RNA–Protein interactions for RNA: ENST00000525950.5

BDNF-213, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-213ENST00000525950 GPSM3Q9Y4H4 160 aa7.55□□□□□ -1.2
BDNF-213ENST00000525950 HSPB11Q9Y547 144 aa7.55□□□□□ -1.2
BDNF-213ENST00000525950 HOXD10P28358 340 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 SSTR4P31391 388 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 RNF144AP50876 292 aaPredicted RBP7.54□□□□□ -1.2
BDNF-213ENST00000525950 DGKEP52429 567 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 MAPK12P53778 367 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 RAG2P55895 527 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 PER3P56645 1201 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 TRA2BP62995 288 aaKnown RBP7.54□□□□□ -1.2
BDNF-213ENST00000525950 ZNF155Q12901 538 aaPredicted RBP7.54□□□□□ -1.2
BDNF-213ENST00000525950 TSPAN31Q12999 210 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 GPNMBQ14956 572 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 Q6ZVL8 140 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 DPPA4Q7L190 304 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 DBF4BQ8NFT6 615 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 SCMH1Q96GD3 660 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 RADILQ96JH8 1075 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 TREX2Q9BQ50 279 aaPredicted RBP7.54□□□□□ -1.2
BDNF-213ENST00000525950 RIOK2Q9BVS4 552 aaKnown RBP7.54□□□□□ -1.2
BDNF-213ENST00000525950 PITHD1Q9GZP4 211 aaPredicted RBP7.54□□□□□ -1.2
BDNF-213ENST00000525950 C12orf10Q9HB07 376 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 ZNF334Q9HCZ1 680 aaPredicted RBP7.54□□□□□ -1.2
BDNF-213ENST00000525950 SLAMF7Q9NQ25 335 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 ADAM29Q9UKF5 820 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 CLCA3PQ9Y6N3 262 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 CARNS1A5YM72 827 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 ZSCAN5BA6NJL1 495 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 GABRPO00591 440 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 B4GALT2O60909 372 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 SLC22A5O76082 557 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 UBXN7O94888 489 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 URODP06132 367 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 INPP1P49441 399 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 ARFIP1P53367 373 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 GNA13Q14344 377 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 COL28A1Q2UY09 1125 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 AADACL4Q5VUY2 407 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 TNFAIP8L2Q6P589 184 aaPredicted RBP7.54□□□□□ -1.2
BDNF-213ENST00000525950 AMIGO1Q86WK6 493 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 LRRC28Q86X40 367 aaPredicted RBP7.54□□□□□ -1.2
BDNF-213ENST00000525950 KIF18BQ86Y91 864 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 KLHL36Q8N4N3 616 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 CELF5Q8N6W0 485 aaKnown RBP7.54□□□□□ -1.2
BDNF-213ENST00000525950 OR5M3Q8NGP4 307 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 TEX47Q8TBZ9 253 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 IGSF21Q96ID5 467 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 LINC00615Q96LM1 132 aaPredicted RBP7.54□□□□□ -1.2
BDNF-213ENST00000525950 CITED4Q96RK1 184 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 HDHD5Q9BXW7 423 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 RNF32Q9H0A6 362 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 SAP130Q9H0E3 1048 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 MARK1Q9P0L2 795 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 SH2B3Q9UQQ2 575 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 NCKAP1Q9Y2A7 1128 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 NUP210Q8TEM1 1887 aaPredicted RBP7.54□□□□□ -1.2
BDNF-213ENST00000525950 C17orf113A0A1B0GUU1 675 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 SYT5O00445 386 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 CHP2O43745 196 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 PLOD3O60568 738 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 DHFRP00374 187 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 SOD2P04179 222 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 TPOP07202 933 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 CYP4F8P98187 520 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 PIN1Q13526 163 aaPredicted RBP7.54□□□□□ -1.2
BDNF-213ENST00000525950 CD276Q5ZPR3 534 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 TMEM220Q6QAJ8 160 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 MARCH9Q86YJ5 346 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 OR2A12Q8NGT7 310 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 NEIL3Q8TAT5 605 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 HGDQ93099 445 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 GPA33Q99795 319 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 PELI2Q9HAT8 420 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 PRKAG2Q9UGJ0 569 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 SLC23A1Q9UHI7 598 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 TEKT2Q9UIF3 430 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 CLCA2Q9UQC9 943 aa7.54□□□□□ -1.2
BDNF-213ENST00000525950 CASP8AP2Q9UKL3 1982 aa7.53□□□□□ -1.2
BDNF-213ENST00000525950 SAP18O00422 153 aaKnown RBP7.53□□□□□ -1.2
BDNF-213ENST00000525950 LILRB5O75023 590 aa7.53□□□□□ -1.2
BDNF-213ENST00000525950 TIMP2P16035 220 aa7.53□□□□□ -1.2
BDNF-213ENST00000525950 POLR2CP19387 275 aaPredicted RBP7.53□□□□□ -1.2
BDNF-213ENST00000525950 RBMS1P29558 406 aaKnown RBP7.53□□□□□ -1.2
BDNF-213ENST00000525950 PDHA2P29803 388 aa7.53□□□□□ -1.2
BDNF-213ENST00000525950 PPP2R1BP30154 601 aa7.53□□□□□ -1.2
BDNF-213ENST00000525950 EVI2BP34910 448 aa7.53□□□□□ -1.2
BDNF-213ENST00000525950 BSGP35613 385 aa7.53□□□□□ -1.2
BDNF-213ENST00000525950 ETV3P41162 512 aa7.53□□□□□ -1.2
BDNF-213ENST00000525950 FLT3LGP49771 235 aa7.53□□□□□ -1.2
BDNF-213ENST00000525950 VASPP50552 380 aaPredicted RBP7.53□□□□□ -1.2
BDNF-213ENST00000525950 ANXA11P50995 505 aaKnown RBP7.53□□□□□ -1.2
BDNF-213ENST00000525950 AGFG1P52594 562 aaKnown RBP7.53□□□□□ -1.2
BDNF-213ENST00000525950 GPR176Q14439 515 aa7.53□□□□□ -1.2
BDNF-213ENST00000525950 EOGTQ5NDL2 527 aa7.53□□□□□ -1.2
BDNF-213ENST00000525950 IER5LQ5T953 404 aa7.53□□□□□ -1.2
BDNF-213ENST00000525950 TXNDC8Q6A555 127 aa7.53□□□□□ -1.2
BDNF-213ENST00000525950 TEX261Q6UWH6 196 aa7.53□□□□□ -1.2
BDNF-213ENST00000525950 IQCHQ86VS3 1027 aa7.53□□□□□ -1.2
BDNF-213ENST00000525950 ADGRF3Q8IZF5 1079 aa7.53□□□□□ -1.2
BDNF-213ENST00000525950 UBE2J2Q8N2K1 259 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms