RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 CHN1P15882 459 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 GPX3P22352 226 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 ABCD3P28288 659 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 MSX1P28360 303 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 HMOX2P30519 316 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 CASP3P42574 277 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 KRT6CP48668 564 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 RPP38P78345 283 aaKnown RBP9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 TFF3Q07654 80 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 ZNF844Q08AG5 666 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 IFFO1Q0D2I5 559 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 GALNT1Q10472 559 aaPredicted RBP9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 LTB4RQ15722 352 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 TRMT12Q53H54 448 aaKnown RBP9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 EIPR1Q53HC9 387 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 UNC50Q53HI1 259 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 SPDYAQ5MJ70 313 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 WIPI1Q5MNZ9 446 aaPredicted RBP9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 TBCELQ5QJ74 424 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 C10orf62Q5T681 223 aaPredicted RBP9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 CES4AQ5XG92 561 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 SLC48A1Q6P1K1 146 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 ANGPTL8Q6UXH0 198 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 GPRIN3Q6ZVF9 776 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 YRDCQ86U90 279 aaKnown RBP9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 ULK2Q8IYT8 1036 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 CCDC116Q8IYX3 515 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 VWA5B2Q8N398 1253 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 TMEM151AQ8N4L1 468 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 CCNYL1Q8N7R7 359 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 ZNF441Q8N8Z8 693 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 OR52R1Q8NGF1 315 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 CDC26Q8NHZ8 85 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 RDH11Q8TC12 318 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 KAT2AQ92830 837 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 EXOSC8Q96B26 276 aaKnown RBP9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 TIMP4Q99727 224 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 FAIM2Q9BWQ8 316 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 ANGPTL4Q9BY76 406 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 VIPAS39Q9H9C1 493 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 ANKRA2Q9H9E1 313 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 ACKR4Q9NPB9 350 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 FETUBQ9UGM5 382 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 TBK1Q9UHD2 729 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 UTS2RQ9UKP6 389 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 CES1P1Q9UKY3 287 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 DTX4Q9Y2E6 619 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 F8P00451 2351 aa9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 ANKRD33BA6NCL7 494 aa9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 KDM4EB2RXH2 506 aaPredicted RBP9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 FAM47E-STBD1D6RA91 191 aa9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 ULK1O75385 1050 aa9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 ABCB1P08183 1280 aaPredicted RBP9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 IL3P08700 152 aa9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 PCSK2P16519 638 aa9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 IMPDH1P20839 514 aa9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 S1PR1P21453 382 aa9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 BMP5P22003 454 aa9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 TCEA1P23193 301 aaKnown RBP9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 GCAP28676 217 aa9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 TMED10P49755 219 aaKnown RBP9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 AGFG1P52594 562 aaKnown RBP9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 DLX5P56178 289 aa9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 MRPS35P82673 323 aaKnown RBP9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 HMGCS1Q01581 520 aa9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 DUSP2Q05923 314 aa9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 PLCXD2Q0VAA5 305 aa9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 MGAT2Q10469 447 aa9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 MAP4K2Q12851 820 aa9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 RASA2Q15283 850 aa9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 PRICKLE4Q2TBC4 344 aa9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 GGTA1PQ4G0N0 100 aa9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 ZNF678Q5SXM1 525 aa9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 ARSKQ6UWY0 536 aa9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 ZZZ3Q8IYH5 903 aa9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 TNIP2Q8NFZ5 429 aa9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 OR1J4Q8NGS1 313 aa9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 EPS8L3Q8TE67 593 aaKnown RBP9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 NRGNQ92686 78 aa9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 MTBPQ96DY7 904 aa9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 OMA1Q96E52 524 aa9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 LCORQ96JN0 433 aaPredicted RBP9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 TMEM237Q96Q45 408 aa9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 KCNA7Q96RP8 456 aa9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 TRIB1Q96RU8 372 aa9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 NODALQ96S42 347 aa9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 TMEM109Q9BVC6 243 aa9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 ITPAQ9BY32 194 aa9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 ROPN1BQ9BZX4 212 aaPredicted RBP9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 PPCSQ9HAB8 311 aa9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 ROPN1Q9HAT0 212 aaPredicted RBP9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 BRF2Q9HAW0 419 aa9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 MAT2BQ9NZL9 334 aa9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 KLRF1Q9NZS2 232 aa9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 HEY2Q9UBP5 337 aa9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 TRPS1Q9UHF7 1281 aa9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 ZNF225Q9UK10 706 aa9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 MAPRE3Q9UPY8 281 aa9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 CFL2Q9Y281 166 aa9.37□□□□□ -0.91
CTNNA1-235ENST00000522730 DLGAP4Q9Y2H0 992 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms