RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 DUSP8Q13202 625 aa12.52□□□□□ -0.41
TCOF1-215ENST00000515516 TRMT12Q53H54 448 aaKnown RBP12.52□□□□□ -0.41
TCOF1-215ENST00000515516 RIPPLY2Q5TAB7 128 aa12.52□□□□□ -0.41
TCOF1-215ENST00000515516 BICRALQ6AI39 1079 aa12.52□□□□□ -0.41
TCOF1-215ENST00000515516 RTL6Q6ICC9 239 aa12.52□□□□□ -0.41
TCOF1-215ENST00000515516 SLC30A6Q6NXT4 461 aa12.52□□□□□ -0.41
TCOF1-215ENST00000515516 FAM180BQ6P0A1 224 aa12.52□□□□□ -0.41
TCOF1-215ENST00000515516 SCIMPQ6UWF3 145 aa12.52□□□□□ -0.41
TCOF1-215ENST00000515516 ZYG11AQ6WRX3 759 aa12.52□□□□□ -0.41
TCOF1-215ENST00000515516 GSPT2Q8IYD1 628 aaKnown RBP12.52□□□□□ -0.41
TCOF1-215ENST00000515516 PM20D2Q8IYS1 436 aa12.52□□□□□ -0.41
TCOF1-215ENST00000515516 OR1J4Q8NGS1 313 aa12.52□□□□□ -0.41
TCOF1-215ENST00000515516 C16orf78Q8WTQ4 265 aa12.52□□□□□ -0.41
TCOF1-215ENST00000515516 EXOSC8Q96B26 276 aaKnown RBP12.52□□□□□ -0.41
TCOF1-215ENST00000515516 ERP27Q96DN0 273 aa12.52□□□□□ -0.41
TCOF1-215ENST00000515516 OMA1Q96E52 524 aa12.52□□□□□ -0.41
TCOF1-215ENST00000515516 DTNBP1Q96EV8 351 aa12.52□□□□□ -0.41
TCOF1-215ENST00000515516 APIPQ96GX9 242 aa12.52□□□□□ -0.41
TCOF1-215ENST00000515516 TMEM41AQ96HV5 264 aa12.52□□□□□ -0.41
TCOF1-215ENST00000515516 ZNF681Q96N22 645 aa12.52□□□□□ -0.41
TCOF1-215ENST00000515516 GNRHR2Q96P88 292 aa12.52□□□□□ -0.41
TCOF1-215ENST00000515516 BBS4Q96RK4 519 aa12.52□□□□□ -0.41
TCOF1-215ENST00000515516 SHCBP1LQ9BZQ2 653 aa12.52□□□□□ -0.41
TCOF1-215ENST00000515516 KLRF1Q9NZS2 232 aa12.52□□□□□ -0.41
TCOF1-215ENST00000515516 HEY2Q9UBP5 337 aa12.52□□□□□ -0.41
TCOF1-215ENST00000515516 GRID1Q9ULK0 1009 aa12.52□□□□□ -0.41
TCOF1-215ENST00000515516 C15orf41Q9Y2V0 281 aa12.52□□□□□ -0.41
TCOF1-215ENST00000515516 FAM215AQ9Y5M1 114 aa12.52□□□□□ -0.41
TCOF1-215ENST00000515516 CREBBPQ92793 2442 aa12.52□□□□□ -0.41
TCOF1-215ENST00000515516 ITPR2Q14571 2701 aa12.52□□□□□ -0.41
TCOF1-215ENST00000515516 MYO9AB2RTY4 2548 aa12.51□□□□□ -0.41
TCOF1-215ENST00000515516 A0A0G2JNJ9 132 aa12.51□□□□□ -0.41
TCOF1-215ENST00000515516 SERTM1A2A2V5 107 aa12.51□□□□□ -0.41
TCOF1-215ENST00000515516 SMIM23A6NLE4 172 aa12.51□□□□□ -0.41
TCOF1-215ENST00000515516 HSPB2A8KAH6 182 aa12.51□□□□□ -0.41
TCOF1-215ENST00000515516 GNB5O14775 395 aa12.51□□□□□ -0.41
TCOF1-215ENST00000515516 CBX7O95931 251 aa12.51□□□□□ -0.41
TCOF1-215ENST00000515516 HPNP05981 417 aa12.51□□□□□ -0.41
TCOF1-215ENST00000515516 MSX1P28360 303 aa12.51□□□□□ -0.41
TCOF1-215ENST00000515516 SLCO1A2P46721 670 aa12.51□□□□□ -0.41
TCOF1-215ENST00000515516 HTR6P50406 440 aa12.51□□□□□ -0.41
TCOF1-215ENST00000515516 PSPHP78330 225 aa12.51□□□□□ -0.41
TCOF1-215ENST00000515516 RAE1P78406 368 aaKnown RBP12.51□□□□□ -0.41
TCOF1-215ENST00000515516 MRPS35P82673 323 aaKnown RBP12.51□□□□□ -0.41
TCOF1-215ENST00000515516 SNTA1Q13424 505 aa12.51□□□□□ -0.41
TCOF1-215ENST00000515516 LTB4RQ15722 352 aa12.51□□□□□ -0.41
TCOF1-215ENST00000515516 HSPB2Q16082 182 aa12.51□□□□□ -0.41
TCOF1-215ENST00000515516 SLC25A35Q3KQZ1 300 aa12.51□□□□□ -0.41
TCOF1-215ENST00000515516 TIGD3Q6B0B8 471 aa12.51□□□□□ -0.41
TCOF1-215ENST00000515516 ANGPTL8Q6UXH0 198 aa12.51□□□□□ -0.41
TCOF1-215ENST00000515516 WDR53Q7Z5U6 358 aaPredicted RBP12.51□□□□□ -0.41
TCOF1-215ENST00000515516 ULK2Q8IYT8 1036 aa12.51□□□□□ -0.41
TCOF1-215ENST00000515516 CDC26Q8NHZ8 85 aa12.51□□□□□ -0.41
TCOF1-215ENST00000515516 ZNF675Q8TD23 568 aa12.51□□□□□ -0.41
TCOF1-215ENST00000515516 MZB1Q8WU39 189 aa12.51□□□□□ -0.41
TCOF1-215ENST00000515516 CTHRC1Q96CG8 243 aa12.51□□□□□ -0.41
TCOF1-215ENST00000515516 TMCO6Q96DC7 493 aa12.51□□□□□ -0.41
TCOF1-215ENST00000515516 LRRC46Q96FV0 321 aa12.51□□□□□ -0.41
TCOF1-215ENST00000515516 KCNA7Q96RP8 456 aa12.51□□□□□ -0.41
TCOF1-215ENST00000515516 EBPLQ9BY08 206 aa12.51□□□□□ -0.41
TCOF1-215ENST00000515516 EPB41L4BQ9H329 900 aa12.51□□□□□ -0.41
TCOF1-215ENST00000515516 GSTO2Q9H4Y5 243 aa12.51□□□□□ -0.41
TCOF1-215ENST00000515516 MCCC2Q9HCC0 563 aa12.51□□□□□ -0.41
TCOF1-215ENST00000515516 SLC35C2Q9NQQ7 365 aa12.51□□□□□ -0.41
TCOF1-215ENST00000515516 Q9UFV3 132 aa12.51□□□□□ -0.41
TCOF1-215ENST00000515516 DTX4Q9Y2E6 619 aa12.51□□□□□ -0.41
TCOF1-215ENST00000515516 FRG2CA6NGY1 282 aa12.5□□□□□ -0.41
TCOF1-215ENST00000515516 G3V2L1 256 aa12.5□□□□□ -0.41
TCOF1-215ENST00000515516 COPEO14579 308 aa12.5□□□□□ -0.41
TCOF1-215ENST00000515516 REM1O75628 298 aa12.5□□□□□ -0.41
TCOF1-215ENST00000515516 PROCP04070 461 aa12.5□□□□□ -0.41
TCOF1-215ENST00000515516 CRHR1P34998 444 aa12.5□□□□□ -0.41
TCOF1-215ENST00000515516 EMDP50402 254 aa12.5□□□□□ -0.41
TCOF1-215ENST00000515516 NAGLUP54802 743 aa12.5□□□□□ -0.41
TCOF1-215ENST00000515516 DNAJB13P59910 316 aa12.5□□□□□ -0.41
TCOF1-215ENST00000515516 DUSP2Q05923 314 aa12.5□□□□□ -0.41
TCOF1-215ENST00000515516 TFF3Q07654 80 aa12.5□□□□□ -0.41
TCOF1-215ENST00000515516 C2orf80Q0P641 193 aa12.5□□□□□ -0.41
TCOF1-215ENST00000515516 ZNF628Q5EBL2 1059 aa12.5□□□□□ -0.41
TCOF1-215ENST00000515516 CES4AQ5XG92 561 aa12.5□□□□□ -0.41
TCOF1-215ENST00000515516 FAM219BQ5XKK7 198 aa12.5□□□□□ -0.41
TCOF1-215ENST00000515516 GALNT18Q6P9A2 607 aa12.5□□□□□ -0.41
TCOF1-215ENST00000515516 DMRTC2Q8IXT2 367 aaPredicted RBP12.5□□□□□ -0.41
TCOF1-215ENST00000515516 FAM9CQ8IZT9 166 aa12.5□□□□□ -0.41
TCOF1-215ENST00000515516 ACBD4Q8NC06 268 aa12.5□□□□□ -0.41
TCOF1-215ENST00000515516 OR9A2Q8NGT5 310 aa12.5□□□□□ -0.41
TCOF1-215ENST00000515516 RDH11Q8TC12 318 aa12.5□□□□□ -0.41
TCOF1-215ENST00000515516 KAT2AQ92830 837 aa12.5□□□□□ -0.41
TCOF1-215ENST00000515516 COL21A1Q96P44 957 aa12.5□□□□□ -0.41
TCOF1-215ENST00000515516 TIMP4Q99727 224 aa12.5□□□□□ -0.41
TCOF1-215ENST00000515516 TREX2Q9BQ50 279 aaPredicted RBP12.5□□□□□ -0.41
TCOF1-215ENST00000515516 ZNF559Q9BR84 538 aa12.5□□□□□ -0.41
TCOF1-215ENST00000515516 OSBPL11Q9BXB4 747 aa12.5□□□□□ -0.41
TCOF1-215ENST00000515516 MIEF1Q9NQG6 463 aa12.5□□□□□ -0.41
TCOF1-215ENST00000515516 RRAGDQ9NQL2 400 aaPredicted RBP12.5□□□□□ -0.41
TCOF1-215ENST00000515516 NPDC1Q9NQX5 325 aaPredicted RBP12.5□□□□□ -0.41
TCOF1-215ENST00000515516 EHD3Q9NZN3 535 aa12.5□□□□□ -0.41
TCOF1-215ENST00000515516 MID2Q9UJV3 735 aa12.5□□□□□ -0.41
TCOF1-215ENST00000515516 ITGB1BP2Q9UKP3 347 aa12.5□□□□□ -0.41
TCOF1-215ENST00000515516 EMCNQ9ULC0 261 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms