RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 TRIM4Q9C037 500 aa9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 NSRP1Q9H0G5 558 aaKnown RBP9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 CCDC167Q9P0B6 97 aa9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 ZNF639Q9UID6 485 aa9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 ERVK-11Q9UQG0 969 aa9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 PCDHGA9Q9Y5G4 932 aaKnown RBP9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 KALRNO60229 2985 aa9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 RNF103-CHMP3A0A140T963 221 aa9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 C2orf92A0A1B0GVN3 265 aa9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 ASPDHA6ND91 283 aa9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 SCN2BO60939 215 aa9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 NADKO95544 446 aaPredicted RBP9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 PRB1P04280 392 aa9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 ALPPP05187 535 aa9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 GSNP06396 782 aa9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 PGRP06401 933 aa9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 CAPN3P20807 821 aa9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 DNAJA1P31689 397 aaKnown RBP9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 SOX3P41225 446 aa9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 EMDP50402 254 aa9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 POLR2JP52435 117 aaKnown RBP9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 MLF1P58340 268 aa9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 RPS26P62854 115 aaKnown RBP9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 ARG2P78540 354 aa9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 OC90Q02509 493 aaPredicted RBP9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 SRSF11Q05519 484 aaKnown RBP9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 BIKQ13323 160 aa9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 MEP1AQ16819 746 aa9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 SPDYE7PQ495Y7 208 aa9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 GTDC1Q4AE62 458 aa9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 NADK2Q4G0N4 442 aa9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 DESI1Q6ICB0 168 aa9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 H3F3CQ6NXT2 135 aa9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 SLC2A7Q6PXP3 512 aa9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 CPLX4Q7Z7G2 160 aa9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 RBMXL3Q8N7X1 1067 aaKnown RBP9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 CATSPER1Q8NEC5 780 aa9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 OR7G1Q8NGA0 311 aa9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 OR8J2Q8NGG1 315 aa9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 STON2Q8WXE9 905 aa9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 OR5P2Q8WZ92 322 aa9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 FAM120BQ96EK7 910 aaKnown RBP9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 C16orf58Q96GQ5 468 aa9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 ZNF354BQ96LW1 612 aa9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 SIGLEC12Q96PQ1 595 aa9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 OR52E6Q96RD3 313 aa9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 RASL10BQ96S79 203 aa9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 UBL7Q96S82 380 aaPredicted RBP9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 YIPF4Q9BSR8 244 aa9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 HES7Q9BYE0 225 aa9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 NMUR2Q9GZQ4 415 aa9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 NXF5Q9H1B4 397 aaKnown RBP9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 EPS8L2Q9H6S3 715 aa9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 FOLH1BQ9HBA9 442 aa9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 ACSS1Q9NUB1 689 aaPredicted RBP9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 ZCCHC3Q9NUD5 404 aaKnown RBP9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 ARMCX1Q9P291 453 aa9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 MYOTQ9UBF9 498 aa9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 HEMK1Q9Y5R4 338 aaPredicted RBP9.07□□□□□ -0.96
TOPBP1-209ENST00000513818 EXPH5Q8NEV8 1989 aa9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 SMG1Q96Q15 3661 aaKnown RBP9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 FAM234BA2RU67 622 aa9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 OR6C76A6NM76 312 aa9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 G3V3Y1 287 aa9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 PLOD2O00469 737 aa9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 RNASET2O00584 256 aaKnown RBP9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 SNX3O60493 162 aa9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 PLOD3O60568 738 aa9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 COQ9O75208 318 aa9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 OR6B1O95007 311 aa9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 PSMG1O95456 288 aa9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 ACP2P11117 423 aa9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 DDX5P17844 614 aaKnown RBP9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 ATP4BP51164 291 aa9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 KCNK10P57789 538 aa9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 AP2B1P63010 937 aa9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 NFATC3Q12968 1075 aa9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 TP53BP2Q13625 1128 aa9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 TUBA3CQ13748 450 aa9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 RCAN2Q14206 197 aa9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 LASP1Q14847 261 aaKnown RBP9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 MLC1Q15049 377 aa9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 VPS26BQ4G0F5 336 aa9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 HLA-DQA1Q5Y7H0 255 aa9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 TUBA3EQ6PEY2 450 aa9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 GALNT10Q86SR1 603 aa9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 OR2L13Q8N349 312 aa9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 ZNF441Q8N8Z8 693 aa9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 C7orf57Q8NEG2 295 aa9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 NUP43Q8NFH3 380 aa9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 OR4N2Q8NGD1 307 aa9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 OR5M3Q8NGP4 307 aa9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 NUBPLQ8TB37 319 aa9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 PNPT1Q8TCS8 783 aaKnown RBP9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 JADE3Q92613 823 aa9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 ADIPOR1Q96A54 375 aa9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 SPDL1Q96EA4 605 aa9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 GIMAP5Q96F15 307 aa9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 VSTM2LQ96N03 204 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms