RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 NKX6-3A6NJ46 265 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 ASB14A6NK59 587 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 CCDC169A6NNP5 214 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 K7EQM0 130 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 PDXKO00764 312 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 SH2D1BO14796 132 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 ARPC1BO15143 372 aaKnown RBP3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 TBX19O60806 448 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 APBB3O95704 486 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 IGHEP01854 428 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 ANXA4P09525 319 aaPredicted RBP3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 PBLDP30039 288 aaPredicted RBP3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 CHI3L1P36222 383 aaPredicted RBP3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 PTGFRP43088 359 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 OR3A2P47893 321 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 PGFP49763 221 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 SPIBQ01892 262 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 MSLNQ13421 630 aaPredicted RBP3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 MEF2DQ14814 521 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 EFTUD2Q15029 972 aaKnown RBP eCLIP3.44□□□□□ -1.861e-6■■■■■ 35.8
TRAPPC13-209ENST00000508304 PARP6Q2NL67 630 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 CCDC152Q4G0S7 254 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 RFTN2Q52LD8 501 aaPredicted RBP3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 ZNF311Q5JNZ3 666 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 PLPP4Q5VZY2 271 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 NCR3LG1Q68D85 454 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 ZNF343Q6P1L6 599 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 CES3Q6UWW8 571 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 ZNF730Q6ZMV8 503 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 KIF6Q6ZMV9 814 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 Q6ZRG5 221 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 GPRIN3Q6ZVF9 776 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 Q6ZVQ6 151 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 CENPUQ71F23 418 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 FAM131BQ86XD5 332 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 PYROXD2Q8N2H3 581 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 OR2T34Q8NGX1 318 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 RPLP0P6Q8NHW5 317 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 GOLGA5Q8TBA6 731 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 RDH11Q8TC12 318 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 PNPT1Q8TCS8 783 aaKnown RBP3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 GATAD1Q8WUU5 269 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 HPDLQ96IR7 371 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 ANKRD27Q96NW4 1050 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 AGAP4Q96P64 663 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 VPS35Q96QK1 796 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 ZNF607Q96SK3 696 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 RAB11FIP5Q9BXF6 653 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 TDRD1Q9BXT4 1180 aaKnown RBP3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 NLNQ9BYT8 704 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 THAP2Q9H0W7 228 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 B3GAT2Q9NPZ5 323 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 NDE1Q9NXR1 346 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 RDH8Q9NYR8 311 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 C6orf203Q9P0P8 240 aaPredicted RBP3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 P2RX2Q9UBL9 471 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 ZNF175Q9Y473 711 aa3.44□□□□□ -1.86
TRAPPC13-209ENST00000508304 NPC1L1Q9UHC9 1359 aa3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 IGHV3OR16-10A0A075B7F0 116 aa3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 SH3PXD2BA1X283 911 aa3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 MPTX1A8MV57 137 aa3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 WASH3PC4AMC7 463 aa3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 XPO1O14980 1071 aaKnown RBP3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 SIGLEC5O15389 551 aa3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 P2RX6O15547 441 aa3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 LANCL1O43813 399 aa3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 CSDE1O75534 798 aaKnown RBP3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 MBD3O95983 291 aa3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 RPLP0P05388 317 aaKnown RBP3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 IL4RP24394 825 aa3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 HTR2AP28223 471 aa3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 OTX2P32243 289 aa3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 ADRA1AP35348 466 aa3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 SLC1A6P48664 564 aa3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 OR1D5P58170 312 aa3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 RPS4XP62701 263 aaKnown RBP3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 RBBP4Q09028 425 aa3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 CALCOCO2Q13137 446 aa3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 CHIT1Q13231 466 aa3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 GPM6BQ13491 265 aa3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 GCKRQ14397 625 aa3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 P2RY14Q15391 338 aa3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 RABL6Q3YEC7 729 aaPredicted RBP3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 FILIP1LQ4L180 1135 aa3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 BOLA3Q53S33 107 aa3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 TCHHL1Q5QJ38 904 aaPredicted RBP3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 WASH2PQ6VEQ5 465 aa3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 VASH2Q86V25 355 aa3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 CACUL1Q86Y37 369 aa3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 METTL4Q8N3J2 472 aa3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 Q8NBF4 154 aa3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 PRSS33Q8NF86 280 aa3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 OR5T2Q8NGG2 359 aa3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 OR52M1Q8NGK5 317 aa3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 WDR36Q8NI36 951 aaKnown RBP3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 SLC5A11Q8WWX8 675 aa3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 MRPL24Q96A35 216 aaKnown RBP3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 TUBGCP3Q96CW5 907 aa3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 SOSTQ9BQB4 213 aa3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 TBCDQ9BTW9 1192 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms