RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 PORP16435 677 aaPredicted RBP9.58□□□□□ -0.88
MCF2-209ENST00000520602 GSTM3P21266 225 aa9.58□□□□□ -0.88
MCF2-209ENST00000520602 CXCR4P61073 352 aa9.58□□□□□ -0.88
MCF2-209ENST00000520602 HHEXQ03014 270 aa9.58□□□□□ -0.88
MCF2-209ENST00000520602 HYAL1Q12794 435 aa9.58□□□□□ -0.88
MCF2-209ENST00000520602 FBXO43Q4G163 708 aa9.58□□□□□ -0.88
MCF2-209ENST00000520602 LIPKQ5VXJ0 399 aa9.58□□□□□ -0.88
MCF2-209ENST00000520602 MS4A6EQ96DS6 147 aa9.58□□□□□ -0.88
MCF2-209ENST00000520602 TOE1Q96GM8 510 aaKnown RBP9.58□□□□□ -0.88
MCF2-209ENST00000520602 TMEM80Q96HE8 168 aa9.58□□□□□ -0.88
MCF2-209ENST00000520602 ZFYVE21Q9BQ24 234 aa9.58□□□□□ -0.88
MCF2-209ENST00000520602 OR51E2Q9H255 320 aa9.58□□□□□ -0.88
MCF2-209ENST00000520602 APOBEC3BQ9UH17 382 aaKnown RBP9.58□□□□□ -0.88
MCF2-209ENST00000520602 LIPT1Q9Y234 373 aa9.58□□□□□ -0.88
MCF2-209ENST00000520602 PCDHGA6Q9Y5G7 932 aa9.58□□□□□ -0.88
MCF2-209ENST00000520602 FAM86C2PA6NEL3 165 aa9.58□□□□□ -0.88
MCF2-209ENST00000520602 RHPN2P1A8MT19 583 aa9.58□□□□□ -0.88
MCF2-209ENST00000520602 HNRNPCL2B2RXH8 293 aa9.58□□□□□ -0.88
MCF2-209ENST00000520602 KRT8P05787 483 aa9.58□□□□□ -0.88
MCF2-209ENST00000520602 MAOBP27338 520 aa9.58□□□□□ -0.88
MCF2-209ENST00000520602 AHRP35869 848 aa9.58□□□□□ -0.88
MCF2-209ENST00000520602 PCYT1AP49585 367 aa9.58□□□□□ -0.88
MCF2-209ENST00000520602 ZNF267Q14586 743 aaPredicted RBP9.58□□□□□ -0.88
MCF2-209ENST00000520602 NDUFA9Q16795 377 aa9.58□□□□□ -0.88
MCF2-209ENST00000520602 SLC27A4Q6P1M0 643 aa9.58□□□□□ -0.88
MCF2-209ENST00000520602 VN1R5Q7Z5H4 357 aa9.58□□□□□ -0.88
MCF2-209ENST00000520602 BCDIN3DQ7Z5W3 292 aaKnown RBP9.58□□□□□ -0.88
MCF2-209ENST00000520602 LHFPL3Q86UP9 236 aa9.58□□□□□ -0.88
MCF2-209ENST00000520602 FNDC8Q8TC99 324 aa9.58□□□□□ -0.88
MCF2-209ENST00000520602 OR7D2Q96RA2 312 aa9.58□□□□□ -0.88
MCF2-209ENST00000520602 PITHD1Q9GZP4 211 aaPredicted RBP9.58□□□□□ -0.88
MCF2-209ENST00000520602 ZBTB20Q9HC78 741 aaPredicted RBP9.58□□□□□ -0.88
MCF2-209ENST00000520602 HCN3Q9P1Z3 774 aa9.58□□□□□ -0.88
MCF2-209ENST00000520602 SCML1Q9UN30 329 aa9.58□□□□□ -0.88
MCF2-209ENST00000520602 A0A0G2JPF8 293 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 HNRNPCL3B7ZW38 293 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 HNRNPCL4P0DMR1 293 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 IFI30P13284 250 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 MAGEA2P43356 314 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 TPMTP51580 245 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 CDH11P55287 796 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 SLC35A2P78381 396 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 GPR18Q14330 331 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 TPRG1LQ5T0D9 272 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 ZNF554Q86TJ5 538 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 FAM98AQ8NCA5 519 aaKnown RBP9.57□□□□□ -0.88
MCF2-209ENST00000520602 TBC1D15Q8TC07 691 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 CDS1Q92903 461 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 MOAP1Q96BY2 351 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 C7orf34Q96L11 122 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 GAL3ST4Q96RP7 486 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 ACTRT3Q9BYD9 372 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 SLAMF7Q9NQ25 335 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 CPNE7Q9UBL6 633 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 NDRG4Q9ULP0 352 aaKnown RBP9.57□□□□□ -0.88
MCF2-209ENST00000520602 CA14Q9ULX7 337 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 PLXNA3P51805 1871 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 A8MU76 341 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 HMGN4O00479 90 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 SPINT1O43278 529 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 LILRB5O75023 590 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 PRG2P13727 222 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 ITPKBP27987 946 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 GZMMP51124 257 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 FBXW4P57775 412 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 SPHARQ15513 63 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 TAB1Q15750 504 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 MLF2Q15773 248 aaPredicted RBP9.57□□□□□ -0.88
MCF2-209ENST00000520602 KLHL22Q53GT1 634 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 NRMQ8IXM6 262 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 ADGRF3Q8IZF5 1079 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 DNAJC22Q8N4W6 341 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 OR10H4Q8NGA5 316 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 OR6T1Q8NGN1 323 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 OR51A7Q8NH64 312 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 RFKQ969G6 155 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 GAL3ST3Q96A11 431 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 COX14Q96I36 57 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 ADAM29Q9UKF5 820 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 SGK494L7N484 410 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 CCRL2O00421 344 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 SLC30A4O14863 429 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 TFECO14948 347 aaPredicted RBP9.57□□□□□ -0.88
MCF2-209ENST00000520602 SDC3O75056 442 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 AGR2O95994 175 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 CAPNS1P04632 268 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 FGL2Q14314 439 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 EIPR1Q53HC9 387 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 ANKRD13BQ86YJ7 626 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 GPR135Q8IZ08 494 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 ZFP41Q8N8Y5 198 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 RNFT2Q96EX2 444 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 MRGPRX1Q96LB2 322 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 HHIPQ96QV1 700 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 WASH6PQ9NQA3 447 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 NECTIN3Q9NQS3 549 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 GTF2A1LQ9UNN4 478 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 PCDHGA4Q9Y5G9 962 aa9.57□□□□□ -0.88
MCF2-209ENST00000520602 TRIOBPQ9H2D6 2365 aa9.56□□□□□ -0.88
MCF2-209ENST00000520602 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms