RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 CLIC1O00299 241 aa16.52■□□□□ 0.24
SDC2-205ENST00000520233 EBAG9O00559 213 aa16.52■□□□□ 0.24
SDC2-205ENST00000520233 ZFAND5O76080 213 aa16.52■□□□□ 0.24
SDC2-205ENST00000520233 HMGN2P05204 90 aaKnown RBP16.52■□□□□ 0.24
SDC2-205ENST00000520233 CELA2AP08217 269 aa16.52■□□□□ 0.24
SDC2-205ENST00000520233 PPIBP23284 216 aaKnown RBP16.52■□□□□ 0.24
SDC2-205ENST00000520233 ITPKBP27987 946 aa16.52■□□□□ 0.24
SDC2-205ENST00000520233 TMPRSS3P57727 454 aa16.52■□□□□ 0.24
SDC2-205ENST00000520233 RNF4P78317 190 aa16.52■□□□□ 0.24
SDC2-205ENST00000520233 VAC14Q08AM6 782 aa16.52■□□□□ 0.24
SDC2-205ENST00000520233 EBPQ15125 230 aaKnown RBP16.52■□□□□ 0.24
SDC2-205ENST00000520233 MFSD12Q6NUT3 480 aa16.52■□□□□ 0.24
SDC2-205ENST00000520233 INO80CQ6PI98 192 aaPredicted RBP16.52■□□□□ 0.24
SDC2-205ENST00000520233 KIF2BQ8N4N8 673 aa16.52■□□□□ 0.24
SDC2-205ENST00000520233 OR5L2Q8NGL0 311 aa16.52■□□□□ 0.24
SDC2-205ENST00000520233 AURKBQ96GD4 344 aaPredicted RBP16.52■□□□□ 0.24
SDC2-205ENST00000520233 SLC35G5Q96KT7 338 aa16.52■□□□□ 0.24
SDC2-205ENST00000520233 VSTM2LQ96N03 204 aa16.52■□□□□ 0.24
SDC2-205ENST00000520233 ANKRD27Q96NW4 1050 aa16.52■□□□□ 0.24
SDC2-205ENST00000520233 DEFB126Q9BYW3 111 aa16.52■□□□□ 0.24
SDC2-205ENST00000520233 FOLH1BQ9HBA9 442 aa16.52■□□□□ 0.24
SDC2-205ENST00000520233 EQTNQ9NQ60 294 aa16.52■□□□□ 0.24
SDC2-205ENST00000520233 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.52■□□□□ 0.24
SDC2-205ENST00000520233 C2orf92A0A1B0GVN3 265 aa16.51■□□□□ 0.23
SDC2-205ENST00000520233 TTC36A6NLP5 189 aa16.51■□□□□ 0.23
SDC2-205ENST00000520233 PRKNO60260 465 aaPredicted RBP16.51■□□□□ 0.23
SDC2-205ENST00000520233 KRT16P08779 473 aa16.51■□□□□ 0.23
SDC2-205ENST00000520233 ITGAMP11215 1152 aa16.51■□□□□ 0.23
SDC2-205ENST00000520233 MAGEA8P43361 318 aa16.51■□□□□ 0.23
SDC2-205ENST00000520233 SOX8P57073 446 aa16.51■□□□□ 0.23
SDC2-205ENST00000520233 DCAF7P61962 342 aa16.51■□□□□ 0.23
SDC2-205ENST00000520233 ZNF155Q12901 538 aaPredicted RBP16.51■□□□□ 0.23
SDC2-205ENST00000520233 BNIP1Q12981 228 aa16.51■□□□□ 0.23
SDC2-205ENST00000520233 CHAF1BQ13112 559 aa16.51■□□□□ 0.23
SDC2-205ENST00000520233 CAPRIN1Q14444 709 aaKnown RBP16.51■□□□□ 0.23
SDC2-205ENST00000520233 LASP1Q14847 261 aaKnown RBP16.51■□□□□ 0.23
SDC2-205ENST00000520233 DEFB109BQ30KR1 87 aa16.51■□□□□ 0.23
SDC2-205ENST00000520233 EXOSC6Q5RKV6 272 aaKnown RBP16.51■□□□□ 0.23
SDC2-205ENST00000520233 NANOGP8Q6NSW7 305 aa16.51■□□□□ 0.23
SDC2-205ENST00000520233 JMJD6Q6NYC1 403 aaPredicted RBP16.51■□□□□ 0.23
SDC2-205ENST00000520233 C8orf82Q6P1X6 216 aaPredicted RBP16.51■□□□□ 0.23
SDC2-205ENST00000520233 ANGPTL8Q6UXH0 198 aa16.51■□□□□ 0.23
SDC2-205ENST00000520233 CDRT4Q8N9R6 151 aa16.51■□□□□ 0.23
SDC2-205ENST00000520233 OR52N2Q8NGI0 321 aa16.51■□□□□ 0.23
SDC2-205ENST00000520233 NUBPLQ8TB37 319 aa16.51■□□□□ 0.23
SDC2-205ENST00000520233 MIPOL1Q8TD10 442 aa16.51■□□□□ 0.23
SDC2-205ENST00000520233 HOXB13Q92826 284 aaPredicted RBP16.51■□□□□ 0.23
SDC2-205ENST00000520233 C16orf58Q96GQ5 468 aa16.51■□□□□ 0.23
SDC2-205ENST00000520233 THOC3Q96J01 351 aaKnown RBP16.51■□□□□ 0.23
SDC2-205ENST00000520233 SH3GL1Q99961 368 aa16.51■□□□□ 0.23
SDC2-205ENST00000520233 HOPXQ9BPY8 73 aaPredicted RBP16.51■□□□□ 0.23
SDC2-205ENST00000520233 GPATCH1Q9BRR8 931 aaKnown RBP16.51■□□□□ 0.23
SDC2-205ENST00000520233 LMF2Q9BU23 707 aaKnown RBP16.51■□□□□ 0.23
SDC2-205ENST00000520233 ITPAQ9BY32 194 aa16.51■□□□□ 0.23
SDC2-205ENST00000520233 ACTRT3Q9BYD9 372 aa16.51■□□□□ 0.23
SDC2-205ENST00000520233 WWTR1Q9GZV5 400 aa16.51■□□□□ 0.23
SDC2-205ENST00000520233 RAD21L1Q9H4I0 556 aa16.51■□□□□ 0.23
SDC2-205ENST00000520233 NANOGQ9H9S0 305 aa16.51■□□□□ 0.23
SDC2-205ENST00000520233 FAF1Q9UNN5 650 aaPredicted RBP16.51■□□□□ 0.23
SDC2-205ENST00000520233 CORO2BQ9UQ03 480 aa16.51■□□□□ 0.23
SDC2-205ENST00000520233 DTX4Q9Y2E6 619 aa16.51■□□□□ 0.23
SDC2-205ENST00000520233 AKAP13Q12802 2813 aa16.5■□□□□ 0.23
SDC2-205ENST00000520233 EVPLLA8MZ36 301 aa16.5■□□□□ 0.23
SDC2-205ENST00000520233 NME6O75414 186 aaPredicted RBP16.5■□□□□ 0.23
SDC2-205ENST00000520233 SOX30O94993 753 aa16.5■□□□□ 0.23
SDC2-205ENST00000520233 UNC5CO95185 931 aa16.5■□□□□ 0.23
SDC2-205ENST00000520233 C1QCP02747 245 aa16.5■□□□□ 0.23
SDC2-205ENST00000520233 MATN1P21941 496 aa16.5■□□□□ 0.23
SDC2-205ENST00000520233 MAP3K8P41279 467 aa16.5■□□□□ 0.23
SDC2-205ENST00000520233 PPICP45877 212 aa16.5■□□□□ 0.23
SDC2-205ENST00000520233 MVDP53602 400 aa16.5■□□□□ 0.23
SDC2-205ENST00000520233 TXNL4AP83876 142 aaKnown RBP16.5■□□□□ 0.23
SDC2-205ENST00000520233 MXRA7P84157 204 aa16.5■□□□□ 0.23
SDC2-205ENST00000520233 ZNHIT3Q15649 155 aaPredicted RBP16.5■□□□□ 0.23
SDC2-205ENST00000520233 HLA-DQA1Q5Y7H0 255 aa16.5■□□□□ 0.23
SDC2-205ENST00000520233 H3F3CQ6NXT2 135 aa16.5■□□□□ 0.23
SDC2-205ENST00000520233 CDC73Q6P1J9 531 aa16.5■□□□□ 0.23
SDC2-205ENST00000520233 GPR155Q7Z3F1 870 aa16.5■□□□□ 0.23
SDC2-205ENST00000520233 RNF130Q86XS8 419 aa16.5■□□□□ 0.23
SDC2-205ENST00000520233 ZNF441Q8N8Z8 693 aa16.5■□□□□ 0.23
SDC2-205ENST00000520233 C17orf47Q8NEP4 570 aa16.5■□□□□ 0.23
SDC2-205ENST00000520233 OR8J3Q8NGG0 315 aa16.5■□□□□ 0.23
SDC2-205ENST00000520233 ADIPOR1Q96A54 375 aa16.5■□□□□ 0.23
SDC2-205ENST00000520233 TP53INP1Q96A56 240 aa16.5■□□□□ 0.23
SDC2-205ENST00000520233 CPPED1Q9BRF8 314 aaPredicted RBP16.5■□□□□ 0.23
SDC2-205ENST00000520233 SLC39A3Q9BRY0 314 aa16.5■□□□□ 0.23
SDC2-205ENST00000520233 LHPPQ9H008 270 aa16.5■□□□□ 0.23
SDC2-205ENST00000520233 ING2Q9H160 280 aa16.5■□□□□ 0.23
SDC2-205ENST00000520233 CPNE5Q9HCH3 593 aa16.5■□□□□ 0.23
SDC2-205ENST00000520233 GIN1Q9NXP7 522 aa16.5■□□□□ 0.23
SDC2-205ENST00000520233 NDE1Q9NXR1 346 aa16.5■□□□□ 0.23
SDC2-205ENST00000520233 GPR55Q9Y2T6 319 aaPredicted RBP16.5■□□□□ 0.23
SDC2-205ENST00000520233 C15orf38-AP3S2A0A0A6YYH1 394 aa16.49■□□□□ 0.23
SDC2-205ENST00000520233 TMEM200CA6NKL6 621 aa16.49■□□□□ 0.23
SDC2-205ENST00000520233 B2RBV5 119 aa16.49■□□□□ 0.23
SDC2-205ENST00000520233 HNRNPCL1O60812 293 aaKnown RBP16.49■□□□□ 0.23
SDC2-205ENST00000520233 NKX2-2O95096 273 aa16.49■□□□□ 0.23
SDC2-205ENST00000520233 ALOX5P09917 674 aa16.49■□□□□ 0.23
SDC2-205ENST00000520233 ACP2P11117 423 aa16.49■□□□□ 0.23
SDC2-205ENST00000520233 GPX2P18283 190 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms