RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 SNNO75324 88 aaPredicted RBP6.72□□□□□ -1.33
GYPB-206ENST00000506516 SLC25A12O75746 678 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 LRATO95237 230 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 WISP1O95388 367 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 JUNP05412 331 aaKnown RBP6.72□□□□□ -1.33
GYPB-206ENST00000506516 CT62P0C5K7 136 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 KITP10721 976 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 SDC1P18827 310 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 PRPS1L1P21108 318 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 TACR1P25103 407 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 SSTR4P31391 388 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 HPCAL1P37235 193 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 ST13P50502 369 aaKnown RBP6.72□□□□□ -1.33
GYPB-206ENST00000506516 NR0B1P51843 470 aaKnown RBP6.72□□□□□ -1.33
GYPB-206ENST00000506516 NCBP2P52298 156 aaKnown RBP eCLIP6.72□□□□□ -1.33
GYPB-206ENST00000506516 MANFP55145 182 aaKnown RBP6.72□□□□□ -1.33
GYPB-206ENST00000506516 DCAF7P61962 342 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 PPP2R2AP63151 447 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 SRSF11Q05519 484 aaKnown RBP6.72□□□□□ -1.33
GYPB-206ENST00000506516 MGAT2Q10469 447 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 EBPQ15125 230 aaKnown RBP6.72□□□□□ -1.33
GYPB-206ENST00000506516 CEBPEQ15744 281 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 IGFBP7Q16270 282 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 TRMT12Q53H54 448 aaKnown RBP6.72□□□□□ -1.33
GYPB-206ENST00000506516 TTMPQ5BVD1 217 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 ZNF628Q5EBL2 1059 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 IL23RQ5VWK5 629 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 CES4AQ5XG92 561 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 FAM111BQ6SJ93 734 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 C16orf47Q6ZP98 133 aaPredicted RBP6.72□□□□□ -1.33
GYPB-206ENST00000506516 GALNTL5Q7Z4T8 443 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 C9orf40Q8IXQ3 194 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 LRRC34Q8IZ02 419 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 GALNT11Q8NCW6 608 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 MDS2Q8NDY4 140 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 C17orf47Q8NEP4 570 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 OR52R1Q8NGF1 315 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 C16orf52Q8NHV5 167 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 ZFP28Q8NHY6 868 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 PIWIL2Q8TC59 973 aaKnown RBP6.72□□□□□ -1.33
GYPB-206ENST00000506516 ZNF675Q8TD23 568 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 LRRC8CQ8TDW0 803 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 FAR1Q8WVX9 515 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 GFM2Q969S9 779 aaKnown RBP6.72□□□□□ -1.33
GYPB-206ENST00000506516 MIB2Q96AX9 1013 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 CTHRC1Q96CG8 243 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 ZBED6CLQ96FA7 236 aaPredicted RBP6.72□□□□□ -1.33
GYPB-206ENST00000506516 SCMH1Q96GD3 660 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 ZNF764Q96H86 408 aaPredicted RBP6.72□□□□□ -1.33
GYPB-206ENST00000506516 PPP1R36Q96LQ0 422 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 GAL3ST4Q96RP7 486 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 NUF2Q9BZD4 464 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 TRIM4Q9C037 500 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 WWTR1Q9GZV5 400 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 AKTIPQ9H8T0 292 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 INTS9Q9NV88 658 aaKnown RBP6.72□□□□□ -1.33
GYPB-206ENST00000506516 ATAD3AQ9NVI7 634 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 ASF1BQ9NVP2 202 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 TAS2R9Q9NYW1 312 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 MAT2BQ9NZL9 334 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 NOP53Q9NZM5 478 aaKnown RBP6.72□□□□□ -1.33
GYPB-206ENST00000506516 ZNF639Q9UID6 485 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 EXO1Q9UQ84 846 aaKnown RBP6.72□□□□□ -1.33
GYPB-206ENST00000506516 ZFYVE26Q68DK2 2539 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 A0A087WV62 115 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 UQCRHLA0A096LP55 91 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 TCP11X1B4DZS4 312 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 PLOD2O00469 737 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 TP53I11O14683 189 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 PDPK1O15530 556 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 PEX1O43933 1283 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 NME2P1O60361 137 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 PLOD3O60568 738 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 COQ9O75208 318 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 OR6B1O95007 311 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 CLPSP04118 112 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 P04436 131 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 G6PDP11413 515 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 NAGAP17050 411 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 LBPP18428 481 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 S1PR1P21453 382 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 CNR1P21554 472 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 DRD5P21918 477 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 NME2P22392 152 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 SOX3P41225 446 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 PPICP45877 212 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 TMED10P49755 219 aaKnown RBP6.71□□□□□ -1.34
GYPB-206ENST00000506516 EMDP50402 254 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 CLDN8P56748 225 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 PSPHP78330 225 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 RPP38P78345 283 aaKnown RBP6.71□□□□□ -1.34
GYPB-206ENST00000506516 MRPS35P82673 323 aaKnown RBP6.71□□□□□ -1.34
GYPB-206ENST00000506516 ALDH6A1Q02252 535 aaKnown RBP6.71□□□□□ -1.34
GYPB-206ENST00000506516 DUSP2Q05923 314 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 EXOSC7Q15024 291 aaKnown RBP6.71□□□□□ -1.34
GYPB-206ENST00000506516 LTB4RQ15722 352 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 HSP90B2PQ58FF3 399 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 CPTPQ5TA50 214 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 SLC22A10Q63ZE4 541 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 RTL4Q6ZR62 310 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms