RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 NMNAT1Q9HAN9 279 aaPredicted RBP17.3■□□□□ 0.36
FAM49B-214ENST00000519540 CALML5Q9NZT1 146 aa17.3■□□□□ 0.36
FAM49B-214ENST00000519540 PLCL2Q9UPR0 1127 aa17.3■□□□□ 0.36
FAM49B-214ENST00000519540 DSPPQ9NZW4 1301 aa17.29■□□□□ 0.36
FAM49B-214ENST00000519540 FOXS1O43638 330 aa17.29■□□□□ 0.36
FAM49B-214ENST00000519540 CCNB2O95067 398 aa17.29■□□□□ 0.36
FAM49B-214ENST00000519540 LGI1O95970 557 aa17.29■□□□□ 0.36
FAM49B-214ENST00000519540 EEF1B2P24534 225 aaKnown RBP17.29■□□□□ 0.36
FAM49B-214ENST00000519540 CHRNEQ04844 493 aa17.29■□□□□ 0.36
FAM49B-214ENST00000519540 BNIP3Q12983 259 aa17.29■□□□□ 0.36
FAM49B-214ENST00000519540 TOP3AQ13472 1001 aaPredicted RBP17.29■□□□□ 0.36
FAM49B-214ENST00000519540 DEF8Q6ZN54 512 aa17.29■□□□□ 0.36
FAM49B-214ENST00000519540 C16orf62Q7Z3J2 963 aa17.29■□□□□ 0.36
FAM49B-214ENST00000519540 SLC25A45Q8N413 288 aa17.29■□□□□ 0.36
FAM49B-214ENST00000519540 OR9Q2Q8NGE9 314 aa17.29■□□□□ 0.36
FAM49B-214ENST00000519540 DHRS1Q96LJ7 313 aa17.29■□□□□ 0.36
FAM49B-214ENST00000519540 PITX2Q99697 317 aa17.29■□□□□ 0.36
FAM49B-214ENST00000519540 APOL4Q9BPW4 351 aa17.29■□□□□ 0.36
FAM49B-214ENST00000519540 ACAD8Q9UKU7 415 aa17.29■□□□□ 0.36
FAM49B-214ENST00000519540 POFUT2Q9Y2G5 429 aa17.29■□□□□ 0.36
FAM49B-214ENST00000519540 A0A087WV62 115 aa17.28■□□□□ 0.36
FAM49B-214ENST00000519540 AGR2O95994 175 aa17.28■□□□□ 0.36
FAM49B-214ENST00000519540 NT5EP21589 574 aa17.28■□□□□ 0.36
FAM49B-214ENST00000519540 HOXA6P31267 233 aa17.28■□□□□ 0.36
FAM49B-214ENST00000519540 MLLT3P42568 568 aaPredicted RBP17.28■□□□□ 0.36
FAM49B-214ENST00000519540 NDUFA9Q16795 377 aa17.28■□□□□ 0.36
FAM49B-214ENST00000519540 PRICKLE4Q2TBC4 344 aa17.28■□□□□ 0.36
FAM49B-214ENST00000519540 ZNF773Q6PK81 442 aa17.28■□□□□ 0.36
FAM49B-214ENST00000519540 CNIH3Q8TBE1 160 aa17.28■□□□□ 0.36
FAM49B-214ENST00000519540 CDS1Q92903 461 aa17.28■□□□□ 0.36
FAM49B-214ENST00000519540 ZDHHC12Q96GR4 267 aa17.28■□□□□ 0.36
FAM49B-214ENST00000519540 HRASLS5Q96KN8 279 aa17.28■□□□□ 0.36
FAM49B-214ENST00000519540 PINK1Q9BXM7 581 aa17.28■□□□□ 0.36
FAM49B-214ENST00000519540 CHRNA10Q9GZZ6 450 aa17.28■□□□□ 0.36
FAM49B-214ENST00000519540 QRSL1Q9H0R6 528 aaKnown RBP17.28■□□□□ 0.36
FAM49B-214ENST00000519540 CSNK1G3Q9Y6M4 447 aa17.28■□□□□ 0.36
FAM49B-214ENST00000519540 PCDH15Q96QU1 1955 aa17.28■□□□□ 0.36
FAM49B-214ENST00000519540 ARRDC5A6NEK1 342 aa17.28■□□□□ 0.36
FAM49B-214ENST00000519540 H3BSA7 217 aa17.28■□□□□ 0.36
FAM49B-214ENST00000519540 M0R3H8 397 aa17.28■□□□□ 0.36
FAM49B-214ENST00000519540 CASC3O15234 703 aaKnown RBP17.28■□□□□ 0.36
FAM49B-214ENST00000519540 PLOD3O60568 738 aa17.28■□□□□ 0.36
FAM49B-214ENST00000519540 SLITRK5O94991 958 aa17.28■□□□□ 0.36
FAM49B-214ENST00000519540 PAX7P23759 505 aa17.28■□□□□ 0.36
FAM49B-214ENST00000519540 MGAT2Q10469 447 aa17.28■□□□□ 0.36
FAM49B-214ENST00000519540 FOXD4Q12950 439 aaPredicted RBP17.28■□□□□ 0.36
FAM49B-214ENST00000519540 TAGAPQ8N103 731 aa17.28■□□□□ 0.36
FAM49B-214ENST00000519540 DOK4Q8TEW6 326 aa17.28■□□□□ 0.36
FAM49B-214ENST00000519540 SLC9A6Q92581 669 aa17.28■□□□□ 0.36
FAM49B-214ENST00000519540 ZG16BQ96DA0 208 aa17.28■□□□□ 0.36
FAM49B-214ENST00000519540 PDE7BQ9NP56 450 aa17.28■□□□□ 0.36
FAM49B-214ENST00000519540 SOHLH2Q9NX45 425 aa17.28■□□□□ 0.36
FAM49B-214ENST00000519540 SLC9A8Q9Y2E8 581 aa17.28■□□□□ 0.36
FAM49B-214ENST00000519540 CEPT1Q9Y6K0 416 aa17.28■□□□□ 0.36
FAM49B-214ENST00000519540 CCDC163A0A0D9SF12 145 aa17.27■□□□□ 0.36
FAM49B-214ENST00000519540 HYKKA2RU49 373 aa17.27■□□□□ 0.36
FAM49B-214ENST00000519540 NUDT21O43809 227 aaKnown RBP17.27■□□□□ 0.36
FAM49B-214ENST00000519540 FCMRO60667 390 aa17.27■□□□□ 0.36
FAM49B-214ENST00000519540 ZIC2O95409 532 aaPredicted RBP17.27■□□□□ 0.36
FAM49B-214ENST00000519540 CBLP22681 906 aa17.27■□□□□ 0.36
FAM49B-214ENST00000519540 CTSKP43235 329 aa17.27■□□□□ 0.36
FAM49B-214ENST00000519540 FNTBP49356 437 aa17.27■□□□□ 0.36
FAM49B-214ENST00000519540 OR1D5P58170 312 aa17.27■□□□□ 0.36
FAM49B-214ENST00000519540 SKP1P63208 163 aa17.27■□□□□ 0.36
FAM49B-214ENST00000519540 FAM53BQ14153 422 aa17.27■□□□□ 0.36
FAM49B-214ENST00000519540 ZNF770Q6IQ21 691 aaPredicted RBP17.27■□□□□ 0.36
FAM49B-214ENST00000519540 CCDC71Q8IV32 467 aaPredicted RBP17.27■□□□□ 0.36
FAM49B-214ENST00000519540 ZNF675Q8TD23 568 aa17.27■□□□□ 0.36
FAM49B-214ENST00000519540 CD180Q99467 661 aa17.27■□□□□ 0.36
FAM49B-214ENST00000519540 ZNF556Q9HAH1 456 aa17.27■□□□□ 0.36
FAM49B-214ENST00000519540 MAT2BQ9NZL9 334 aa17.27■□□□□ 0.36
FAM49B-214ENST00000519540 BLOC1S6Q9UL45 172 aa17.27■□□□□ 0.36
FAM49B-214ENST00000519540 A4GNTQ9UNA3 340 aa17.27■□□□□ 0.36
FAM49B-214ENST00000519540 TRBV4-1A0A0J9YWV2 114 aa17.26■□□□□ 0.35
FAM49B-214ENST00000519540 SLC1A7O00341 560 aa17.26■□□□□ 0.35
FAM49B-214ENST00000519540 ZBTB11O95625 1053 aaPredicted RBP17.26■□□□□ 0.35
FAM49B-214ENST00000519540 ALPPP05187 535 aa17.26■□□□□ 0.35
FAM49B-214ENST00000519540 H1F0P07305 194 aaKnown RBP17.26■□□□□ 0.35
FAM49B-214ENST00000519540 IFI6P09912 130 aa17.26■□□□□ 0.35
FAM49B-214ENST00000519540 SLC35E2P0CK97 266 aa17.26■□□□□ 0.35
FAM49B-214ENST00000519540 GIMD1P0DJR0 217 aa17.26■□□□□ 0.35
FAM49B-214ENST00000519540 ACP2P11117 423 aa17.26■□□□□ 0.35
FAM49B-214ENST00000519540 RNH1P13489 461 aaKnown RBP17.26■□□□□ 0.35
FAM49B-214ENST00000519540 PDX1P52945 283 aa17.26■□□□□ 0.35
FAM49B-214ENST00000519540 GABARAPL2P60520 117 aa17.26■□□□□ 0.35
FAM49B-214ENST00000519540 ESRRGP62508 458 aa17.26■□□□□ 0.35
FAM49B-214ENST00000519540 DUSP5Q16690 384 aa17.26■□□□□ 0.35
FAM49B-214ENST00000519540 ARHGAP11BQ3KRB8 267 aa17.26■□□□□ 0.35
FAM49B-214ENST00000519540 ZNF311Q5JNZ3 666 aa17.26■□□□□ 0.35
FAM49B-214ENST00000519540 EXOSC6Q5RKV6 272 aaKnown RBP17.26■□□□□ 0.35
FAM49B-214ENST00000519540 GARNL3Q5VVW2 1013 aa17.26■□□□□ 0.35
FAM49B-214ENST00000519540 NIPAL1Q6NVV3 410 aa17.26■□□□□ 0.35
FAM49B-214ENST00000519540 KCTD8Q6ZWB6 473 aa17.26■□□□□ 0.35
FAM49B-214ENST00000519540 MAFAQ8NHW3 353 aaPredicted RBP17.26■□□□□ 0.35
FAM49B-214ENST00000519540 ZNF566Q969W8 418 aa17.26■□□□□ 0.35
FAM49B-214ENST00000519540 CTHRC1Q96CG8 243 aa17.26■□□□□ 0.35
FAM49B-214ENST00000519540 TSC22D3Q99576 134 aa17.26■□□□□ 0.35
FAM49B-214ENST00000519540 ADAP2Q9NPF8 381 aa17.26■□□□□ 0.35
FAM49B-214ENST00000519540 HCN3Q9P1Z3 774 aa17.26■□□□□ 0.35
FAM49B-214ENST00000519540 KLHL3Q9UH77 587 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms