RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 ZNF709Q8N972 641 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 OR5W2Q8NH69 310 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 URM1Q9BTM9 101 aaKnown RBP6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 C20orf27Q9GZN8 174 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 PIGMQ9H3S5 423 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 APMAPQ9HDC9 416 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 ADAP2Q9NPF8 381 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 NIT2Q9NQR4 276 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 GGT3PA6NGU5 568 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 A6NL46 340 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 ARHGAP33O14559 1287 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 OR7A17O14581 309 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 TOR1AO14656 332 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 SHOXO15266 292 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 ADRB1P08588 477 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 RAB40ALP0C0E4 278 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 CTSEP14091 401 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 ZNF30P17039 623 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 AHCYP23526 432 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 CXCR1P25024 350 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 HSD11B1P28845 292 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 AQP2P41181 271 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 SOX2P48431 317 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 LSSP48449 732 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 ERVPABLB-1P60509 514 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 IRF5Q13568 498 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 ARL6IP1Q15041 203 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 ALG10Q5BKT4 473 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 ALKAL2Q6UX46 152 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 HFE2Q6ZVN8 426 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 LAX1Q8IWV1 398 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 GPR150Q8NGU9 434 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 PAQR8Q8TEZ7 354 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 RAB40AQ8WXH6 277 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 AUTS2Q8WXX7 1259 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 SMPDL3AQ92484 453 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 FUBP1Q96AE4 644 aaKnown RBP6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 AHCYL2Q96HN2 611 aaKnown RBP6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 OR14A2Q96R54 314 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 NKX6-2Q9C056 277 aaPredicted RBP6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 VAPAQ9P0L0 249 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 PCDHAC2Q9Y5I4 1007 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 MEGF11A6BM72 1044 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 PDHXO00330 501 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 P2RX6O15547 441 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 DPEP1P16444 411 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 RACK1P63244 317 aaKnown RBP6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 DUSP28Q4G0W2 176 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 CRTC1Q6UUV9 634 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 GDPD3Q7L5L3 318 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 ZNF550Q7Z398 422 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 C12orf40Q86WS4 652 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 CNTN4Q8IWV2 1026 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 OR5D16Q8NGK9 328 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 GPR152Q8TDT2 470 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 ARNTL2Q8WYA1 636 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 UPF1Q92900 1129 aaKnown RBP eCLIP6.97□□□□□ -1.299e-15■■□□□ 12.1
UBE2D3-224ENST00000508474 RAB8BQ92930 207 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 LRRC46Q96FV0 321 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 METTL2AQ96IZ6 378 aaKnown RBP6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 HRASLS5Q96KN8 279 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 PRRT1Q99946 306 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 ALG8Q9BVK2 526 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 ADARB2Q9NS39 739 aaKnown RBP6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 TMEM39AQ9NV64 488 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 TXNL4BQ9NX01 149 aaKnown RBP6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 SIX4Q9UIU6 781 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 TMPRSS11EQ9UL52 423 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 MYH3P11055 1940 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 IFT172Q9UG01 1749 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 A0A1B0GVT2 93 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 HYKKA2RU49 373 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 NPC1O15118 1278 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 BEST1O76090 585 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 RAB3DO95716 219 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 RAF1P04049 648 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 SNRNP70P08621 437 aaKnown RBP6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 PSMB1P20618 241 aaKnown RBP6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 FAM214AQ32MH5 1076 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 HBMQ6B0K9 141 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 SLC8B1Q6J4K2 584 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 PRSS55Q6UWB4 352 aaPredicted RBP6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 UMODL1-AS1Q8N2C9 162 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 SUMF2Q8NBJ7 301 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 ZNF419Q96HQ0 510 aaPredicted RBP6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 SPACA7Q96KW9 195 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 SUV39H2Q9H5I1 410 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 GAREM1Q9H706 876 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 C19orf12Q9NSK7 152 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 KIF25Q9UIL4 384 aa6.97□□□□□ -1.29
UBE2D3-224ENST00000508474 TBC1D3BA6NDS4 549 aa6.96□□□□□ -1.29
UBE2D3-224ENST00000508474 IMPA2O14732 288 aa6.96□□□□□ -1.29
UBE2D3-224ENST00000508474 ZNF254O75437 659 aa6.96□□□□□ -1.29
UBE2D3-224ENST00000508474 STBD1O95210 358 aa6.96□□□□□ -1.29
UBE2D3-224ENST00000508474 INHAP05111 366 aa6.96□□□□□ -1.29
UBE2D3-224ENST00000508474 MMP3P08254 477 aa6.96□□□□□ -1.29
UBE2D3-224ENST00000508474 ACP2P11117 423 aa6.96□□□□□ -1.29
UBE2D3-224ENST00000508474 AKR1C4P17516 323 aa6.96□□□□□ -1.29
UBE2D3-224ENST00000508474 HOXD11P31277 338 aaPredicted RBP6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms