RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 NSA2O95478 260 aaKnown RBP13.56□□□□□ -0.24
CLN8-204ENST00000519254 CLIC3O95833 236 aa13.56□□□□□ -0.24
CLN8-204ENST00000519254 RECKO95980 971 aa13.56□□□□□ -0.24
CLN8-204ENST00000519254 HMGN2P05204 90 aaKnown RBP13.56□□□□□ -0.24
CLN8-204ENST00000519254 FHP07954 510 aa13.56□□□□□ -0.24
CLN8-204ENST00000519254 SMIM18P0DKX4 95 aa13.56□□□□□ -0.24
CLN8-204ENST00000519254 MATN1P21941 496 aa13.56□□□□□ -0.24
CLN8-204ENST00000519254 TLX1P31314 330 aaPredicted RBP13.56□□□□□ -0.24
CLN8-204ENST00000519254 MAGEA8P43361 318 aa13.56□□□□□ -0.24
CLN8-204ENST00000519254 XKP51811 444 aa13.56□□□□□ -0.24
CLN8-204ENST00000519254 PRKAG1P54619 331 aa13.56□□□□□ -0.24
CLN8-204ENST00000519254 LTB4RQ15722 352 aa13.56□□□□□ -0.24
CLN8-204ENST00000519254 SYT16Q17RD7 645 aa13.56□□□□□ -0.24
CLN8-204ENST00000519254 CYP27C1Q4G0S4 372 aa13.56□□□□□ -0.24
CLN8-204ENST00000519254 IFI44LQ53G44 452 aa13.56□□□□□ -0.24
CLN8-204ENST00000519254 C1orf189Q5VU69 101 aa13.56□□□□□ -0.24
CLN8-204ENST00000519254 SLC44A2Q8IWA5 706 aaPredicted RBP13.56□□□□□ -0.24
CLN8-204ENST00000519254 OR4N5Q8IXE1 308 aa13.56□□□□□ -0.24
CLN8-204ENST00000519254 OR4K14Q8NGD5 310 aa13.56□□□□□ -0.24
CLN8-204ENST00000519254 OR56A1Q8NGH5 318 aa13.56□□□□□ -0.24
CLN8-204ENST00000519254 SPPL2AQ8TCT8 520 aa13.56□□□□□ -0.24
CLN8-204ENST00000519254 LZICQ8WZA0 190 aa13.56□□□□□ -0.24
CLN8-204ENST00000519254 MOAP1Q96BY2 351 aa13.56□□□□□ -0.24
CLN8-204ENST00000519254 THUMPD1Q9NXG2 353 aaKnown RBP13.56□□□□□ -0.24
CLN8-204ENST00000519254 NDUFAF4Q9P032 175 aa13.56□□□□□ -0.24
CLN8-204ENST00000519254 IFT80Q9P2H3 777 aaPredicted RBP13.56□□□□□ -0.24
CLN8-204ENST00000519254 TMEFF2Q9UIK5 374 aaPredicted RBP13.56□□□□□ -0.24
CLN8-204ENST00000519254 SPACA6W5XKT8 324 aa13.56□□□□□ -0.24
CLN8-204ENST00000519254 EP300Q09472 2414 aaPredicted RBP13.56□□□□□ -0.24
CLN8-204ENST00000519254 SPAARA0A1B0GVQ0 90 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 C5orf58C9J3I9 102 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 FAM227AF5H4B4 570 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 H0YAE9 185 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 CYR61O00622 381 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 CHST10O43529 356 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 SCRG1O75711 98 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 TIAF1O95411 115 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 ALBP02768 609 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 CCL4P13236 92 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 FPR1P21462 350 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 DNAJA1P31689 397 aaKnown RBP13.55□□□□□ -0.24
CLN8-204ENST00000519254 MC3RP41968 323 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 OR1D4P47884 311 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 OR1E2P47887 323 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 EMP3P54852 163 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 SYPL1Q16563 259 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 KRT80Q6KB66 452 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 PWWP2BQ6NUJ5 590 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 BHLHB9Q6PI77 547 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 PPP1R3BQ86XI6 285 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 COL27A1Q8IZC6 1860 aaPredicted RBP13.55□□□□□ -0.24
CLN8-204ENST00000519254 SMYD1Q8NB12 490 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 TMEM52Q8NDY8 209 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 MIPOL1Q8TD10 442 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.55□□□□□ -0.24
CLN8-204ENST00000519254 XAGE5Q8WWM1 108 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 KAT2AQ92830 837 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 C16orf58Q96GQ5 468 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 PEX11GQ96HA9 241 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 RDH12Q96NR8 316 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 MBOAT4Q96T53 435 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 YIPF4Q9BSR8 244 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 YIPF2Q9BWQ6 316 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 GABARAPL1Q9H0R8 117 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 TOR3AQ9H497 397 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 ANKRA2Q9H9E1 313 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 PNPLA3Q9NST1 481 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 TRPC4Q9UBN4 977 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 TMEM184BQ9Y519 407 aaPredicted RBP13.55□□□□□ -0.24
CLN8-204ENST00000519254 MFN2O95140 757 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 CD247P20963 164 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 CCKBRP32239 447 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 SOX18P35713 384 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 KHKP50053 298 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 PRR5P85299 388 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 LASP1Q14847 261 aaKnown RBP13.55□□□□□ -0.24
CLN8-204ENST00000519254 LAPTM4AQ15012 233 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 DUSP7Q16829 419 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 ARMC8Q8IUR7 673 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 SAMD14Q8IZD0 417 aaPredicted RBP13.55□□□□□ -0.24
CLN8-204ENST00000519254 ST13P4Q8IZP2 240 aaPredicted RBP13.55□□□□□ -0.24
CLN8-204ENST00000519254 LRRC25Q8N386 305 aaPredicted RBP13.55□□□□□ -0.24
CLN8-204ENST00000519254 NUP43Q8NFH3 380 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 APOBEC4Q8WW27 367 aaKnown RBP13.55□□□□□ -0.24
CLN8-204ENST00000519254 NRBF2Q96F24 287 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 OTUB1Q96FW1 271 aaPredicted RBP13.55□□□□□ -0.24
CLN8-204ENST00000519254 NPLQ9BXD5 320 aaPredicted RBP13.55□□□□□ -0.24
CLN8-204ENST00000519254 STRADBQ9C0K7 418 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 C3orf14Q9HBI5 128 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 THSD1Q9NS62 852 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 AKAP7Q9P0M2 348 aaPredicted RBP13.55□□□□□ -0.24
CLN8-204ENST00000519254 NTMQ9P121 344 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 P2RX2Q9UBL9 471 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 SAMHD1Q9Y3Z3 626 aaKnown RBP13.55□□□□□ -0.24
CLN8-204ENST00000519254 PCDHGA1Q9Y5H4 931 aa13.55□□□□□ -0.24
CLN8-204ENST00000519254 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.54□□□□□ -0.24
CLN8-204ENST00000519254 H3BNH8 94 aa13.54□□□□□ -0.24
CLN8-204ENST00000519254 DSCR3O14972 297 aa13.54□□□□□ -0.24
CLN8-204ENST00000519254 POLR1CO15160 346 aaPredicted RBP13.54□□□□□ -0.24
CLN8-204ENST00000519254 SLC28A2O43868 658 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms