RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 ADCK1Q86TW2 530 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 CUZD1Q86UP6 607 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 GPSM1Q86YR5 675 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 SLC22A15Q8IZD6 547 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 DPP10Q8N608 796 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 PNPLA1Q8N8W4 532 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 RASGEF1AQ8N9B8 481 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 SIDT2Q8NBJ9 832 aaKnown RBP6.71□□□□□ -1.34
CLCN3-206ENST00000507875 POGLUT1Q8NBL1 392 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 TSTD1Q8NFU3 115 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 CADM4Q8NFZ8 388 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 OR2L2Q8NH16 312 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 SUN3Q8TAQ9 357 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 ATL1Q8WXF7 558 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 KAT2AQ92830 837 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 SGF29Q96ES7 293 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 EGLN2Q96KS0 407 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 FOPNLQ96NB1 174 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 ZNF570Q96NI8 536 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 TBCDQ9BTW9 1192 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 ERVK-6Q9BXR3 956 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 PARD6GQ9BYG4 376 aaPredicted RBP6.71□□□□□ -1.34
CLCN3-206ENST00000507875 NUF2Q9BZD4 464 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 RIBC2Q9H4K1 309 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 WDR55Q9H6Y2 383 aaPredicted RBP6.71□□□□□ -1.34
CLCN3-206ENST00000507875 TREM1Q9NP99 234 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 C12orf4Q9NQ89 552 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 POLE3Q9NRF9 147 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 STX18Q9P2W9 335 aaKnown RBP6.71□□□□□ -1.34
CLCN3-206ENST00000507875 HSPB7Q9UBY9 170 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 CD84Q9UIB8 345 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 ACSL5Q9ULC5 683 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 NDRG2Q9UN36 371 aaKnown RBP6.71□□□□□ -1.34
CLCN3-206ENST00000507875 ZFR2Q9UPR6 939 aaKnown RBP6.71□□□□□ -1.34
CLCN3-206ENST00000507875 SATB2Q9UPW6 733 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 PRSS21Q9Y6M0 314 aa6.71□□□□□ -1.34
CLCN3-206ENST00000507875 TBC1D3DA0A087WVF3 549 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 TBC1D3IA0A087WXS9 549 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 TBC1D3EA0A087X179 549 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 TBC1D3KA0A087X1G2 549 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 HTR3EA5X5Y0 456 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 TBC1D3FA6NER0 549 aaPredicted RBP6.7□□□□□ -1.34
CLCN3-206ENST00000507875 NEMP2A6NFY4 417 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 MGAT4DA6NG13 374 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 TBC1D3LB9A6J9 549 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 GFYI3L273 518 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 SLC22A2O15244 555 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 CBR3O75828 277 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 CDK14O94921 469 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 SEMA4FO95754 770 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 EIF2S1P05198 315 aaKnown RBP6.7□□□□□ -1.34
CLCN3-206ENST00000507875 FHP07954 510 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 TBC1D3HP0C7X1 549 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 COX4I1P13073 169 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 EPHA3P29320 983 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 HSPA14Q0VDF9 509 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 FZD5Q13467 585 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 E2F2Q14209 437 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 SMU1Q2TAY7 513 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 POM121L1PQ3SYA9 428 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 ZNF658BQ4V348 819 aaPredicted RBP6.7□□□□□ -1.34
CLCN3-206ENST00000507875 LRRC73Q5JTD7 316 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 C1orf146Q5VVC0 180 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 TBC1D3GQ6DHY5 549 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 TBC1D3CQ6IPX1 549 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 RNF165Q6ZSG1 346 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 RFLNAQ6ZTI6 216 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 CPNE9Q8IYJ1 553 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 TBC1D3Q8IZP1 549 aaPredicted RBP6.7□□□□□ -1.34
CLCN3-206ENST00000507875 FBXO39Q8N4B4 442 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 CPSF7Q8N684 471 aaKnown RBP6.7□□□□□ -1.34
CLCN3-206ENST00000507875 BEND7Q8N7W2 519 aaPredicted RBP6.7□□□□□ -1.34
CLCN3-206ENST00000507875 ACTRT2Q8TDY3 377 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 ABHD5Q8WTS1 349 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 EEF1AKMT1Q8WVE0 214 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 LIPHQ8WWY8 451 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 NPIPB3Q92617 1050 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 TMEM159Q96B96 161 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 CCDC28BQ9BUN5 200 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 SHCBP1LQ9BZQ2 653 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 RNF32Q9H0A6 362 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 NEK6Q9HC98 313 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 FBXO4Q9UKT5 387 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 SLC17A4Q9Y2C5 497 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 ZFC3H1O60293 1989 aaKnown RBP6.7□□□□□ -1.34
CLCN3-206ENST00000507875 A8MT66 165 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 PRAMEF26H0Y7S4 382 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 JUNP05412 331 aaKnown RBP6.7□□□□□ -1.34
CLCN3-206ENST00000507875 HIST1H2AGP0C0S8 130 aaPredicted RBP6.7□□□□□ -1.34
CLCN3-206ENST00000507875 ZNF888P0CJ79 500 aaPredicted RBP6.7□□□□□ -1.34
CLCN3-206ENST00000507875 THRAP10827 490 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 HIST1H2ADP20671 130 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 CCR7P32248 378 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 PKNOX1P55347 436 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 GMFBP60983 142 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 CHRNEQ04844 493 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 ZNF33BQ06732 778 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 IRF4Q15306 451 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 SYTL3Q4VX76 610 aa6.7□□□□□ -1.34
CLCN3-206ENST00000507875 ZNF678Q5SXM1 525 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms