RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 ATP6AP2A0A1C7CYW4 349 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 CCDC151A5D8V7 595 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 GOLGA6L10A6NI86 522 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 PCDH7O60245 1069 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 SUSD5O60279 629 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 TRIM13O60858 407 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 TRIM3O75382 744 aaPredicted RBP8.58□□□□□ -1.04
HDAC3-215ENST00000519474 NME6O75414 186 aaPredicted RBP8.58□□□□□ -1.04
HDAC3-215ENST00000519474 ATP6AP2O75787 350 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 LRATO95237 230 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 TPOP07202 933 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 ABCB1P08183 1280 aaPredicted RBP8.58□□□□□ -1.04
HDAC3-215ENST00000519474 FGF4P08620 206 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 ANXA4P09525 319 aaPredicted RBP8.58□□□□□ -1.04
HDAC3-215ENST00000519474 NUDT17P0C025 328 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 PRF1P14222 555 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 CREB1P16220 341 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 ZNF16P17020 682 aaPredicted RBP8.58□□□□□ -1.04
HDAC3-215ENST00000519474 NAGAP17050 411 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 DRD5P21918 477 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 GPX3P22352 226 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 ALDH3A1P30838 453 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 CASP3P42574 277 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 KIR3DL1P43629 444 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 PPICP45877 212 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 SMSP52788 366 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 FBXW4P57775 412 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 TAF11Q15544 211 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 LTB4RQ15722 352 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 CEBPEQ15744 281 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 SPIN4Q56A73 249 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 SPDYAQ5MJ70 313 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 PRAMEF20Q5VT98 475 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 FNDC7Q5VTL7 733 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 HLA-DQA1Q5Y7H0 255 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 BICRALQ6AI39 1079 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 TMEM211Q6ICI0 200 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 FAM71E1Q6IPT2 247 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 WDR93Q6P2C0 686 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 ARHGAP11AQ6P4F7 1023 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 NUP54Q7Z3B4 507 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 TRABD2AQ86V40 505 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 CD163Q86VB7 1156 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 DND1Q8IYX4 353 aaKnown RBP8.58□□□□□ -1.04
HDAC3-215ENST00000519474 PRR22Q8IZ63 422 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 VWA5B2Q8N398 1253 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 FBXW8Q8N3Y1 598 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 FAM109AQ8N4B1 249 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 RPRMLQ8N4K4 120 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 MARVELD2Q8N4S9 558 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 FAM13CQ8NE31 585 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 C17orf47Q8NEP4 570 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 AENQ8WTP8 325 aaKnown RBP8.58□□□□□ -1.04
HDAC3-215ENST00000519474 KLHL29Q96CT2 875 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 SH3GL1Q99961 368 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 ANGPTL4Q9BY76 406 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 ROPN1BQ9BZX4 212 aaPredicted RBP8.58□□□□□ -1.04
HDAC3-215ENST00000519474 ROPN1Q9HAT0 212 aaPredicted RBP8.58□□□□□ -1.04
HDAC3-215ENST00000519474 ZFP64Q9NPA5 681 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 ACKR4Q9NPB9 350 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 SLC35C2Q9NQQ7 365 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 MKS1Q9NXB0 559 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 TAS2R7Q9NYW3 318 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 BCAP29Q9UHQ4 241 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 NCOA6Q14686 2063 aaPredicted RBP8.58□□□□□ -1.04
HDAC3-215ENST00000519474 PCNX1Q96RV3 2341 aa8.58□□□□□ -1.04
HDAC3-215ENST00000519474 ZNF407Q9C0G0 2248 aa8.57□□□□□ -1.04
HDAC3-215ENST00000519474 GNG14A0A1W2PPG7 69 aa8.57□□□□□ -1.04
HDAC3-215ENST00000519474 LRRC3CA6NJW4 275 aa8.57□□□□□ -1.04
HDAC3-215ENST00000519474 CAPN14A8MX76 684 aa8.57□□□□□ -1.04
HDAC3-215ENST00000519474 H3BQF6 201 aa8.57□□□□□ -1.04
HDAC3-215ENST00000519474 C19orf84I3L1E1 186 aa8.57□□□□□ -1.04
HDAC3-215ENST00000519474 ACOT7O00154 380 aa8.57□□□□□ -1.04
HDAC3-215ENST00000519474 TP53I11O14683 189 aa8.57□□□□□ -1.04
HDAC3-215ENST00000519474 SLU7O95391 586 aaKnown RBP8.57□□□□□ -1.04
HDAC3-215ENST00000519474 CLDN14O95500 239 aa8.57□□□□□ -1.04
HDAC3-215ENST00000519474 UROSP10746 265 aa8.57□□□□□ -1.04
HDAC3-215ENST00000519474 PCSK2P16519 638 aa8.57□□□□□ -1.04
HDAC3-215ENST00000519474 ABCD3P28288 659 aa8.57□□□□□ -1.04
HDAC3-215ENST00000519474 TIA1P31483 386 aaKnown RBP eCLIP8.57□□□□□ -1.04
HDAC3-215ENST00000519474 PTGDSP41222 190 aa8.57□□□□□ -1.04
HDAC3-215ENST00000519474 PMPCAQ10713 525 aa8.57□□□□□ -1.04
HDAC3-215ENST00000519474 HEPACAMQ14CZ8 416 aa8.57□□□□□ -1.04
HDAC3-215ENST00000519474 PCLAFQ15004 111 aa8.57□□□□□ -1.04
HDAC3-215ENST00000519474 UGT3A2Q3SY77 523 aa8.57□□□□□ -1.04
HDAC3-215ENST00000519474 ZNF628Q5EBL2 1059 aa8.57□□□□□ -1.04
HDAC3-215ENST00000519474 CFAP157Q5JU67 520 aa8.57□□□□□ -1.04
HDAC3-215ENST00000519474 LIPMQ5VYY2 423 aa8.57□□□□□ -1.04
HDAC3-215ENST00000519474 TMEM198Q66K66 360 aa8.57□□□□□ -1.04
HDAC3-215ENST00000519474 CLEC6AQ6EIG7 209 aa8.57□□□□□ -1.04
HDAC3-215ENST00000519474 RTL6Q6ICC9 239 aa8.57□□□□□ -1.04
HDAC3-215ENST00000519474 NOXRED1Q6NXP6 359 aa8.57□□□□□ -1.04
HDAC3-215ENST00000519474 CCBE1Q6UXH8 406 aaPredicted RBP8.57□□□□□ -1.04
HDAC3-215ENST00000519474 LRRC25Q8N386 305 aaPredicted RBP8.57□□□□□ -1.04
HDAC3-215ENST00000519474 CCDC63Q8NA47 563 aa8.57□□□□□ -1.04
HDAC3-215ENST00000519474 OR52R1Q8NGF1 315 aa8.57□□□□□ -1.04
HDAC3-215ENST00000519474 OR5M9Q8NGP3 310 aa8.57□□□□□ -1.04
HDAC3-215ENST00000519474 ZNF675Q8TD23 568 aa8.57□□□□□ -1.04
HDAC3-215ENST00000519474 DIO2Q92813 273 aa8.57□□□□□ -1.04
HDAC3-215ENST00000519474 KAT2AQ92830 837 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms