RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 EBAG9O00559 213 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 CDK2AP1O14519 115 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 ASNA1O43681 348 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 ATP5HO75947 161 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 UBOX5O94941 541 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 CBX6O95503 412 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 ANP32DO95626 131 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 SERPINA7P05543 415 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 KRT16P08779 473 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 BMP2P12643 396 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 CLCN2P51788 898 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 PGDP52209 483 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 MVDP53602 400 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 RRADP55042 308 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 DCAF7P61962 342 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 TLE3Q04726 772 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 AIMP2Q13155 320 aaKnown RBP11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 DUSP8Q13202 625 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 SRSF6Q13247 344 aaKnown RBP11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 ATP1A4Q13733 1029 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 NFYCQ13952 458 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 RUNDC3AQ59EK9 446 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 MFSD12Q6NUT3 480 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 RNF111Q6ZNA4 994 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 LRRC69Q6ZNQ3 347 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 ZNF621Q6ZSS3 439 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 ARPINQ7Z6K5 226 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 LGI4Q8N135 537 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 CDRT4Q8N9R6 151 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 NUP43Q8NFH3 380 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 OR52R1Q8NGF1 315 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 OR8J3Q8NGG0 315 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 NUBPLQ8TB37 319 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 NCLNQ969V3 563 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 VSTM2LQ96N03 204 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 BTBD9Q96Q07 612 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 UBL7Q96S82 380 aaPredicted RBP11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 NPAS2Q99743 824 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 SH3GL1Q99961 368 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 SLC35A5Q9BS91 424 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 LMF2Q9BU23 707 aaKnown RBP11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 CNPPD1Q9BV87 410 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 OR8D2Q9GZM6 311 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 RAD21L1Q9H4I0 556 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 TPT1P8Q9HAU6 139 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 ZCCHC3Q9NUD5 404 aaKnown RBP11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 SLAMF8Q9P0V8 285 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 ZNF223Q9UK11 482 aaPredicted RBP11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 POLHQ9Y253 713 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 AP3M1Q9Y2T2 418 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 RAXQ9Y2V3 346 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 HEMK1Q9Y5R4 338 aaPredicted RBP11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 SNX8Q9Y5X2 465 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 MED13Q9UHV7 2174 aa11.13□□□□□ -0.63
PDLIM5-220ENST00000514830 CDC14CA4D256 554 aa11.12□□□□□ -0.63
PDLIM5-220ENST00000514830 AIM2O14862 343 aa11.12□□□□□ -0.63
PDLIM5-220ENST00000514830 NKX2-8O15522 239 aa11.12□□□□□ -0.63
PDLIM5-220ENST00000514830 UNC5CO95185 931 aa11.12□□□□□ -0.63
PDLIM5-220ENST00000514830 HMGN2P05204 90 aaKnown RBP11.12□□□□□ -0.63
PDLIM5-220ENST00000514830 GSNP06396 782 aa11.12□□□□□ -0.63
PDLIM5-220ENST00000514830 GPX2P18283 190 aa11.12□□□□□ -0.63
PDLIM5-220ENST00000514830 DRD5P21918 477 aa11.12□□□□□ -0.63
PDLIM5-220ENST00000514830 SSTR4P31391 388 aa11.12□□□□□ -0.63
PDLIM5-220ENST00000514830 CPOXP36551 454 aa11.12□□□□□ -0.63
PDLIM5-220ENST00000514830 PPICP45877 212 aa11.12□□□□□ -0.63
PDLIM5-220ENST00000514830 MAN2A2P49641 1150 aa11.12□□□□□ -0.63
PDLIM5-220ENST00000514830 PRIM2P49643 509 aa11.12□□□□□ -0.63
PDLIM5-220ENST00000514830 ANXA11P50995 505 aaKnown RBP11.12□□□□□ -0.63
PDLIM5-220ENST00000514830 FADDQ13158 208 aa11.12□□□□□ -0.63
PDLIM5-220ENST00000514830 ART3Q13508 389 aa11.12□□□□□ -0.63
PDLIM5-220ENST00000514830 EXOSC7Q15024 291 aaKnown RBP11.12□□□□□ -0.63
PDLIM5-220ENST00000514830 BTBD16Q32M84 506 aa11.12□□□□□ -0.63
PDLIM5-220ENST00000514830 SPDYE7PQ495Y7 208 aa11.12□□□□□ -0.63
PDLIM5-220ENST00000514830 SPATS1Q496A3 300 aa11.12□□□□□ -0.63
PDLIM5-220ENST00000514830 BROXQ5VW32 411 aa11.12□□□□□ -0.63
PDLIM5-220ENST00000514830 AP1ARQ63HQ0 302 aa11.12□□□□□ -0.63
PDLIM5-220ENST00000514830 HSDL2Q6YN16 418 aa11.12□□□□□ -0.63
PDLIM5-220ENST00000514830 C6orf120Q7Z4R8 191 aa11.12□□□□□ -0.63
PDLIM5-220ENST00000514830 APLFQ8IW19 511 aaPredicted RBP11.12□□□□□ -0.63
PDLIM5-220ENST00000514830 KBTBD2Q8IY47 623 aa11.12□□□□□ -0.63
PDLIM5-220ENST00000514830 ZNF441Q8N8Z8 693 aa11.12□□□□□ -0.63
PDLIM5-220ENST00000514830 OR52N2Q8NGI0 321 aa11.12□□□□□ -0.63
PDLIM5-220ENST00000514830 OR5L2Q8NGL0 311 aa11.12□□□□□ -0.63
PDLIM5-220ENST00000514830 C16orf52Q8NHV5 167 aa11.12□□□□□ -0.63
PDLIM5-220ENST00000514830 ADIPOR1Q96A54 375 aa11.12□□□□□ -0.63
PDLIM5-220ENST00000514830 TP53INP1Q96A56 240 aa11.12□□□□□ -0.63
PDLIM5-220ENST00000514830 NAF1Q96HR8 494 aaKnown RBP11.12□□□□□ -0.63
PDLIM5-220ENST00000514830 STACQ99469 402 aa11.12□□□□□ -0.63
PDLIM5-220ENST00000514830 CPPED1Q9BRF8 314 aaPredicted RBP11.12□□□□□ -0.63
PDLIM5-220ENST00000514830 ACTRT3Q9BYD9 372 aa11.12□□□□□ -0.63
PDLIM5-220ENST00000514830 ZNF160Q9HCG1 818 aa11.12□□□□□ -0.63
PDLIM5-220ENST00000514830 ATP13A2Q9NQ11 1180 aa11.12□□□□□ -0.63
PDLIM5-220ENST00000514830 DUSP22Q9NRW4 184 aa11.12□□□□□ -0.63
PDLIM5-220ENST00000514830 THUMPD1Q9NXG2 353 aaKnown RBP11.12□□□□□ -0.63
PDLIM5-220ENST00000514830 GPR55Q9Y2T6 319 aaPredicted RBP11.12□□□□□ -0.63
PDLIM5-220ENST00000514830 GCN1Q92616 2671 aaKnown RBP11.12□□□□□ -0.63
PDLIM5-220ENST00000514830 NBEAQ8NFP9 2946 aa11.12□□□□□ -0.63
PDLIM5-220ENST00000514830 IGSF10Q6WRI0 2623 aa11.11□□□□□ -0.63
PDLIM5-220ENST00000514830 PTPRQQ9UMZ3 2332 aa11.11□□□□□ -0.63
PDLIM5-220ENST00000514830 DUXAA6NLW8 204 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms