RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 ACSBG2Q5FVE4 666 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 PCID2Q5JVF3 399 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 PRAMEF20Q5VT98 475 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 MZT2BQ6NZ67 158 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 MICALCLQ6ZW33 695 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 UBE2R2Q712K3 238 aaPredicted RBP4.43□□□□□ -1.7
SDCBP-207ENST00000520168 CCDC80Q76M96 950 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 SLC29A4Q7RTT9 530 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 PEX26Q7Z412 305 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 GRAMD2AQ8IUY3 354 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 PALM2Q8IXS6 379 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 TAGAPQ8N103 731 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 NKAIN3Q8N8D7 197 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 PRELID2Q8N945 189 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 NOA1Q8NC60 698 aaKnown RBP4.43□□□□□ -1.7
SDCBP-207ENST00000520168 TTLQ8NG68 377 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 OR52K1Q8NGK4 314 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 ACTRT1Q8TDG2 376 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 PTPMT1Q8WUK0 201 aaPredicted RBP4.43□□□□□ -1.7
SDCBP-207ENST00000520168 LPGAT1Q92604 370 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 KCNJ9Q92806 393 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 DIO2Q92813 273 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 GAL3ST3Q96A11 431 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 CFAP36Q96G28 342 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 SMIM10Q96HG1 83 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 TMEM41AQ96HV5 264 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 ZNF778Q96MU6 729 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 TMEM204Q9BSN7 226 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 SGPP1Q9BX95 441 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 HEMGNQ9BXL5 484 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 FUT8Q9BYC5 575 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 OSBPL8Q9BZF1 889 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 OR8D2Q9GZM6 311 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 IL22Q9GZX6 179 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 OR10A4Q9H209 315 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 CCDC68Q9H2F9 335 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 RHBGQ9H310 441 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 C10orf88Q9H8K7 445 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 VIPAS39Q9H9C1 493 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 FAIMQ9NVQ4 179 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 INTS10Q9NVR2 710 aaKnown RBP4.43□□□□□ -1.7
SDCBP-207ENST00000520168 MARCH4Q9P2E8 410 aaPredicted RBP4.43□□□□□ -1.7
SDCBP-207ENST00000520168 CLCF1Q9UBD9 225 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 TBK1Q9UHD2 729 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 KCNS2Q9ULS6 477 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 MAPRE3Q9UPY8 281 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 ZNF148Q9UQR1 794 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 DLGAP4Q9Y2H0 992 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 C15orf41Q9Y2V0 281 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 CLDN16Q9Y5I7 305 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 MAD1L1Q9Y6D9 718 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 CAPN6Q9Y6Q1 641 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 MALRD1Q5VYJ5 2156 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.42□□□□□ -1.7
SDCBP-207ENST00000520168 OR6C76A6NM76 312 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 DBX1A6NMT0 343 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 PRSS47A8MTI9 375 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 MIF4GDA9UHW6 222 aaKnown RBP4.42□□□□□ -1.7
SDCBP-207ENST00000520168 E7EVH7 732 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 CCDC188H7C350 402 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 PGRMC1O00264 195 aaKnown RBP4.42□□□□□ -1.7
SDCBP-207ENST00000520168 B3GALT2O43825 422 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 OR10H2O60403 315 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 LMX1BO60663 402 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 ZNF354AO60765 605 aaPredicted RBP4.42□□□□□ -1.7
SDCBP-207ENST00000520168 FTCDO95954 541 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 HIST1H2AGP0C0S8 130 aaPredicted RBP4.42□□□□□ -1.7
SDCBP-207ENST00000520168 RAC2P15153 192 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 NPPBP16860 134 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 TNNI3P19429 210 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 HIST1H2ADP20671 130 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 GSTT1P30711 240 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 CCKARP32238 428 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 CXCR5P32302 372 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 ATP6V1E1P36543 226 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 ACVR1BP36896 505 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 MSH2P43246 934 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 SLCO1A2P46721 670 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 COMPP49747 757 aaPredicted RBP4.42□□□□□ -1.7
SDCBP-207ENST00000520168 AP1S2P56377 157 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 RAB8AP61006 207 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 VSNL1P62760 191 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 CBX1P83916 185 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 TGM3Q08188 693 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 CSHL1Q14406 222 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 SPRED3Q2MJR0 410 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 ARMC4Q5T2S8 1044 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 DUPD1Q68J44 220 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 CYB5R2Q6BCY4 276 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 FAM166AQ6J272 317 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 C11orf63Q6NUN7 778 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 TMEM81Q6P7N7 255 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 TRIM40Q6P9F5 258 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 AAGABQ6PD74 315 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 AGTRAPQ6RW13 159 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 CLEC2AQ6UVW9 174 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 P4HA3Q7Z4N8 544 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 CILP2Q8IUL8 1156 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 IFT20Q8IY31 132 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 GCNT2Q8N0V5 402 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms