RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 SERPINB12Q96P63 405 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 QKIQ96PU8 341 aaKnown RBP eCLIP4.25□□□□□ -1.73
NIPBL-206ENST00000509429 PLEKHF1Q96S99 279 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 NPAS1Q99742 590 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 EBNA1BP2Q99848 306 aaKnown RBP4.25□□□□□ -1.73
NIPBL-206ENST00000509429 SOX7Q9BT81 388 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 TRMOQ9BU70 441 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 AMNQ9BXJ7 453 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 TM6SF2Q9BZW4 377 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 NMUR2Q9GZQ4 415 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 NAT10Q9H0A0 1025 aaKnown RBP4.25□□□□□ -1.73
NIPBL-206ENST00000509429 ENKD1Q9H0I2 346 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 SLITRK2Q9H156 845 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 HIPK2Q9H2X6 1198 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 WDR55Q9H6Y2 383 aaPredicted RBP4.25□□□□□ -1.73
NIPBL-206ENST00000509429 SIAEQ9HAT2 523 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 VAT1LQ9HCJ6 419 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 SACM1LQ9NTJ5 587 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 TEX10Q9NXF1 929 aaPredicted RBP4.25□□□□□ -1.73
NIPBL-206ENST00000509429 DPP3Q9NY33 737 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 TAS2R9Q9NYW1 312 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 KCND2Q9NZV8 630 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 VAPAQ9P0L0 249 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 ERRFI1Q9UJM3 462 aaPredicted RBP4.25□□□□□ -1.73
NIPBL-206ENST00000509429 GUCA1BQ9UMX6 200 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 NDRG2Q9UN36 371 aaKnown RBP4.25□□□□□ -1.73
NIPBL-206ENST00000509429 SLC22A13Q9Y226 551 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 UBE2J1Q9Y385 318 aaPredicted RBP4.25□□□□□ -1.73
NIPBL-206ENST00000509429 PKP3Q9Y446 797 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 RBM8AQ9Y5S9 174 aaKnown RBP4.25□□□□□ -1.73
NIPBL-206ENST00000509429 WIF1Q9Y5W5 379 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 CFAP20Q9Y6A4 193 aaKnown RBP4.25□□□□□ -1.73
NIPBL-206ENST00000509429 ARHGEF10O15013 1369 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 NID2Q14112 1375 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 ATP10DQ9P241 1426 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 MAP2P11137 1827 aaKnown RBP4.24□□□□□ -1.73
NIPBL-206ENST00000509429 LOC102723996A0A087X1L8 192 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 A0A1B0GW15 77 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 A0A1W2PPC1 479 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 ANKDD1BA6NHY2 528 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 SERPINE3A8MV23 424 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 MCIDASD6RGH6 385 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 LOC110117498-PIK3R3F6TDL0 507 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 TMEM189-UBE2V1I3L0A0 370 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 PEX12O00623 359 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 DNPH1O43598 174 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 DUX1O43812 170 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 SLC28A2O43868 658 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 PRKYO43930 277 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 PRKRAO75569 313 aaKnown RBP4.24□□□□□ -1.73
NIPBL-206ENST00000509429 NCR1O76036 304 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 B3GAT3O94766 335 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 SEC24AO95486 1093 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 ANGPTL1O95841 491 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 NDUFB10O96000 172 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 RAF1P04049 648 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 CDK1P06493 297 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 F7P08709 466 aaPredicted RBP4.24□□□□□ -1.73
NIPBL-206ENST00000509429 SMIM6P0DI80 62 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 PNMTP11086 282 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 MTHFD2P13995 350 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 EGR1P18146 543 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 TGM2P21980 687 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 DCKP27707 260 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 GTF2E2P29084 291 aaKnown RBP4.24□□□□□ -1.73
NIPBL-206ENST00000509429 HOXC9P31274 260 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 CCKARP32238 428 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 STX2P32856 288 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 CYLC1P35663 651 aaPredicted RBP4.24□□□□□ -1.73
NIPBL-206ENST00000509429 AHRP35869 848 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 ARL1P40616 181 aaPredicted RBP4.24□□□□□ -1.73
NIPBL-206ENST00000509429 PXNP49023 591 aaPredicted RBP4.24□□□□□ -1.73
NIPBL-206ENST00000509429 FLT3LGP49771 235 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 DGKQP52824 942 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 ATP5J2P56134 94 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 PROK1P58294 105 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 TIRAPP58753 221 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 MAGOHP61326 146 aaKnown RBP4.24□□□□□ -1.73
NIPBL-206ENST00000509429 MRPS9P82933 396 aaKnown RBP4.24□□□□□ -1.73
NIPBL-206ENST00000509429 GALK2Q01415 458 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 DEFA6Q01524 100 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 IRF8Q02556 426 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 MGAT3Q09327 533 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 PMPCAQ10713 525 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 HYAL1Q12794 435 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 PTPRCAPQ14761 206 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 CHI3L2Q15782 390 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 TPD52L1Q16890 204 aaPredicted RBP4.24□□□□□ -1.73
NIPBL-206ENST00000509429 IMPG1Q17R60 797 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 ASTE1Q2TB18 679 aaPredicted RBP4.24□□□□□ -1.73
NIPBL-206ENST00000509429 BEAN1Q3B7T3 259 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 ZSCAN23Q3MJ62 389 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 ATP13A5Q4VNC0 1218 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 LIN52Q52LA3 116 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 AKIRIN2Q53H80 203 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 CT83Q5H943 113 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 ZNF618Q5T7W0 954 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 RAET1LQ5VY80 246 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 KIAA0930Q6ICG6 404 aaPredicted RBP4.24□□□□□ -1.73
NIPBL-206ENST00000509429 EFCAB12Q6NXP0 572 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms