RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 PTPN13Q12923 2485 aa16.42■□□□□ 0.22
CLK4-211ENST00000522556 LRRC3CA6NJW4 275 aa16.42■□□□□ 0.22
CLK4-211ENST00000522556 TFECO14948 347 aaPredicted RBP16.42■□□□□ 0.22
CLK4-211ENST00000522556 LRRTM2O43300 516 aa16.42■□□□□ 0.22
CLK4-211ENST00000522556 ASNA1O43681 348 aa16.42■□□□□ 0.22
CLK4-211ENST00000522556 LDLRP01130 860 aa16.42■□□□□ 0.22
CLK4-211ENST00000522556 STSP08842 583 aa16.42■□□□□ 0.22
CLK4-211ENST00000522556 H2AFXP16104 143 aaPredicted RBP16.42■□□□□ 0.22
CLK4-211ENST00000522556 CNR1P21554 472 aa16.42■□□□□ 0.22
CLK4-211ENST00000522556 ABCD3P28288 659 aa16.42■□□□□ 0.22
CLK4-211ENST00000522556 STX3Q13277 289 aa16.42■□□□□ 0.22
CLK4-211ENST00000522556 PDE7AQ13946 482 aa16.42■□□□□ 0.22
CLK4-211ENST00000522556 NCCRP1Q6ZVX7 275 aaPredicted RBP16.42■□□□□ 0.22
CLK4-211ENST00000522556 FJX1Q86VR8 437 aa16.42■□□□□ 0.22
CLK4-211ENST00000522556 OR7A2PQ8NGA2 310 aa16.42■□□□□ 0.22
CLK4-211ENST00000522556 TP53INP1Q96A56 240 aa16.42■□□□□ 0.22
CLK4-211ENST00000522556 TUBGCP3Q96CW5 907 aa16.42■□□□□ 0.22
CLK4-211ENST00000522556 MAGED4Q96JG8 741 aa16.42■□□□□ 0.22
CLK4-211ENST00000522556 SGCZQ96LD1 299 aa16.42■□□□□ 0.22
CLK4-211ENST00000522556 PPP3R2Q96LZ3 170 aa16.42■□□□□ 0.22
CLK4-211ENST00000522556 VSTM2LQ96N03 204 aa16.42■□□□□ 0.22
CLK4-211ENST00000522556 DEFB127Q9H1M4 99 aa16.42■□□□□ 0.22
CLK4-211ENST00000522556 REEP4Q9H6H4 257 aa16.42■□□□□ 0.22
CLK4-211ENST00000522556 FOLH1BQ9HBA9 442 aa16.42■□□□□ 0.22
CLK4-211ENST00000522556 TINAGQ9UJW2 476 aa16.42■□□□□ 0.22
CLK4-211ENST00000522556 RAP2CQ9Y3L5 183 aa16.42■□□□□ 0.22
CLK4-211ENST00000522556 GTF3C1Q12789 2109 aa16.42■□□□□ 0.22
CLK4-211ENST00000522556 PDPK1O15530 556 aa16.41■□□□□ 0.22
CLK4-211ENST00000522556 CDC40O60508 579 aaKnown RBP eCLIP16.41■□□□□ 0.22
CLK4-211ENST00000522556 PDE9AO76083 593 aa16.41■□□□□ 0.22
CLK4-211ENST00000522556 GLSO94925 669 aaPredicted RBP16.41■□□□□ 0.22
CLK4-211ENST00000522556 P04436 131 aa16.41■□□□□ 0.22
CLK4-211ENST00000522556 RFPL3SP0C7P2 107 aa16.41■□□□□ 0.22
CLK4-211ENST00000522556 CT45A8P0DMV1 189 aa16.41■□□□□ 0.22
CLK4-211ENST00000522556 CT45A9P0DMV2 189 aa16.41■□□□□ 0.22
CLK4-211ENST00000522556 NTSP30990 170 aa16.41■□□□□ 0.22
CLK4-211ENST00000522556 MAGEA5P43359 124 aa16.41■□□□□ 0.22
CLK4-211ENST00000522556 CDK9P50750 372 aaKnown RBP16.41■□□□□ 0.22
CLK4-211ENST00000522556 PLGLB1Q02325 96 aa16.41■□□□□ 0.22
CLK4-211ENST00000522556 HSPB3Q12988 150 aa16.41■□□□□ 0.22
CLK4-211ENST00000522556 RPS6KA2Q15349 733 aa16.41■□□□□ 0.22
CLK4-211ENST00000522556 C3AR1Q16581 482 aa16.41■□□□□ 0.22
CLK4-211ENST00000522556 ATP6AP1LQ52LC2 224 aa16.41■□□□□ 0.22
CLK4-211ENST00000522556 C4orf17Q53FE4 359 aa16.41■□□□□ 0.22
CLK4-211ENST00000522556 CT45A2Q5DJT8 189 aa16.41■□□□□ 0.22
CLK4-211ENST00000522556 IL23RQ5VWK5 629 aa16.41■□□□□ 0.22
CLK4-211ENST00000522556 SLC22A10Q63ZE4 541 aa16.41■□□□□ 0.22
CLK4-211ENST00000522556 HIST2H2BCQ6DN03 193 aa16.41■□□□□ 0.22
CLK4-211ENST00000522556 TAGAPQ8N103 731 aa16.41■□□□□ 0.22
CLK4-211ENST00000522556 FBXW8Q8N3Y1 598 aa16.41■□□□□ 0.22
CLK4-211ENST00000522556 TMEM251Q8N6I4 163 aa16.41■□□□□ 0.22
CLK4-211ENST00000522556 KRTCAP2Q8N6L1 136 aa16.41■□□□□ 0.22
CLK4-211ENST00000522556 FNDC5Q8NAU1 212 aa16.41■□□□□ 0.22
CLK4-211ENST00000522556 POGLUT1Q8NBL1 392 aa16.41■□□□□ 0.22
CLK4-211ENST00000522556 C17orf47Q8NEP4 570 aa16.41■□□□□ 0.22
CLK4-211ENST00000522556 OR4N2Q8NGD1 307 aa16.41■□□□□ 0.22
CLK4-211ENST00000522556 SSC4DQ8WTU2 575 aa16.41■□□□□ 0.22
CLK4-211ENST00000522556 PPCDCQ96CD2 204 aa16.41■□□□□ 0.22
CLK4-211ENST00000522556 OMA1Q96E52 524 aa16.41■□□□□ 0.22
CLK4-211ENST00000522556 LCORQ96JN0 433 aaPredicted RBP16.41■□□□□ 0.22
CLK4-211ENST00000522556 FAM173AQ9BQD7 235 aa16.41■□□□□ 0.22
CLK4-211ENST00000522556 STMN4Q9H169 189 aaPredicted RBP16.41■□□□□ 0.22
CLK4-211ENST00000522556 ASH1LQ9NR48 2969 aaKnown RBP16.41■□□□□ 0.22
CLK4-211ENST00000522556 HAO1Q9UJM8 370 aa16.41■□□□□ 0.22
CLK4-211ENST00000522556 SLC5A6Q9Y289 635 aa16.41■□□□□ 0.22
CLK4-211ENST00000522556 TMED5Q9Y3A6 229 aa16.41■□□□□ 0.22
CLK4-211ENST00000522556 DIDO1Q9BTC0 2240 aaKnown RBP16.41■□□□□ 0.22
CLK4-211ENST00000522556 TRGV8A0A0C4DH27 118 aa16.4■□□□□ 0.22
CLK4-211ENST00000522556 A1L4Q6 167 aa16.4■□□□□ 0.22
CLK4-211ENST00000522556 UPK1AO00322 258 aa16.4■□□□□ 0.22
CLK4-211ENST00000522556 SCAMP2O15127 329 aaKnown RBP16.4■□□□□ 0.22
CLK4-211ENST00000522556 PLOD3O60568 738 aa16.4■□□□□ 0.22
CLK4-211ENST00000522556 SLC19A2O60779 497 aa16.4■□□□□ 0.22
CLK4-211ENST00000522556 GRK2P25098 689 aa16.4■□□□□ 0.22
CLK4-211ENST00000522556 MPIP34949 423 aa16.4■□□□□ 0.22
CLK4-211ENST00000522556 PPIAP62937 165 aaKnown RBP16.4■□□□□ 0.22
CLK4-211ENST00000522556 AGBL2Q5U5Z8 902 aa16.4■□□□□ 0.22
CLK4-211ENST00000522556 SAMD14Q8IZD0 417 aaPredicted RBP16.4■□□□□ 0.22
CLK4-211ENST00000522556 SPPL2AQ8TCT8 520 aa16.4■□□□□ 0.22
CLK4-211ENST00000522556 HGDQ93099 445 aa16.4■□□□□ 0.22
CLK4-211ENST00000522556 PSMG3-AS1Q96PY0 264 aa16.4■□□□□ 0.22
CLK4-211ENST00000522556 BTBD9Q96Q07 612 aa16.4■□□□□ 0.22
CLK4-211ENST00000522556 NODALQ96S42 347 aa16.4■□□□□ 0.22
CLK4-211ENST00000522556 NUF2Q9BZD4 464 aa16.4■□□□□ 0.22
CLK4-211ENST00000522556 SH3BP4Q9P0V3 963 aa16.4■□□□□ 0.22
CLK4-211ENST00000522556 TNFRSF10DQ9UBN6 386 aa16.4■□□□□ 0.22
CLK4-211ENST00000522556 MARCOQ9UEW3 520 aaPredicted RBP16.4■□□□□ 0.22
CLK4-211ENST00000522556 GPR55Q9Y2T6 319 aaPredicted RBP16.4■□□□□ 0.22
CLK4-211ENST00000522556 FREM3P0C091 2139 aa16.4■□□□□ 0.22
CLK4-211ENST00000522556 HECTD1Q9ULT8 2610 aa16.4■□□□□ 0.22
CLK4-211ENST00000522556 ICE1Q9Y2F5 2266 aa16.39■□□□□ 0.21
CLK4-211ENST00000522556 MYO7BQ6PIF6 2116 aa16.39■□□□□ 0.21
CLK4-211ENST00000522556 A0A1B0GTH9 108 aa16.39■□□□□ 0.21
CLK4-211ENST00000522556 FRG2CA6NGY1 282 aa16.39■□□□□ 0.21
CLK4-211ENST00000522556 CYSRT1A8MQ03 144 aa16.39■□□□□ 0.21
CLK4-211ENST00000522556 UGT2B11O75310 529 aa16.39■□□□□ 0.21
CLK4-211ENST00000522556 ERN1O75460 977 aaKnown RBP16.39■□□□□ 0.21
CLK4-211ENST00000522556 PPM1BO75688 479 aa16.39■□□□□ 0.21
CLK4-211ENST00000522556 PSMG1O95456 288 aa16.39■□□□□ 0.21
CLK4-211ENST00000522556 ABCB1P08183 1280 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms