RNA–Protein interactions for RNA: ENST00000514705.5

TSPAN17-208, Transcript of tetraspanin 17, humanhuman

TSL 2

Gene TSPAN17, Length 4,445 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-208ENST00000514705 MCCC1Q96RQ3 725 aaPredicted RBP13.15□□□□□ -0.3
TSPAN17-208ENST00000514705 BTBD1Q9H0C5 482 aa13.15□□□□□ -0.3
TSPAN17-208ENST00000514705 CWH43Q9H720 699 aa13.15□□□□□ -0.3
TSPAN17-208ENST00000514705 MRPL15Q9P015 296 aaKnown RBP13.15□□□□□ -0.3
TSPAN17-208ENST00000514705 LCTP09848 1927 aa13.15□□□□□ -0.31
TSPAN17-208ENST00000514705 RPN2P04844 631 aa13.14□□□□□ -0.31
TSPAN17-208ENST00000514705 PRKACBP22694 351 aa13.14□□□□□ -0.31
TSPAN17-208ENST00000514705 ELAVL4P26378 380 aaKnown RBP13.14□□□□□ -0.31
TSPAN17-208ENST00000514705 NLRP8Q86W28 1048 aa13.14□□□□□ -0.31
TSPAN17-208ENST00000514705 SLC25A46Q96AG3 418 aa13.14□□□□□ -0.31
TSPAN17-208ENST00000514705 CXorf40BQ96DE9 158 aa13.14□□□□□ -0.31
TSPAN17-208ENST00000514705 SIPA1Q96FS4 1042 aa13.14□□□□□ -0.31
TSPAN17-208ENST00000514705 NARS2Q96I59 477 aaKnown RBP13.14□□□□□ -0.31
TSPAN17-208ENST00000514705 QRSL1Q9H0R6 528 aaKnown RBP13.14□□□□□ -0.31
TSPAN17-208ENST00000514705 THSD1Q9NS62 852 aa13.14□□□□□ -0.31
TSPAN17-208ENST00000514705 SPATA6Q9NWH7 488 aaPredicted RBP13.14□□□□□ -0.31
TSPAN17-208ENST00000514705 CCDC88CQ9P219 2028 aa13.14□□□□□ -0.31
TSPAN17-208ENST00000514705 GAPDHSO14556 408 aaPredicted RBP13.14□□□□□ -0.31
TSPAN17-208ENST00000514705 ACVR1BP36896 505 aa13.14□□□□□ -0.31
TSPAN17-208ENST00000514705 KHKP50053 298 aa13.14□□□□□ -0.31
TSPAN17-208ENST00000514705 GPLD1P80108 840 aa13.14□□□□□ -0.31
TSPAN17-208ENST00000514705 FAM46CQ5VWP2 391 aa13.14□□□□□ -0.31
TSPAN17-208ENST00000514705 C10orf53Q8N6V4 93 aa13.14□□□□□ -0.31
TSPAN17-208ENST00000514705 NANOGP1Q8N7R0 232 aa13.14□□□□□ -0.31
TSPAN17-208ENST00000514705 RASGEF1AQ8N9B8 481 aa13.14□□□□□ -0.31
TSPAN17-208ENST00000514705 CHTF18Q8WVB6 975 aa13.14□□□□□ -0.31
TSPAN17-208ENST00000514705 TM9SF4Q92544 642 aa13.14□□□□□ -0.31
TSPAN17-208ENST00000514705 RC3H2Q9HBD1 1191 aaKnown RBP13.14□□□□□ -0.31
TSPAN17-208ENST00000514705 NEUROG3Q9Y4Z2 214 aa13.14□□□□□ -0.31
TSPAN17-208ENST00000514705 PIKFYVEQ9Y2I7 2098 aa13.14□□□□□ -0.31
TSPAN17-208ENST00000514705 LEFTY2O00292 366 aa13.14□□□□□ -0.31
TSPAN17-208ENST00000514705 ALPPP05187 535 aa13.14□□□□□ -0.31
TSPAN17-208ENST00000514705 ARSBP15848 533 aa13.14□□□□□ -0.31
TSPAN17-208ENST00000514705 SLCO4C1Q6ZQN7 724 aa13.14□□□□□ -0.31
TSPAN17-208ENST00000514705 DOK4Q8TEW6 326 aa13.14□□□□□ -0.31
TSPAN17-208ENST00000514705 RIPOR3Q96MK2 946 aa13.14□□□□□ -0.31
TSPAN17-208ENST00000514705 SAP130Q9H0E3 1048 aa13.14□□□□□ -0.31
TSPAN17-208ENST00000514705 C12orf4Q9NQ89 552 aa13.14□□□□□ -0.31
TSPAN17-208ENST00000514705 C1GALT1Q9NS00 363 aa13.14□□□□□ -0.31
TSPAN17-208ENST00000514705 GTF2A1LQ9UNN4 478 aa13.14□□□□□ -0.31
TSPAN17-208ENST00000514705 FABP7O15540 132 aa13.14□□□□□ -0.31
TSPAN17-208ENST00000514705 MAPK9P45984 424 aa13.14□□□□□ -0.31
TSPAN17-208ENST00000514705 RAB30Q15771 203 aa13.14□□□□□ -0.31
TSPAN17-208ENST00000514705 NLGN4YQ8NFZ3 816 aaPredicted RBP13.14□□□□□ -0.31
TSPAN17-208ENST00000514705 IFT27Q9BW83 186 aa13.14□□□□□ -0.31
TSPAN17-208ENST00000514705 TMPRSS11EQ9UL52 423 aa13.14□□□□□ -0.31
TSPAN17-208ENST00000514705 TRBV5-4A0A0C4DH59 114 aa13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 FAM86C2PA6NEL3 165 aa13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 MID1O15344 667 aa13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 SCN2BO60939 215 aa13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 FCER2P06734 321 aa13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 GNSP15586 552 aa13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 HMGA1P17096 107 aaKnown RBP13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 CBLP22681 906 aa13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 RASSF6Q6ZTQ3 369 aa13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 RD3Q7Z3Z2 195 aa13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 WDR20Q8TBZ3 569 aa13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 CREB3L4Q8TEY5 395 aa13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 TREX2Q9BQ50 279 aaPredicted RBP13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 CLSTN3Q9BQT9 956 aa13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 BRD7Q9NPI1 651 aa13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 PHF11Q9UIL8 331 aa13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 PARP14Q460N5 1801 aa13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 RGS13O14921 159 aa13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 PRODHO43272 600 aa13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 ERI3O43414 337 aaKnown RBP13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 REM1O75628 298 aa13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 HBQ1P09105 142 aa13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 ACADMP11310 421 aa13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 ANXA3P12429 323 aa13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 TYRP14679 529 aa13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 DNASE1P24855 282 aa13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 HLA-FP30511 346 aa13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 ETV6P41212 452 aa13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 ASAH1Q13510 395 aa13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 P2RY14Q15391 338 aa13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 SEC23BQ15437 767 aa13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 LINGO2Q7L985 606 aa13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 PGBD3Q8N328 593 aa13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 ING5Q8WYH8 240 aa13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 RGMAQ96B86 450 aa13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 BARHL1Q9BZE3 327 aa13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 KLHL42Q9P2K6 505 aa13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 ZNF780BQ9Y6R6 833 aa13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 MN1Q10571 1320 aaPredicted RBP13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 KCNE1BA0A087WTH5 132 aa13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 CHURC1-FNTBB4DL54 471 aa13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 GFYI3L273 518 aa13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 MLLT3P42568 568 aaPredicted RBP13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 ACSM5Q6NUN0 579 aa13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 TRAM1L1Q8N609 369 aa13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 FIBINQ8TAL6 211 aa13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 SPRYD4Q8WW59 207 aaPredicted RBP13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 ZNF354BQ96LW1 612 aa13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 OR4K3Q96R72 315 aa13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 MACROD1Q9BQ69 325 aa13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 TMEM138Q9NPI0 162 aa13.13□□□□□ -0.31
TSPAN17-208ENST00000514705 IFNA7P01567 189 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 KELP23276 732 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 RFX2P48378 723 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms