF7P61962 342 aa11.95□□□□□ -0.5
SMPD1-202ENST00000526280 OC90Q02509 493 aaPredicted RBP11.95□□□□□ -0.5
SMPD1-202ENST00000526280 ZNF169Q14929 603 aaPredicted RBP11.95□□□□□ -0.5
SMPD1-202ENST00000526280 OR1C1Q15619 314 aa11.95□□□□□ -0.5
SMPD1-202ENST00000526280 FAM174BQ3ZCQ3 159 aa11.95□□□□□ -0.5
SMPD1-202ENST00000526280 ANXA8L1Q5VT79 327 aa11.95□□□□□ -0.5
SMPD1-202ENST00000526280 SPINK14Q6IE38 97 aa11.95□□□□□ -0.5
SMPD1-202ENST00000526280 OPN5Q6U736 354 aa11.95□□□□□ -0.5
SMPD1-202ENST00000526280 ZNF227Q86WZ6 799 aa11.95□□□□□ -0.5
SMPD1-202ENST00000526280 GPALPP1Q8IXQ4 340 aa11.95□□□□□ -0.5
SMPD1-202ENST00000526280 ZNF843Q8N446 348 aa11.95□□□□□ -0.5
SMPD1-202ENST00000526280 ANKS4BQ8N8V4 417 aa11.95□□□□□ -0.5
SMPD1-202ENST00000526280 Q8NA96 180 aa11.95□□□□□ -0.5
SMPD1-202ENST00000526280 MDS2Q8NDY4 140 aa11.95□□□□□ -0.5
SMPD1-202ENST00000526280 VPS37AQ8NEZ2 397 aa11.95□□□□□ -0.5
SMPD1-202ENST00000526280 SLC22A8Q8TCC7 542 aa11.95□□□□□ -0.5
SMPD1-202ENST00000526280 ASB15Q8WXK1 588 aa11.95□□□□□ -0.5
SMPD1-202ENST00000526280 MAGED4Q96JG8 741 aa11.95□□□□□ -0.5
SMPD1-202ENST00000526280 VSTM2LQ96N03 204 aa11.95□□□□□ -0.5
SMPD1-202ENST00000526280 RILPQ96NA2 401 aa11.95□□□□□ -0.5
SMPD1-202ENST00000526280 SIGLEC12Q96PQ1 595 aa11.95□□□□□ -0.5
SMPD1-202ENST00000526280 ZBTB18Q99592 522 aa11.95□□□□□ -0.5
SMPD1-202ENST00000526280 ITPAQ9BY32 194 aa11.95□□□□□ -0.5
SMPD1-202ENST00000526280 C3orf14Q9HBI5 128 aa11.95□□□□□ -0.5
SMPD1-202ENST00000526280 SIRT3Q9NTG7 399 aaPredicted RBP11.95□□□□□ -0.5
SMPD1-202ENST00000526280 LRFN1Q9P244 771 aa11.95□□□□□ -0.5
SMPD1-202ENST00000526280 ANAPC2Q9UJX6 822 aa11.95□□□□□ -0.5
SMPD1-202ENST00000526280 ERVK-11Q9UQG0 969 aa11.95□□□□□ -0.5
SMPD1-202ENST00000526280 GPR55Q9Y2T6 319 aaPredicted RBP11.95□□□□□ -0.5
SMPD1-202ENST00000526280 A8MVJ9 347 aa11.94□□□□□ -0.5
SMPD1-202ENST00000526280 C9JVG2 144 aa11.94□□□□□ -0.5
SMPD1-202ENST00000526280 EMC8O43402 210 aa11.94□□□□□ -0.5
SMPD1-202ENST00000526280 SNX3O60493 162 aa11.94□□□□□ -0.5
SMPD1-202ENST00000526280 IL6P05231 212 aa11.94□□□□□ -0.5
SMPD1-202ENST00000526280 PGRP06401 933 aa11.94□□□□□ -0.5
SMPD1-202ENST00000526280 ZFP36L2P47974 494 aaKnown RBP11.94□□□□□ -0.5
SMPD1-202ENST00000526280 ATP4BP51164 291 aa11.94□□□□□ -0.5
SMPD1-202ENST00000526280 DGKQP52824 942 aa11.94□□□□□ -0.5
SMPD1-202ENST00000526280 STX1BP61266 288 aa11.94□□□□□ -0.5
SMPD1-202ENST00000526280 HBA1P69905 142 aa11.94□□□□□ -0.5
SMPD1-202ENST00000526280 IRX1P78414 480 aaPredicted RBP11.94□□□□□ -0.5
SMPD1-202ENST00000526280 ZNF791Q3KP31 576 aaPredicted RBP11.94□□□□□ -0.5
SMPD1-202ENST00000526280 COLEC12Q5KU26 742 aa11.94□□□□□ -0.5
SMPD1-202ENST00000526280 METTL21CQ5VZV1 264 aa11.94□□□□□ -0.5
SMPD1-202ENST00000526280 PAOXQ6QHF9 649 aa11.94□□□□□ -0.5
SMPD1-202ENST00000526280 LYPD8Q6UX82 237 aa11.94□□□□□ -0.5
SMPD1-202ENST00000526280 IL20RBQ6UXL0 311 aa11.94□□□□□ -0.5
SMPD1-202ENST00000526280 C10orf67Q8IYJ2 551 aa11.94□□□□□ -0.5
SMPD1-202ENST00000526280 CLECL1Q8IZS7 167 aa11.94□□□□□ -0.5
SMPD1-202ENST00000526280 TAGAPQ8N103 731 aa11.94□□□□□ -0.5
SMPD1-202ENST00000526280 HORMAD2Q8N7B1 307 aa11.94□□□□□ -0.5
SMPD1-202ENST00000526280 NUP43Q8NFH3 380 aa11.94□□□□□ -0.5
SMPD1-202ENST00000526280 OR9I1Q8NGQ6 314 aa11.94□□□□□ -0.5
SMPD1-202ENST00000526280 LCORQ96JN0 433 aaPredicted RBP11.94□□□□□ -0.5
SMPD1-202ENST00000526280 BTBD9Q96Q07 612 aa11.94□□□□□ -0.5
SMPD1-202ENST00000526280 TMEM120AQ9BXJ8 343 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms