RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 ADNPQ9H2P0 1102 aa14□□□□□ -0.17
VCAN-211ENST00000513984 ERVMER34-1Q9H9K5 563 aa14□□□□□ -0.17
VCAN-211ENST00000513984 SDK1Q7Z5N4 2213 aa14□□□□□ -0.17
VCAN-211ENST00000513984 CABIN1Q9Y6J0 2220 aa14□□□□□ -0.17
VCAN-211ENST00000513984 CCDC163A0A0D9SF12 145 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 RHPN2P1A8MT19 583 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 FAM227AF5H4B4 570 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 SLC1A7O00341 560 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 SYT5O00445 386 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 PLOD3O60568 738 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 LGI1O95970 557 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 AGXTP21549 392 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 CBLP22681 906 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 NUP107P57740 925 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 RPP38P78345 283 aaKnown RBP13.99□□□□□ -0.17
VCAN-211ENST00000513984 ID2Q02363 134 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 NDUFA9Q16795 377 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 ZNF770Q6IQ21 691 aaPredicted RBP13.99□□□□□ -0.17
VCAN-211ENST00000513984 C16orf62Q7Z3J2 963 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 TAGAPQ8N103 731 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 SLC16A11Q8NCK7 471 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 OR9Q2Q8NGE9 314 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 VANGL1Q8TAA9 524 aaPredicted RBP13.99□□□□□ -0.17
VCAN-211ENST00000513984 TMIGD2Q96BF3 282 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 ANKRD9Q96BM1 317 aaPredicted RBP13.99□□□□□ -0.17
VCAN-211ENST00000513984 TSC22D3Q99576 134 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 NIPSNAP1Q9BPW8 284 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 WFDC6Q9BQY6 131 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 NMNAT1Q9HAN9 279 aaPredicted RBP13.99□□□□□ -0.17
VCAN-211ENST00000513984 RHCGQ9UBD6 479 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 PLCL2Q9UPR0 1127 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 SLC9A8Q9Y2E8 581 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 CEPT1Q9Y6K0 416 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 CSNK1G3Q9Y6M4 447 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 RNF215Q9Y6U7 377 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 ADAMTS20P59510 1910 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 UNC13CQ8NB66 2214 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 CHST10O43529 356 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 FOXS1O43638 330 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 MED26O95402 600 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 CPNE6O95741 557 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 PAX7P23759 505 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 MLLT3P42568 568 aaPredicted RBP13.99□□□□□ -0.17
VCAN-211ENST00000513984 MAPK10P53779 464 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 MLLT1Q03111 559 aaPredicted RBP13.99□□□□□ -0.17
VCAN-211ENST00000513984 CHRNEQ04844 493 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 COL9A2Q14055 689 aaPredicted RBP13.99□□□□□ -0.17
VCAN-211ENST00000513984 FAM53BQ14153 422 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 PRICKLE4Q2TBC4 344 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 TRMT12Q53H54 448 aaKnown RBP13.99□□□□□ -0.17
VCAN-211ENST00000513984 GARNL3Q5VVW2 1013 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 BROXQ5VW32 411 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 DEF8Q6ZN54 512 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 RBM45Q8IUH3 476 aaKnown RBP13.99□□□□□ -0.17
VCAN-211ENST00000513984 CCDC71Q8IV32 467 aaPredicted RBP13.99□□□□□ -0.17
VCAN-211ENST00000513984 PARP8Q8N3A8 854 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 SIMC1Q8NDZ2 872 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 CNIH3Q8TBE1 160 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 ZDHHC12Q96GR4 267 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 TGM7Q96PF1 710 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 MAT2BQ9NZL9 334 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 A4GNTQ9UNA3 340 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 CLCA2Q9UQC9 943 aa13.99□□□□□ -0.17
VCAN-211ENST00000513984 ASXL3Q9C0F0 2248 aa13.98□□□□□ -0.17
VCAN-211ENST00000513984 A0A0A6YYC8 382 aaPredicted RBP13.98□□□□□ -0.17
VCAN-211ENST00000513984 IGHV5-51A0A0C4DH38 117 aa13.98□□□□□ -0.17
VCAN-211ENST00000513984 A0A1B0GVT2 93 aa13.98□□□□□ -0.17
VCAN-211ENST00000513984 I3L1I5 382 aaPredicted RBP13.98□□□□□ -0.17
VCAN-211ENST00000513984 M0R3H8 397 aa13.98□□□□□ -0.17
VCAN-211ENST00000513984 NUDT21O43809 227 aaKnown RBP13.98□□□□□ -0.17
VCAN-211ENST00000513984 ABCB7O75027 752 aa13.98□□□□□ -0.17
VCAN-211ENST00000513984 NME6O75414 186 aaPredicted RBP13.98□□□□□ -0.17
VCAN-211ENST00000513984 ZIC2O95409 532 aaPredicted RBP13.98□□□□□ -0.17
VCAN-211ENST00000513984 OXSR1O95747 527 aaPredicted RBP13.98□□□□□ -0.17
VCAN-211ENST00000513984 ANGPTL1O95841 491 aa13.98□□□□□ -0.17
VCAN-211ENST00000513984 ALPPP05187 535 aa13.98□□□□□ -0.17
VCAN-211ENST00000513984 H1F0P07305 194 aaKnown RBP13.98□□□□□ -0.17
VCAN-211ENST00000513984 ACP2P11117 423 aa13.98□□□□□ -0.17
VCAN-211ENST00000513984 EEF1B2P24534 225 aaKnown RBP13.98□□□□□ -0.17
VCAN-211ENST00000513984 ELAVL4P26378 380 aaKnown RBP13.98□□□□□ -0.17
VCAN-211ENST00000513984 CTSKP43235 329 aa13.98□□□□□ -0.17
VCAN-211ENST00000513984 SMIM11AP58511 58 aa13.98□□□□□ -0.17
VCAN-211ENST00000513984 CXCR4P61073 352 aa13.98□□□□□ -0.17
VCAN-211ENST00000513984 ESRRGP62508 458 aa13.98□□□□□ -0.17
VCAN-211ENST00000513984 MGAT2Q10469 447 aa13.98□□□□□ -0.17
VCAN-211ENST00000513984 MAD2L1BPQ15013 274 aaPredicted RBP13.98□□□□□ -0.17
VCAN-211ENST00000513984 INAVAQ3KP66 663 aa13.98□□□□□ -0.17
VCAN-211ENST00000513984 ARHGAP11BQ3KRB8 267 aa13.98□□□□□ -0.17
VCAN-211ENST00000513984 WDR53Q7Z5U6 358 aaPredicted RBP13.98□□□□□ -0.17
VCAN-211ENST00000513984 ADAMTS18Q8TE60 1221 aa13.98□□□□□ -0.17
VCAN-211ENST00000513984 CDS1Q92903 461 aa13.98□□□□□ -0.17
VCAN-211ENST00000513984 CTHRC1Q96CG8 243 aa13.98□□□□□ -0.17
VCAN-211ENST00000513984 FUZQ9BT04 418 aa13.98□□□□□ -0.17
VCAN-211ENST00000513984 ZNF556Q9HAH1 456 aa13.98□□□□□ -0.17
VCAN-211ENST00000513984 LRIT1Q9P2V4 623 aa13.98□□□□□ -0.17
VCAN-211ENST00000513984 ENOPH1Q9UHY7 261 aa13.98□□□□□ -0.17
VCAN-211ENST00000513984 MUTYHQ9UIF7 546 aa13.98□□□□□ -0.17
VCAN-211ENST00000513984 PCDHGA6Q9Y5G7 932 aa13.98□□□□□ -0.17
VCAN-211ENST00000513984 RP1P56715 2156 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 TRBV4-1A0A0J9YWV2 114 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms