RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 PHF1O43189 567 aaPredicted RBP2.71□□□□□ -1.98
LSM6-205ENST00000507449 SSX5O60225 188 aa2.71□□□□□ -1.98
LSM6-205ENST00000507449 GALR3O60755 368 aaPredicted RBP2.71□□□□□ -1.98
LSM6-205ENST00000507449 APBB3O95704 486 aa2.71□□□□□ -1.98
LSM6-205ENST00000507449 ECDO95905 644 aaPredicted RBP2.71□□□□□ -1.98
LSM6-205ENST00000507449 IGHV3-9P01782 118 aa2.71□□□□□ -1.98
LSM6-205ENST00000507449 MT-ND1P03886 318 aa2.71□□□□□ -1.98
LSM6-205ENST00000507449 RALAP11233 206 aa2.71□□□□□ -1.98
LSM6-205ENST00000507449 GP9P14770 177 aa2.71□□□□□ -1.98
LSM6-205ENST00000507449 GATA1P15976 413 aaPredicted RBP2.71□□□□□ -1.98
LSM6-205ENST00000507449 PTPN6P29350 595 aa2.71□□□□□ -1.98
LSM6-205ENST00000507449 RFC2P35250 354 aa2.71□□□□□ -1.98
LSM6-205ENST00000507449 ASMTP46597 345 aa2.71□□□□□ -1.98
LSM6-205ENST00000507449 POU3F4P49335 361 aa2.71□□□□□ -1.98
LSM6-205ENST00000507449 NUMBP49757 651 aa2.71□□□□□ -1.98
LSM6-205ENST00000507449 PGFP49763 221 aa2.71□□□□□ -1.98
LSM6-205ENST00000507449 GPC3P51654 580 aa2.71□□□□□ -1.98
LSM6-205ENST00000507449 VCPP55072 806 aaKnown RBP2.71□□□□□ -1.98
LSM6-205ENST00000507449 ZNF33BQ06732 778 aa2.71□□□□□ -1.98
LSM6-205ENST00000507449 ZFP36L1Q07352 338 aaKnown RBP2.71□□□□□ -1.98
LSM6-205ENST00000507449 NME3Q13232 169 aa2.71□□□□□ -1.98
LSM6-205ENST00000507449 RFTN1Q14699 578 aaPredicted RBP2.71□□□□□ -1.98
LSM6-205ENST00000507449 VWA2Q5GFL6 755 aa2.71□□□□□ -1.98
LSM6-205ENST00000507449 TCTEX1D4Q5JR98 221 aa2.71□□□□□ -1.98
LSM6-205ENST00000507449 NHLRC3Q5JS37 347 aa2.71□□□□□ -1.98
LSM6-205ENST00000507449 ACER2Q5QJU3 275 aa2.71□□□□□ -1.98
LSM6-205ENST00000507449 TAF3Q5VWG9 929 aa2.71□□□□□ -1.98
LSM6-205ENST00000507449 ZNF772Q68DY9 489 aaPredicted RBP2.71□□□□□ -1.98
LSM6-205ENST00000507449 PAQR9Q6ZVX9 377 aa2.71□□□□□ -1.98
LSM6-205ENST00000507449 GOLGA7Q7Z5G4 137 aa2.71□□□□□ -1.98
LSM6-205ENST00000507449 SLC25A42Q86VD7 318 aa2.71□□□□□ -1.98
LSM6-205ENST00000507449 MYPOPQ86VE0 399 aaPredicted RBP2.71□□□□□ -1.98
LSM6-205ENST00000507449 RANBP3LQ86VV4 465 aaPredicted RBP2.71□□□□□ -1.98
LSM6-205ENST00000507449 LRRC49Q8IUZ0 686 aa2.71□□□□□ -1.98
LSM6-205ENST00000507449 CCDC36Q8IYA8 594 aa2.71□□□□□ -1.98
LSM6-205ENST00000507449 POM121L12Q8N7R1 296 aa2.71□□□□□ -1.98
LSM6-205ENST00000507449 FAM71CQ8NEG0 241 aa2.71□□□□□ -1.98
LSM6-205ENST00000507449 OR52B4Q8NGK2 314 aa2.71□□□□□ -1.98
LSM6-205ENST00000507449 OR6T1Q8NGN1 323 aa2.71□□□□□ -1.98
LSM6-205ENST00000507449 WDR36Q8NI36 951 aaKnown RBP2.71□□□□□ -1.98
LSM6-205ENST00000507449 RASL10AQ92737 203 aa2.71□□□□□ -1.98
LSM6-205ENST00000507449 DLX4Q92988 240 aaPredicted RBP2.71□□□□□ -1.98
LSM6-205ENST00000507449 LHX4Q969G2 390 aa2.71□□□□□ -1.98
LSM6-205ENST00000507449 SLC25A36Q96CQ1 311 aa2.71□□□□□ -1.98
LSM6-205ENST00000507449 SP140LQ9H930 580 aa2.71□□□□□ -1.98
LSM6-205ENST00000507449 ACTR8Q9H981 624 aa2.71□□□□□ -1.98
LSM6-205ENST00000507449 TAS2R3Q9NYW6 316 aa2.71□□□□□ -1.98
LSM6-205ENST00000507449 SEC14L4Q9UDX3 406 aa2.71□□□□□ -1.98
LSM6-205ENST00000507449 HOOK1Q9UJC3 728 aaKnown RBP2.71□□□□□ -1.98
LSM6-205ENST00000507449 PURGQ9UJV8 347 aaKnown RBP2.71□□□□□ -1.98
LSM6-205ENST00000507449 MRPL11Q9Y3B7 192 aaKnown RBP2.71□□□□□ -1.98
LSM6-205ENST00000507449 CACNA1FO60840 1977 aa2.7□□□□□ -1.98
LSM6-205ENST00000507449 FER1L5A0AVI2 2057 aa2.7□□□□□ -1.98
LSM6-205ENST00000507449 A0A0U1RQV5 110 aa2.7□□□□□ -1.98
LSM6-205ENST00000507449 E9PMD0 336 aa2.7□□□□□ -1.98
LSM6-205ENST00000507449 H0YL77 283 aa2.7□□□□□ -1.98
LSM6-205ENST00000507449 SGK494L7N484 410 aa2.7□□□□□ -1.98
LSM6-205ENST00000507449 PDLIM1O00151 329 aa2.7□□□□□ -1.98
LSM6-205ENST00000507449 PDXKO00764 312 aa2.7□□□□□ -1.98
LSM6-205ENST00000507449 B3GALNT1O75752 331 aa2.7□□□□□ -1.98
LSM6-205ENST00000507449 PDE5AO76074 875 aa2.7□□□□□ -1.98
LSM6-205ENST00000507449 AKR7A3O95154 331 aa2.7□□□□□ -1.98
LSM6-205ENST00000507449 NDUFA7O95182 113 aa2.7□□□□□ -1.98
LSM6-205ENST00000507449 TRIM16O95361 564 aa2.7□□□□□ -1.98
LSM6-205ENST00000507449 WNT2P09544 360 aa2.7□□□□□ -1.98
LSM6-205ENST00000507449 GMFBP60983 142 aa2.7□□□□□ -1.98
LSM6-205ENST00000507449 HTD2P86397 168 aa2.7□□□□□ -1.98
LSM6-205ENST00000507449 SHROOM1Q2M3G4 852 aaPredicted RBP2.7□□□□□ -1.98
LSM6-205ENST00000507449 ADPRMQ3LIE5 342 aa2.7□□□□□ -1.98
LSM6-205ENST00000507449 C14orf28Q4W4Y0 310 aa2.7□□□□□ -1.98
LSM6-205ENST00000507449 REP15Q6BDI9 236 aa2.7□□□□□ -1.98
LSM6-205ENST00000507449 CCBE1Q6UXH8 406 aaPredicted RBP2.7□□□□□ -1.98
LSM6-205ENST00000507449 UNC5DQ6UXZ4 953 aa2.7□□□□□ -1.98
LSM6-205ENST00000507449 GPBP1Q86WP2 473 aa2.7□□□□□ -1.98
LSM6-205ENST00000507449 BCORP1Q8N888 145 aa2.7□□□□□ -1.98
LSM6-205ENST00000507449 FAM222BQ8WU58 562 aa2.7□□□□□ -1.98
LSM6-205ENST00000507449 U2AF1L4Q8WU68 220 aaKnown RBP2.7□□□□□ -1.98
LSM6-205ENST00000507449 NCLNQ969V3 563 aa2.7□□□□□ -1.98
LSM6-205ENST00000507449 C19orf43Q9BQ61 176 aa2.7□□□□□ -1.98
LSM6-205ENST00000507449 FAM173AQ9BQD7 235 aa2.7□□□□□ -1.98
LSM6-205ENST00000507449 TSPY26PQ9H489 355 aa2.7□□□□□ -1.98
LSM6-205ENST00000507449 RNF41Q9H4P4 317 aaPredicted RBP2.7□□□□□ -1.98
LSM6-205ENST00000507449 ECT2Q9H8V3 914 aa2.7□□□□□ -1.98
LSM6-205ENST00000507449 YAE1D1Q9NRH1 226 aa2.7□□□□□ -1.98
LSM6-205ENST00000507449 FAM114A2Q9NRY5 505 aa2.7□□□□□ -1.98
LSM6-205ENST00000507449 CENPMQ9NSP4 180 aa2.7□□□□□ -1.98
LSM6-205ENST00000507449 GPR83Q9NYM4 423 aa2.7□□□□□ -1.98
LSM6-205ENST00000507449 P2RX2Q9UBL9 471 aa2.7□□□□□ -1.98
LSM6-205ENST00000507449 BCAP29Q9UHQ4 241 aa2.7□□□□□ -1.98
LSM6-205ENST00000507449 ZNF490Q9ULM2 529 aaPredicted RBP2.7□□□□□ -1.98
LSM6-205ENST00000507449 FZR1Q9UM11 496 aa2.7□□□□□ -1.98
LSM6-205ENST00000507449 MTF2Q9Y483 593 aaPredicted RBP2.7□□□□□ -1.98
LSM6-205ENST00000507449 CSAG2Q9Y5P2 127 aa2.7□□□□□ -1.98
LSM6-205ENST00000507449 ABCC4O15439 1325 aa2.69□□□□□ -1.98
LSM6-205ENST00000507449 IGHV3OR16-12A0A075B7B8 117 aa2.69□□□□□ -1.98
LSM6-205ENST00000507449 LRIT2A6NDA9 550 aa2.69□□□□□ -1.98
LSM6-205ENST00000507449 F8WDY8 70 aa2.69□□□□□ -1.98
LSM6-205ENST00000507449 EI24O14681 340 aa2.69□□□□□ -1.98
LSM6-205ENST00000507449 CHADO15335 359 aa2.69□□□□□ -1.98
LSM6-205ENST00000507449 SDC3O75056 442 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms