RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107		A0A1W2PP18	115 aa		13.47	□□□□□ -0.25
MATR3-238	ENST00000512107	GXYLT2	A0PJZ3	443 aa		13.47	□□□□□ -0.25
MATR3-238	ENST00000512107	FXYD1	O00168	92 aa		13.47	□□□□□ -0.25
MATR3-238	ENST00000512107	WWP2	O00308	870 aa		13.47	□□□□□ -0.25
MATR3-238	ENST00000512107	NDUFAB1	O14561	156 aa		13.47	□□□□□ -0.25
MATR3-238	ENST00000512107	EMC8	O43402	210 aa		13.47	□□□□□ -0.25
MATR3-238	ENST00000512107	SNRPB2	P08579	225 aa	Known RBP	13.47	□□□□□ -0.25
MATR3-238	ENST00000512107	CD97	P48960	835 aa		13.47	□□□□□ -0.25
MATR3-238	ENST00000512107	CCT3	P49368	545 aa	Known RBP	13.47	□□□□□ -0.25
MATR3-238	ENST00000512107	MAN2A2	P49641	1150 aa		13.47	□□□□□ -0.25
MATR3-238	ENST00000512107	CLCN2	P51788	898 aa		13.47	□□□□□ -0.25
MATR3-238	ENST00000512107	KCNK10	P57789	538 aa		13.47	□□□□□ -0.25
MATR3-238	ENST00000512107	MLF1	P58340	268 aa		13.47	□□□□□ -0.25
MATR3-238	ENST00000512107	COX20	Q5RI15	118 aa		13.47	□□□□□ -0.25
MATR3-238	ENST00000512107	GKAP1	Q5VSY0	366 aa	Predicted RBP	13.47	□□□□□ -0.25
MATR3-238	ENST00000512107	ANXA8L1	Q5VT79	327 aa		13.47	□□□□□ -0.25
MATR3-238	ENST00000512107	REP15	Q6BDI9	236 aa		13.47	□□□□□ -0.25
MATR3-238	ENST00000512107	ZNF227	Q86WZ6	799 aa		13.47	□□□□□ -0.25
MATR3-238	ENST00000512107	SAMD14	Q8IZD0	417 aa	Predicted RBP	13.47	□□□□□ -0.25
MATR3-238	ENST00000512107	CCDC197	Q8NCU1	140 aa		13.47	□□□□□ -0.25
MATR3-238	ENST00000512107	OR7G1	Q8NGA0	311 aa		13.47	□□□□□ -0.25
MATR3-238	ENST00000512107	ZFP28	Q8NHY6	868 aa		13.47	□□□□□ -0.25
MATR3-238	ENST00000512107	FBXO27	Q8NI29	283 aa		13.47	□□□□□ -0.25
MATR3-238	ENST00000512107	LHPP	Q9H008	270 aa		13.47	□□□□□ -0.25
MATR3-238	ENST00000512107	EQTN	Q9NQ60	294 aa		13.47	□□□□□ -0.25
MATR3-238	ENST00000512107	ZCCHC3	Q9NUD5	404 aa	Known RBP	13.47	□□□□□ -0.25
MATR3-238	ENST00000512107	PLA2G3	Q9NZ20	509 aa		13.47	□□□□□ -0.25
MATR3-238	ENST00000512107	VAPA	Q9P0L0	249 aa		13.47	□□□□□ -0.25
MATR3-238	ENST00000512107	GMPR2	Q9P2T1	348 aa	Known RBP	13.47	□□□□□ -0.25
MATR3-238	ENST00000512107	MAPRE3	Q9UPY8	281 aa		13.47	□□□□□ -0.25
MATR3-238	ENST00000512107	PCDHB14	Q9Y5E9	798 aa		13.47	□□□□□ -0.25
MATR3-238	ENST00000512107	RNF103-CHMP3	A0A140T963	221 aa		13.46	□□□□□ -0.25
MATR3-238	ENST00000512107	PRAMEF27	A3QJZ7	478 aa		13.46	□□□□□ -0.25
MATR3-238	ENST00000512107	CCDC22	O60826	627 aa		13.46	□□□□□ -0.25
MATR3-238	ENST00000512107	UNC5C	O95185	931 aa		13.46	□□□□□ -0.25
MATR3-238	ENST00000512107	FAM87A	P0C7U9	286 aa		13.46	□□□□□ -0.25
MATR3-238	ENST00000512107	CT45A8	P0DMV1	189 aa		13.46	□□□□□ -0.25
MATR3-238	ENST00000512107	CT45A9	P0DMV2	189 aa		13.46	□□□□□ -0.25
MATR3-238	ENST00000512107	COX4I1	P13073	169 aa		13.46	□□□□□ -0.25
MATR3-238	ENST00000512107	SOAT1	P35610	550 aa		13.46	□□□□□ -0.25
MATR3-238	ENST00000512107	CPA2	P48052	419 aa		13.46	□□□□□ -0.25
MATR3-238	ENST00000512107	POLE2	P56282	527 aa		13.46	□□□□□ -0.25
MATR3-238	ENST00000512107	PSG6	Q00889	435 aa		13.46	□□□□□ -0.25
MATR3-238	ENST00000512107	MAPKAPK3	Q16644	382 aa		13.46	□□□□□ -0.25
MATR3-238	ENST00000512107	CT45A2	Q5DJT8	189 aa		13.46	□□□□□ -0.25
MATR3-238	ENST00000512107	LRIF1	Q5T3J3	769 aa		13.46	□□□□□ -0.25
MATR3-238	ENST00000512107	SAXO2	Q658L1	398 aa		13.46	□□□□□ -0.25
MATR3-238	ENST00000512107	MFSD12	Q6NUT3	480 aa		13.46	□□□□□ -0.25
MATR3-238	ENST00000512107	BORA	Q6PGQ7	559 aa		13.46	□□□□□ -0.25
MATR3-238	ENST00000512107	HSDL2	Q6YN16	418 aa		13.46	□□□□□ -0.25
MATR3-238	ENST00000512107	LINC00696	Q6ZRV3	163 aa		13.46	□□□□□ -0.25
MATR3-238	ENST00000512107	ZNF621	Q6ZSS3	439 aa		13.46	□□□□□ -0.25
MATR3-238	ENST00000512107	GPR155	Q7Z3F1	870 aa		13.46	□□□□□ -0.25
MATR3-238	ENST00000512107	C6orf120	Q7Z4R8	191 aa		13.46	□□□□□ -0.25
MATR3-238	ENST00000512107	PRR22	Q8IZ63	422 aa		13.46	□□□□□ -0.25
MATR3-238	ENST00000512107	BEST3	Q8N1M1	668 aa		13.46	□□□□□ -0.25
MATR3-238	ENST00000512107	ARMC10	Q8N2F6	343 aa		13.46	□□□□□ -0.25
MATR3-238	ENST00000512107	PNPT1	Q8TCS8	783 aa	Known RBP	13.46	□□□□□ -0.25
MATR3-238	ENST00000512107	ZFP90	Q8TF47	636 aa		13.46	□□□□□ -0.25
MATR3-238	ENST00000512107	APOBEC4	Q8WW27	367 aa	Known RBP	13.46	□□□□□ -0.25
MATR3-238	ENST00000512107	RCN3	Q96D15	328 aa		13.46	□□□□□ -0.25
MATR3-238	ENST00000512107	ERP27	Q96DN0	273 aa		13.46	□□□□□ -0.25
MATR3-238	ENST00000512107	SLC35A4	Q96G79	324 aa		13.46	□□□□□ -0.25
MATR3-238	ENST00000512107	PHF12	Q96QT6	1004 aa		13.46	□□□□□ -0.25
MATR3-238	ENST00000512107	PANX1	Q96RD7	426 aa		13.46	□□□□□ -0.25
MATR3-238	ENST00000512107	GAL3ST4	Q96RP7	486 aa		13.46	□□□□□ -0.25
MATR3-238	ENST00000512107	SLC39A3	Q9BRY0	314 aa		13.46	□□□□□ -0.25
MATR3-238	ENST00000512107	DEFB126	Q9BYW3	111 aa		13.46	□□□□□ -0.25
MATR3-238	ENST00000512107	IL1RL2	Q9HB29	575 aa		13.46	□□□□□ -0.25
MATR3-238	ENST00000512107	DDX18	Q9NVP1	670 aa	Known RBP	13.46	□□□□□ -0.25
MATR3-238	ENST00000512107	TMEM45A	Q9NWC5	275 aa		13.46	□□□□□ -0.25
MATR3-238	ENST00000512107	FBXO34	Q9NWN3	711 aa		13.46	□□□□□ -0.25
MATR3-238	ENST00000512107	ASH1L	Q9NR48	2969 aa	Known RBP	13.46	□□□□□ -0.26
MATR3-238	ENST00000512107	EML6	Q6ZMW3	1958 aa		13.45	□□□□□ -0.26
MATR3-238	ENST00000512107		A0A096LPI6	279 aa		13.45	□□□□□ -0.26
MATR3-238	ENST00000512107	RFXANK	O14593	260 aa		13.45	□□□□□ -0.26
MATR3-238	ENST00000512107	OR2J2	O76002	312 aa		13.45	□□□□□ -0.26
MATR3-238	ENST00000512107	ZFAND5	O76080	213 aa		13.45	□□□□□ -0.26
MATR3-238	ENST00000512107	IGKV1D-16	P01601	117 aa		13.45	□□□□□ -0.26
MATR3-238	ENST00000512107	HMGN2	P05204	90 aa	Known RBP	13.45	□□□□□ -0.26
MATR3-238	ENST00000512107	IFI6	P09912	130 aa		13.45	□□□□□ -0.26
MATR3-238	ENST00000512107	T-ENOL	P0DO92	83 aa		13.45	□□□□□ -0.26
MATR3-238	ENST00000512107	UQCRC2	P22695	453 aa		13.45	□□□□□ -0.26
MATR3-238	ENST00000512107	NR0B1	P51843	470 aa	Known RBP	13.45	□□□□□ -0.26
MATR3-238	ENST00000512107	RRAD	P55042	308 aa		13.45	□□□□□ -0.26
MATR3-238	ENST00000512107	IRX1	P78414	480 aa	Predicted RBP	13.45	□□□□□ -0.26
MATR3-238	ENST00000512107	TP53BP2	Q13625	1128 aa		13.45	□□□□□ -0.26
MATR3-238	ENST00000512107	CAPRIN1	Q14444	709 aa	Known RBP	13.45	□□□□□ -0.26
MATR3-238	ENST00000512107	LASP1	Q14847	261 aa	Known RBP	13.45	□□□□□ -0.26
MATR3-238	ENST00000512107	MYBPC3	Q14896	1274 aa		13.45	□□□□□ -0.26
MATR3-238	ENST00000512107	MAPK11	Q15759	364 aa		13.45	□□□□□ -0.26
MATR3-238	ENST00000512107	DUSP5	Q16690	384 aa		13.45	□□□□□ -0.26
MATR3-238	ENST00000512107	PIGG	Q5H8A4	983 aa		13.45	□□□□□ -0.26
MATR3-238	ENST00000512107	COLEC12	Q5KU26	742 aa		13.45	□□□□□ -0.26
MATR3-238	ENST00000512107	MSANTD1	Q6ZTZ1	278 aa		13.45	□□□□□ -0.26
MATR3-238	ENST00000512107	ZAR1	Q86SH2	424 aa		13.45	□□□□□ -0.26
MATR3-238	ENST00000512107	RPS19BP1	Q86WX3	136 aa	Known RBP	13.45	□□□□□ -0.26
MATR3-238	ENST00000512107	DPP10	Q8N608	796 aa		13.45	□□□□□ -0.26
MATR3-238	ENST00000512107	NATD1	Q8N6N6	113 aa		13.45	□□□□□ -0.26
MATR3-238	ENST00000512107	CLEC1A	Q8NC01	280 aa		13.45	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms