RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 RNASEH2BQ5TBB1 312 aaKnown RBP6.05□□□□□ -1.44
SDCBP-210ENST00000522843 KCTD11Q693B1 232 aa6.05□□□□□ -1.44
SDCBP-210ENST00000522843 KIAA0930Q6ICG6 404 aaPredicted RBP6.05□□□□□ -1.44
SDCBP-210ENST00000522843 DARS2Q6PI48 645 aaKnown RBP6.05□□□□□ -1.44
SDCBP-210ENST00000522843 IL20RBQ6UXL0 311 aa6.05□□□□□ -1.44
SDCBP-210ENST00000522843 LRIG3Q6UXM1 1119 aa6.05□□□□□ -1.44
SDCBP-210ENST00000522843 TRMT10CQ7L0Y3 403 aaKnown RBP6.05□□□□□ -1.44
SDCBP-210ENST00000522843 ABHD13Q7L211 337 aa6.05□□□□□ -1.44
SDCBP-210ENST00000522843 LDB1Q86U70 411 aaPredicted RBP6.05□□□□□ -1.44
SDCBP-210ENST00000522843 NAT8LQ8N9F0 302 aa6.05□□□□□ -1.44
SDCBP-210ENST00000522843 FAM71DQ8N9W8 422 aa6.05□□□□□ -1.44
SDCBP-210ENST00000522843 FBXO25Q8TCJ0 367 aa6.05□□□□□ -1.44
SDCBP-210ENST00000522843 STYXQ8WUJ0 223 aa6.05□□□□□ -1.44
SDCBP-210ENST00000522843 SMPDL3AQ92484 453 aa6.05□□□□□ -1.44
SDCBP-210ENST00000522843 TM4SF19Q96DZ7 209 aa6.05□□□□□ -1.44
SDCBP-210ENST00000522843 MARK4Q96L34 752 aa6.05□□□□□ -1.44
SDCBP-210ENST00000522843 OR1F2PQ96R84 312 aa6.05□□□□□ -1.44
SDCBP-210ENST00000522843 FMO2Q99518 471 aa6.05□□□□□ -1.44
SDCBP-210ENST00000522843 FERMT1Q9BQL6 677 aa6.05□□□□□ -1.44
SDCBP-210ENST00000522843 POFUT1Q9H488 388 aa6.05□□□□□ -1.44
SDCBP-210ENST00000522843 UBTD1Q9HAC8 227 aa6.05□□□□□ -1.44
SDCBP-210ENST00000522843 ZNF701Q9NV72 531 aaPredicted RBP6.05□□□□□ -1.44
SDCBP-210ENST00000522843 SLC2A6Q9UGQ3 507 aa6.05□□□□□ -1.44
SDCBP-210ENST00000522843 ANAPC5Q9UJX4 755 aa6.05□□□□□ -1.44
SDCBP-210ENST00000522843 CLDN16Q9Y5I7 305 aa6.05□□□□□ -1.44
SDCBP-210ENST00000522843 MED12Q93074 2177 aa6.05□□□□□ -1.44
SDCBP-210ENST00000522843 KCNE1BA0A087WTH5 132 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 UBE2QL1A1L167 161 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 LRRC3CA6NJW4 275 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 ERI2A8K979 691 aaKnown RBP6.04□□□□□ -1.44
SDCBP-210ENST00000522843 A8MVJ9 347 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 EEF1E1-BLOC1S5C9J1V9 151 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 H7C0C1 242 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 EEF1E1O43324 174 aaKnown RBP6.04□□□□□ -1.44
SDCBP-210ENST00000522843 CHST10O43529 356 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 TLX2O43763 284 aaPredicted RBP6.04□□□□□ -1.44
SDCBP-210ENST00000522843 LCMT2O60294 686 aaKnown RBP6.04□□□□□ -1.44
SDCBP-210ENST00000522843 B4GALT2O60909 372 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 OR2J2O76002 312 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 APOL3O95236 402 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 MATN4O95460 622 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 NUDT3O95989 172 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 GOT2P00505 430 aaKnown RBP6.04□□□□□ -1.44
SDCBP-210ENST00000522843 APOA4P06727 396 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 NUDT17P0C025 328 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 CCL3P10147 92 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 MLNP12872 115 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 TPSB2P20231 275 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 FPR1P21462 350 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 PPP2R1BP30154 601 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 RPA3P35244 121 aaPredicted RBP6.04□□□□□ -1.44
SDCBP-210ENST00000522843 FDFT1P37268 417 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 MAGEA3P43357 314 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 ATP5OP48047 213 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 SSR4P51571 173 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 CLCN2P51788 898 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 NEK2P51955 445 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 ADARP55265 1226 aaKnown RBP6.04□□□□□ -1.44
SDCBP-210ENST00000522843 EIF3BP55884 814 aaKnown RBP6.04□□□□□ -1.44
SDCBP-210ENST00000522843 FOXF2Q12947 444 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 GBX1Q14549 363 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 SLC10A1Q14973 349 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 RASA2Q15283 850 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 TPSAB1Q15661 275 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 ANKRD20A2Q5SQ80 823 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 ANKRD20A1Q5TYW2 823 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 ANKRD20A3Q5VUR7 823 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 GSTA5Q7RTV2 222 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 CROCCP2Q86T23 111 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 CNPY4Q8N129 248 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 FBXW8Q8N3Y1 598 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 B3GNT7Q8NFL0 401 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 OR9A1PQ8NGU1 263 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 ROBO4Q8WZ75 1007 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 TBC1D20Q96BZ9 403 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 LRRC46Q96FV0 321 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 PRAP1Q96NZ9 151 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 PPP1R2P1Q96PQ5 205 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 RASL10BQ96S79 203 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 PKP4Q99569 1192 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 FAM173AQ9BQD7 235 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 ROPN1BQ9BZX4 212 aaPredicted RBP6.04□□□□□ -1.44
SDCBP-210ENST00000522843 P2RY12Q9H244 342 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 LDAHQ9H6V9 325 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 ZMAT4Q9H898 229 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 ROPN1Q9HAT0 212 aaPredicted RBP6.04□□□□□ -1.44
SDCBP-210ENST00000522843 PROK2Q9HC23 129 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 ANKHQ9HCJ1 492 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 EIF2B3Q9NR50 452 aaKnown RBP6.04□□□□□ -1.44
SDCBP-210ENST00000522843 HPF1Q9NWY4 346 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 MARCH4Q9P2E8 410 aaPredicted RBP6.04□□□□□ -1.44
SDCBP-210ENST00000522843 ASIC3Q9UHC3 531 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 FBXW2Q9UKT8 454 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 PPIEQ9UNP9 301 aaKnown RBP6.04□□□□□ -1.44
SDCBP-210ENST00000522843 ERVK-11Q9UQG0 969 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 SH2B3Q9UQQ2 575 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 YARS2Q9Y2Z4 477 aaKnown RBP6.04□□□□□ -1.44
SDCBP-210ENST00000522843 ATG4BQ9Y4P1 393 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 PCDHGB3Q9Y5G1 929 aa6.04□□□□□ -1.44
SDCBP-210ENST00000522843 A0A0A6YYJ9 748 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms