RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 HS3ST1O14792 307 aa10.5□□□□□ -0.73
SDCBP-211ENST00000523441 PGRMC2O15173 223 aa10.5□□□□□ -0.73
SDCBP-211ENST00000523441 TLX2O43763 284 aaPredicted RBP10.5□□□□□ -0.73
SDCBP-211ENST00000523441 TMPRSS11DO60235 418 aa10.5□□□□□ -0.73
SDCBP-211ENST00000523441 NDUFS7O75251 213 aa10.5□□□□□ -0.73
SDCBP-211ENST00000523441 CBR3O75828 277 aa10.5□□□□□ -0.73
SDCBP-211ENST00000523441 TTC4O95801 387 aa10.5□□□□□ -0.73
SDCBP-211ENST00000523441 AIFM1O95831 613 aa10.5□□□□□ -0.73
SDCBP-211ENST00000523441 EPORP19235 508 aa10.5□□□□□ -0.73
SDCBP-211ENST00000523441 TBXA2RP21731 343 aa10.5□□□□□ -0.73
SDCBP-211ENST00000523441 GPX3P22352 226 aa10.5□□□□□ -0.73
SDCBP-211ENST00000523441 CHMP24386 653 aa10.5□□□□□ -0.73
SDCBP-211ENST00000523441 PIK3R1P27986 724 aa10.5□□□□□ -0.73
SDCBP-211ENST00000523441 IDUAP35475 653 aa10.5□□□□□ -0.73
SDCBP-211ENST00000523441 GMPRP36959 345 aa10.5□□□□□ -0.73
SDCBP-211ENST00000523441 PTGDSP41222 190 aa10.5□□□□□ -0.73
SDCBP-211ENST00000523441 ELK3P41970 407 aa10.5□□□□□ -0.73
SDCBP-211ENST00000523441 KIR2DL2P43627 348 aaPredicted RBP10.5□□□□□ -0.73
SDCBP-211ENST00000523441 SLC12A2P55011 1212 aa10.5□□□□□ -0.73
SDCBP-211ENST00000523441 GFRA1P56159 465 aa10.5□□□□□ -0.73
SDCBP-211ENST00000523441 RPS4XP62701 263 aaKnown RBP10.5□□□□□ -0.73
SDCBP-211ENST00000523441 PPP1R7Q15435 360 aa10.5□□□□□ -0.73
SDCBP-211ENST00000523441 OR4D1Q15615 310 aa10.5□□□□□ -0.73
SDCBP-211ENST00000523441 BEX5Q5H9J7 111 aa10.5□□□□□ -0.73
SDCBP-211ENST00000523441 OR2A2Q6IF42 318 aa10.5□□□□□ -0.73
SDCBP-211ENST00000523441 SLC30A6Q6NXT4 461 aa10.5□□□□□ -0.73
SDCBP-211ENST00000523441 AAGABQ6PD74 315 aa10.5□□□□□ -0.73
SDCBP-211ENST00000523441 SCIMPQ6UWF3 145 aa10.5□□□□□ -0.73
SDCBP-211ENST00000523441 OR7G3Q8NG95 312 aa10.5□□□□□ -0.73
SDCBP-211ENST00000523441 OR5M1Q8NGP8 315 aa10.5□□□□□ -0.73
SDCBP-211ENST00000523441 ADIPOR1Q96A54 375 aa10.5□□□□□ -0.73
SDCBP-211ENST00000523441 CTHRC1Q96CG8 243 aa10.5□□□□□ -0.73
SDCBP-211ENST00000523441 TRMT61AQ96FX7 289 aaKnown RBP10.5□□□□□ -0.73
SDCBP-211ENST00000523441 PINK1Q9BXM7 581 aa10.5□□□□□ -0.73
SDCBP-211ENST00000523441 ITPAQ9BY32 194 aa10.5□□□□□ -0.73
SDCBP-211ENST00000523441 OR2B2Q9GZK3 357 aa10.5□□□□□ -0.73
SDCBP-211ENST00000523441 WDR41Q9HAD4 459 aa10.5□□□□□ -0.73
SDCBP-211ENST00000523441 CXorf21Q9HAI6 301 aa10.5□□□□□ -0.73
SDCBP-211ENST00000523441 ELOVL5Q9NYP7 299 aa10.5□□□□□ -0.73
SDCBP-211ENST00000523441 CORO1CQ9ULV4 474 aaPredicted RBP10.5□□□□□ -0.73
SDCBP-211ENST00000523441 CLEC4AQ9UMR7 237 aa10.5□□□□□ -0.73
SDCBP-211ENST00000523441 PRR14LQ5THK1 2151 aa10.49□□□□□ -0.73
SDCBP-211ENST00000523441 PHGDHO43175 533 aaKnown RBP10.49□□□□□ -0.73
SDCBP-211ENST00000523441 KLF4O43474 513 aa10.49□□□□□ -0.73
SDCBP-211ENST00000523441 WIPF1O43516 503 aa10.49□□□□□ -0.73
SDCBP-211ENST00000523441 UGT2B11O75310 529 aa10.49□□□□□ -0.73
SDCBP-211ENST00000523441 NME6O75414 186 aaPredicted RBP10.49□□□□□ -0.73
SDCBP-211ENST00000523441 SOX30O94993 753 aa10.49□□□□□ -0.73
SDCBP-211ENST00000523441 FAM58BPP0C7Q3 252 aa10.49□□□□□ -0.73
SDCBP-211ENST00000523441 SLC35E2BP0CK96 405 aa10.49□□□□□ -0.73
SDCBP-211ENST00000523441 SLC35E2P0CK97 266 aa10.49□□□□□ -0.73
SDCBP-211ENST00000523441 ZNF708P17019 499 aa10.49□□□□□ -0.73
SDCBP-211ENST00000523441 EEF1A1P68104 462 aaKnown RBP10.49□□□□□ -0.73
SDCBP-211ENST00000523441 BIKQ13323 160 aa10.49□□□□□ -0.73
SDCBP-211ENST00000523441 DEPDC1Q5TB30 811 aa10.49□□□□□ -0.73
SDCBP-211ENST00000523441 RNASEH2BQ5TBB1 312 aaKnown RBP10.49□□□□□ -0.73
SDCBP-211ENST00000523441 EEF1A1P5Q5VTE0 462 aa10.49□□□□□ -0.73
SDCBP-211ENST00000523441 SULT1C3Q6IMI6 304 aa10.49□□□□□ -0.73
SDCBP-211ENST00000523441 FAM111BQ6SJ93 734 aa10.49□□□□□ -0.73
SDCBP-211ENST00000523441 IL17RELQ6ZVW7 336 aa10.49□□□□□ -0.73
SDCBP-211ENST00000523441 NUP54Q7Z3B4 507 aa10.49□□□□□ -0.73
SDCBP-211ENST00000523441 TCAIMQ8N3R3 496 aa10.49□□□□□ -0.73
SDCBP-211ENST00000523441 ZNF615Q8N8J6 731 aa10.49□□□□□ -0.73
SDCBP-211ENST00000523441 HUS1BQ8NHY5 278 aa10.49□□□□□ -0.73
SDCBP-211ENST00000523441 RAB3IL1Q8TBN0 382 aa10.49□□□□□ -0.73
SDCBP-211ENST00000523441 IGFBPL1Q8WX77 278 aa10.49□□□□□ -0.73
SDCBP-211ENST00000523441 NEUROG1Q92886 237 aa10.49□□□□□ -0.73
SDCBP-211ENST00000523441 HGDQ93099 445 aa10.49□□□□□ -0.73
SDCBP-211ENST00000523441 KCNK17Q96T54 332 aa10.49□□□□□ -0.73
SDCBP-211ENST00000523441 NAP1L3Q99457 506 aaPredicted RBP10.49□□□□□ -0.73
SDCBP-211ENST00000523441 CENPKQ9BS16 269 aa10.49□□□□□ -0.73
SDCBP-211ENST00000523441 NTMT1Q9BV86 223 aa10.49□□□□□ -0.73
SDCBP-211ENST00000523441 BEX2Q9BXY8 128 aa10.49□□□□□ -0.73
SDCBP-211ENST00000523441 AMBRA1Q9C0C7 1298 aa10.49□□□□□ -0.73
SDCBP-211ENST00000523441 SLCO5A1Q9H2Y9 848 aa10.49□□□□□ -0.73
SDCBP-211ENST00000523441 PLAC1Q9HBJ0 212 aa10.49□□□□□ -0.73
SDCBP-211ENST00000523441 PSD3Q9NYI0 1048 aa10.49□□□□□ -0.73
SDCBP-211ENST00000523441 FETUBQ9UGM5 382 aa10.49□□□□□ -0.73
SDCBP-211ENST00000523441 ASIC3Q9UHC3 531 aa10.49□□□□□ -0.73
SDCBP-211ENST00000523441 GDF2Q9UK05 429 aaPredicted RBP10.49□□□□□ -0.73
SDCBP-211ENST00000523441 RNF112Q9ULX5 631 aa10.49□□□□□ -0.73
SDCBP-211ENST00000523441 EXO1Q9UQ84 846 aaKnown RBP10.49□□□□□ -0.73
SDCBP-211ENST00000523441 LIPT1Q9Y234 373 aa10.49□□□□□ -0.73
SDCBP-211ENST00000523441 DLGAP4Q9Y2H0 992 aa10.49□□□□□ -0.73
SDCBP-211ENST00000523441 EFCAB8A8MWE9 144 aa10.48□□□□□ -0.73
SDCBP-211ENST00000523441 H3BML4 177 aa10.48□□□□□ -0.73
SDCBP-211ENST00000523441 GMFGO60234 142 aa10.48□□□□□ -0.73
SDCBP-211ENST00000523441 REM1O75628 298 aa10.48□□□□□ -0.73
SDCBP-211ENST00000523441 SCELO95171 688 aa10.48□□□□□ -0.73
SDCBP-211ENST00000523441 FAM157CP0CG43 387 aa10.48□□□□□ -0.73
SDCBP-211ENST00000523441 CCDC166P0CW27 439 aa10.48□□□□□ -0.73
SDCBP-211ENST00000523441 PTNP21246 168 aa10.48□□□□□ -0.73
SDCBP-211ENST00000523441 FUT7Q11130 342 aa10.48□□□□□ -0.73
SDCBP-211ENST00000523441 CYP1B1Q16678 543 aa10.48□□□□□ -0.73
SDCBP-211ENST00000523441 RAET1LQ5VY80 246 aa10.48□□□□□ -0.73
SDCBP-211ENST00000523441 FAM180BQ6P0A1 224 aa10.48□□□□□ -0.73
SDCBP-211ENST00000523441 SH2D5Q6ZV89 423 aa10.48□□□□□ -0.73
SDCBP-211ENST00000523441 ZC3HC1Q86WB0 502 aaKnown RBP10.48□□□□□ -0.73
SDCBP-211ENST00000523441 PLCZ1Q86YW0 608 aa10.48□□□□□ -0.73
SDCBP-211ENST00000523441 ZNF619Q8N2I2 560 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms