RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 ZNF420Q8TAQ5 688 aaPredicted RBP24.89■■□□□ 1.57
COL13A1-210ENST00000517713 HSPA12BQ96MM6 686 aa24.89■■□□□ 1.57
COL13A1-210ENST00000517713 CCDC90BQ9GZT6 254 aa24.89■■□□□ 1.57
COL13A1-210ENST00000517713 DUSP21Q9H596 190 aa24.89■■□□□ 1.57
COL13A1-210ENST00000517713 ENOPH1Q9UHY7 261 aa24.89■■□□□ 1.57
COL13A1-210ENST00000517713 SLC9B1P1A6NJY1 282 aa24.88■■□□□ 1.57
COL13A1-210ENST00000517713 CASC3O15234 703 aaKnown RBP24.88■■□□□ 1.57
COL13A1-210ENST00000517713 LDB3O75112 727 aa24.88■■□□□ 1.57
COL13A1-210ENST00000517713 SEC14L2O76054 403 aa24.88■■□□□ 1.57
COL13A1-210ENST00000517713 GSSP48637 474 aa24.88■■□□□ 1.57
COL13A1-210ENST00000517713 CHRNEQ04844 493 aa24.88■■□□□ 1.57
COL13A1-210ENST00000517713 SMN1Q16637 294 aaKnown RBP24.88■■□□□ 1.57
COL13A1-210ENST00000517713 CDC73Q6P1J9 531 aa24.88■■□□□ 1.57
COL13A1-210ENST00000517713 MCATQ8IVS2 390 aaKnown RBP24.88■■□□□ 1.57
COL13A1-210ENST00000517713 TMEM52Q8NDY8 209 aa24.88■■□□□ 1.57
COL13A1-210ENST00000517713 QRSL1Q9H0R6 528 aaKnown RBP24.88■■□□□ 1.57
COL13A1-210ENST00000517713 A4GNTQ9UNA3 340 aa24.88■■□□□ 1.57
COL13A1-210ENST00000517713 DNAH14Q0VDD8 3507 aa24.88■■□□□ 1.57
COL13A1-210ENST00000517713 SGK494L7N484 410 aa24.88■■□□□ 1.57
COL13A1-210ENST00000517713 FGF17O60258 216 aa24.88■■□□□ 1.57
COL13A1-210ENST00000517713 WBP4O75554 376 aaKnown RBP24.88■■□□□ 1.57
COL13A1-210ENST00000517713 OXSR1O95747 527 aaPredicted RBP24.88■■□□□ 1.57
COL13A1-210ENST00000517713 SLC35A2P78381 396 aa24.88■■□□□ 1.57
COL13A1-210ENST00000517713 TUBA3CQ13748 450 aa24.88■■□□□ 1.57
COL13A1-210ENST00000517713 FAM214AQ32MH5 1076 aa24.88■■□□□ 1.57
COL13A1-210ENST00000517713 ERI1Q8IV48 349 aaKnown RBP24.88■■□□□ 1.57
COL13A1-210ENST00000517713 CAMKK1Q8N5S9 505 aa24.88■■□□□ 1.57
COL13A1-210ENST00000517713 SLC16A11Q8NCK7 471 aa24.88■■□□□ 1.57
COL13A1-210ENST00000517713 FAM81AQ8TBF8 368 aa24.88■■□□□ 1.57
COL13A1-210ENST00000517713 APH1BQ8WW43 257 aa24.88■■□□□ 1.57
COL13A1-210ENST00000517713 TANKQ92844 425 aa24.88■■□□□ 1.57
COL13A1-210ENST00000517713 SLC38A3Q99624 504 aa24.88■■□□□ 1.57
COL13A1-210ENST00000517713 LDHAL6BQ9BYZ2 381 aaPredicted RBP24.88■■□□□ 1.57
COL13A1-210ENST00000517713 LHPPQ9H008 270 aa24.88■■□□□ 1.57
COL13A1-210ENST00000517713 SLC24A3Q9HC58 644 aa24.88■■□□□ 1.57
COL13A1-210ENST00000517713 ERVK-18Q9QC07 812 aa24.88■■□□□ 1.57
COL13A1-210ENST00000517713 DSPPQ9NZW4 1301 aa24.87■■□□□ 1.57
COL13A1-210ENST00000517713 FAM227AF5H4B4 570 aa24.87■■□□□ 1.57
COL13A1-210ENST00000517713 FAAHO00519 579 aa24.87■■□□□ 1.57
COL13A1-210ENST00000517713 FAM20BO75063 409 aa24.87■■□□□ 1.57
COL13A1-210ENST00000517713 AGR2O95994 175 aa24.87■■□□□ 1.57
COL13A1-210ENST00000517713 PROS1P07225 676 aa24.87■■□□□ 1.57
COL13A1-210ENST00000517713 CTSBP07858 339 aa24.87■■□□□ 1.57
COL13A1-210ENST00000517713 CAPZBP47756 277 aa24.87■■□□□ 1.57
COL13A1-210ENST00000517713 ROR2Q01974 943 aaKnown RBP24.87■■□□□ 1.57
COL13A1-210ENST00000517713 SEC23BQ15437 767 aa24.87■■□□□ 1.57
COL13A1-210ENST00000517713 ZNF628Q5EBL2 1059 aa24.87■■□□□ 1.57
COL13A1-210ENST00000517713 C12orf43Q96C57 262 aaKnown RBP24.87■■□□□ 1.57
COL13A1-210ENST00000517713 LIN28AQ9H9Z2 209 aaKnown RBP24.87■■□□□ 1.57
COL13A1-210ENST00000517713 ANKHQ9HCJ1 492 aa24.87■■□□□ 1.57
COL13A1-210ENST00000517713 STK25O00506 426 aa24.86■■□□□ 1.57
COL13A1-210ENST00000517713 GPR75O95800 540 aa24.86■■□□□ 1.57
COL13A1-210ENST00000517713 ALPPP05187 535 aa24.86■■□□□ 1.57
COL13A1-210ENST00000517713 PCMT1P22061 227 aa24.86■■□□□ 1.57
COL13A1-210ENST00000517713 KRT20P35900 424 aa24.86■■□□□ 1.57
COL13A1-210ENST00000517713 PIN1Q13526 163 aaPredicted RBP24.86■■□□□ 1.57
COL13A1-210ENST00000517713 NPTX1Q15818 432 aa24.86■■□□□ 1.57
COL13A1-210ENST00000517713 ZNF311Q5JNZ3 666 aa24.86■■□□□ 1.57
COL13A1-210ENST00000517713 GTF2IRD2BQ6EKJ0 949 aa24.86■■□□□ 1.57
COL13A1-210ENST00000517713 HEPHL1Q6MZM0 1159 aa24.86■■□□□ 1.57
COL13A1-210ENST00000517713 KLHL17Q6TDP4 642 aa24.86■■□□□ 1.57
COL13A1-210ENST00000517713 GTF2IRD2Q86UP8 949 aa24.86■■□□□ 1.57
COL13A1-210ENST00000517713 ZNF540Q8NDQ6 660 aa24.86■■□□□ 1.57
COL13A1-210ENST00000517713 SIMC1Q8NDZ2 872 aa24.86■■□□□ 1.57
COL13A1-210ENST00000517713 TBC1D17Q9HA65 648 aa24.86■■□□□ 1.57
COL13A1-210ENST00000517713 CLCA2Q9UQC9 943 aa24.86■■□□□ 1.57
COL13A1-210ENST00000517713 TRIOBPQ9H2D6 2365 aa24.86■■□□□ 1.57
COL13A1-210ENST00000517713 LILRA5A6NI73 299 aa24.86■■□□□ 1.57
COL13A1-210ENST00000517713 AQP9O43315 295 aa24.86■■□□□ 1.57
COL13A1-210ENST00000517713 UGT2B17O75795 530 aa24.86■■□□□ 1.57
COL13A1-210ENST00000517713 ATP1B1P05026 303 aa24.86■■□□□ 1.57
COL13A1-210ENST00000517713 FOSL2P15408 326 aa24.86■■□□□ 1.57
COL13A1-210ENST00000517713 SOX18P35713 384 aa24.86■■□□□ 1.57
COL13A1-210ENST00000517713 RAB38P57729 211 aa24.86■■□□□ 1.57
COL13A1-210ENST00000517713 NXPH1P58417 271 aa24.86■■□□□ 1.57
COL13A1-210ENST00000517713 CSNK2BP67870 215 aa24.86■■□□□ 1.57
COL13A1-210ENST00000517713 PUS10Q3MIT2 529 aaKnown RBP24.86■■□□□ 1.57
COL13A1-210ENST00000517713 TRMT12Q53H54 448 aaKnown RBP24.86■■□□□ 1.57
COL13A1-210ENST00000517713 ARHGEF39Q8N4T4 335 aa24.86■■□□□ 1.57
COL13A1-210ENST00000517713 DNAJC22Q8N4W6 341 aa24.86■■□□□ 1.57
COL13A1-210ENST00000517713 OR6T1Q8NGN1 323 aa24.86■■□□□ 1.57
COL13A1-210ENST00000517713 SLC9A6Q92581 669 aa24.86■■□□□ 1.57
COL13A1-210ENST00000517713 SPACA7Q96KW9 195 aa24.86■■□□□ 1.57
COL13A1-210ENST00000517713 DOK1Q99704 481 aa24.86■■□□□ 1.57
COL13A1-210ENST00000517713 MAP3K3Q99759 626 aa24.86■■□□□ 1.57
COL13A1-210ENST00000517713 C19orf53Q9UNZ5 99 aaPredicted RBP24.86■■□□□ 1.57
COL13A1-210ENST00000517713 PCDHGB1Q9Y5G3 927 aa24.86■■□□□ 1.57
COL13A1-210ENST00000517713 ADAP00813 363 aa24.85■■□□□ 1.57
COL13A1-210ENST00000517713 HNRNPKP61978 463 aaKnown RBP eCLIP24.85■■□□□ 1.57
COL13A1-210ENST00000517713 FHL5Q5TD97 284 aa24.85■■□□□ 1.57
COL13A1-210ENST00000517713 CDS1Q92903 461 aa24.85■■□□□ 1.57
COL13A1-210ENST00000517713 MUL1Q969V5 352 aa24.85■■□□□ 1.57
COL13A1-210ENST00000517713 ZG16BQ96DA0 208 aa24.85■■□□□ 1.57
COL13A1-210ENST00000517713 FUZQ9BT04 418 aa24.85■■□□□ 1.57
COL13A1-210ENST00000517713 FNDC11Q9BVV2 318 aa24.85■■□□□ 1.57
COL13A1-210ENST00000517713 MGAT4BQ9UQ53 548 aa24.85■■□□□ 1.57
COL13A1-210ENST00000517713 NINQ8N4C6 2090 aa24.85■■□□□ 1.57
COL13A1-210ENST00000517713 RDH16O75452 317 aa24.85■■□□□ 1.57
COL13A1-210ENST00000517713 ITIH1P19827 911 aa24.85■■□□□ 1.57
COL13A1-210ENST00000517713 IDH2P48735 452 aaKnown RBP24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms