RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 KRTCAP2Q8N6L1 136 aa16.42■□□□□ 0.22
SMN1-204ENST00000506163 OR2M7Q8NG81 312 aa16.42■□□□□ 0.22
SMN1-204ENST00000506163 OR7A2PQ8NGA2 310 aa16.42■□□□□ 0.22
SMN1-204ENST00000506163 ERP27Q96DN0 273 aa16.42■□□□□ 0.22
SMN1-204ENST00000506163 ZNF764Q96H86 408 aaPredicted RBP16.42■□□□□ 0.22
SMN1-204ENST00000506163 VSTM2LQ96N03 204 aa16.42■□□□□ 0.22
SMN1-204ENST00000506163 NUF2Q9BZD4 464 aa16.42■□□□□ 0.22
SMN1-204ENST00000506163 VIPAS39Q9H9C1 493 aa16.42■□□□□ 0.22
SMN1-204ENST00000506163 GPR55Q9Y2T6 319 aaPredicted RBP16.42■□□□□ 0.22
SMN1-204ENST00000506163 ZNF407Q9C0G0 2248 aa16.42■□□□□ 0.22
SMN1-204ENST00000506163 GTF3C1Q12789 2109 aa16.42■□□□□ 0.22
SMN1-204ENST00000506163 EXPH5Q8NEV8 1989 aa16.41■□□□□ 0.22
SMN1-204ENST00000506163 UPK1AO00322 258 aa16.41■□□□□ 0.22
SMN1-204ENST00000506163 PLOD2O00469 737 aa16.41■□□□□ 0.22
SMN1-204ENST00000506163 SNUPNO95149 360 aaKnown RBP16.41■□□□□ 0.22
SMN1-204ENST00000506163 CT45A8P0DMV1 189 aa16.41■□□□□ 0.22
SMN1-204ENST00000506163 CT45A9P0DMV2 189 aa16.41■□□□□ 0.22
SMN1-204ENST00000506163 G6PDP11413 515 aa16.41■□□□□ 0.22
SMN1-204ENST00000506163 ABCD3P28288 659 aa16.41■□□□□ 0.22
SMN1-204ENST00000506163 PPICP45877 212 aa16.41■□□□□ 0.22
SMN1-204ENST00000506163 CORO7P57737 925 aa16.41■□□□□ 0.22
SMN1-204ENST00000506163 OCRLQ01968 901 aa16.41■□□□□ 0.22
SMN1-204ENST00000506163 EMX2Q04743 252 aa16.41■□□□□ 0.22
SMN1-204ENST00000506163 UBAP2LQ14157 1087 aaKnown RBP16.41■□□□□ 0.22
SMN1-204ENST00000506163 CT45A2Q5DJT8 189 aa16.41■□□□□ 0.22
SMN1-204ENST00000506163 SLC22A10Q63ZE4 541 aa16.41■□□□□ 0.22
SMN1-204ENST00000506163 BICRALQ6AI39 1079 aa16.41■□□□□ 0.22
SMN1-204ENST00000506163 TMEM107Q6UX40 140 aa16.41■□□□□ 0.22
SMN1-204ENST00000506163 NPSR1Q6W5P4 371 aa16.41■□□□□ 0.22
SMN1-204ENST00000506163 FGD2Q7Z6J4 655 aa16.41■□□□□ 0.22
SMN1-204ENST00000506163 TAGAPQ8N103 731 aa16.41■□□□□ 0.22
SMN1-204ENST00000506163 FAM98AQ8NCA5 519 aaKnown RBP16.41■□□□□ 0.22
SMN1-204ENST00000506163 PPCDCQ96CD2 204 aa16.41■□□□□ 0.22
SMN1-204ENST00000506163 ELP4Q96EB1 424 aa16.41■□□□□ 0.22
SMN1-204ENST00000506163 LCORQ96JN0 433 aaPredicted RBP16.41■□□□□ 0.22
SMN1-204ENST00000506163 GPR137Q96N19 417 aa16.41■□□□□ 0.22
SMN1-204ENST00000506163 MANSC1Q9H8J5 431 aa16.41■□□□□ 0.22
SMN1-204ENST00000506163 SACM1LQ9NTJ5 587 aa16.41■□□□□ 0.22
SMN1-204ENST00000506163 ARGLU1Q9NWB6 273 aaPredicted RBP16.41■□□□□ 0.22
SMN1-204ENST00000506163 SH3BP4Q9P0V3 963 aa16.41■□□□□ 0.22
SMN1-204ENST00000506163 SEC14L3Q9UDX4 400 aa16.41■□□□□ 0.22
SMN1-204ENST00000506163 ATP6V1HQ9UI12 483 aa16.41■□□□□ 0.22
SMN1-204ENST00000506163 CNOT11Q9UKZ1 510 aaKnown RBP16.41■□□□□ 0.22
SMN1-204ENST00000506163 C19orf53Q9UNZ5 99 aaPredicted RBP16.41■□□□□ 0.22
SMN1-204ENST00000506163 OSGIN2Q9Y236 505 aa16.41■□□□□ 0.22
SMN1-204ENST00000506163 DNAJC13O75165 2243 aa16.4■□□□□ 0.22
SMN1-204ENST00000506163 DIDO1Q9BTC0 2240 aaKnown RBP16.4■□□□□ 0.22
SMN1-204ENST00000506163 A0A087WV62 115 aa16.4■□□□□ 0.22
SMN1-204ENST00000506163 ASNA1O43681 348 aa16.4■□□□□ 0.22
SMN1-204ENST00000506163 HS6ST1O60243 411 aa16.4■□□□□ 0.22
SMN1-204ENST00000506163 GLSO94925 669 aaPredicted RBP16.4■□□□□ 0.22
SMN1-204ENST00000506163 PSMG1O95456 288 aa16.4■□□□□ 0.22
SMN1-204ENST00000506163 ABCB1P08183 1280 aaPredicted RBP16.4■□□□□ 0.22
SMN1-204ENST00000506163 LAMP1P11279 417 aa16.4■□□□□ 0.22
SMN1-204ENST00000506163 ZNF24P17028 368 aa16.4■□□□□ 0.22
SMN1-204ENST00000506163 DRD5P21918 477 aa16.4■□□□□ 0.22
SMN1-204ENST00000506163 NTSP30990 170 aa16.4■□□□□ 0.22
SMN1-204ENST00000506163 ASMTP46597 345 aa16.4■□□□□ 0.22
SMN1-204ENST00000506163 DIO3P55073 304 aa16.4■□□□□ 0.22
SMN1-204ENST00000506163 HSF1Q00613 529 aa16.4■□□□□ 0.22
SMN1-204ENST00000506163 CMPK2Q5EBM0 449 aa16.4■□□□□ 0.22
SMN1-204ENST00000506163 PRAMEF20Q5VT98 475 aa16.4■□□□□ 0.22
SMN1-204ENST00000506163 MYO7BQ6PIF6 2116 aa16.4■□□□□ 0.22
SMN1-204ENST00000506163 GFRALQ6UXV0 394 aa16.4■□□□□ 0.22
SMN1-204ENST00000506163 RIMKLAQ8IXN7 391 aa16.4■□□□□ 0.22
SMN1-204ENST00000506163 OR2L13Q8N349 312 aa16.4■□□□□ 0.22
SMN1-204ENST00000506163 FAM26EQ8N5C1 309 aa16.4■□□□□ 0.22
SMN1-204ENST00000506163 FAM13CQ8NE31 585 aa16.4■□□□□ 0.22
SMN1-204ENST00000506163 OR52N2Q8NGI0 321 aa16.4■□□□□ 0.22
SMN1-204ENST00000506163 ZNF75CPQ92670 426 aaPredicted RBP16.4■□□□□ 0.22
SMN1-204ENST00000506163 NTNG2Q96CW9 530 aa16.4■□□□□ 0.22
SMN1-204ENST00000506163 MEAF6Q9HAF1 191 aa16.4■□□□□ 0.22
SMN1-204ENST00000506163 FOLH1BQ9HBA9 442 aa16.4■□□□□ 0.22
SMN1-204ENST00000506163 TUBA8Q9NY65 449 aaPredicted RBP16.4■□□□□ 0.22
SMN1-204ENST00000506163 MARCOQ9UEW3 520 aaPredicted RBP16.4■□□□□ 0.22
SMN1-204ENST00000506163 PRODH2Q9UF12 536 aa16.4■□□□□ 0.22
SMN1-204ENST00000506163 ERRFI1Q9UJM3 462 aaPredicted RBP16.4■□□□□ 0.22
SMN1-204ENST00000506163 CFL2Q9Y281 166 aa16.4■□□□□ 0.22
SMN1-204ENST00000506163 SCAMP2O15127 329 aaKnown RBP16.39■□□□□ 0.21
SMN1-204ENST00000506163 TO15178 435 aa16.39■□□□□ 0.21
SMN1-204ENST00000506163 PDPK1O15530 556 aa16.39■□□□□ 0.21
SMN1-204ENST00000506163 BCAS2O75934 225 aaPredicted RBP16.39■□□□□ 0.21
SMN1-204ENST00000506163 PRPS2P11908 318 aa16.39■□□□□ 0.21
SMN1-204ENST00000506163 CDK9P50750 372 aaKnown RBP16.39■□□□□ 0.21
SMN1-204ENST00000506163 HSPB3Q12988 150 aa16.39■□□□□ 0.21
SMN1-204ENST00000506163 ELOAQ14241 798 aaKnown RBP16.39■□□□□ 0.21
SMN1-204ENST00000506163 FAM47EQ6ZV65 393 aa16.39■□□□□ 0.21
SMN1-204ENST00000506163 LARP4Q71RC2 724 aaKnown RBP eCLIP16.39■□□□□ 0.21
SMN1-204ENST00000506163 WDR53Q7Z5U6 358 aaPredicted RBP16.39■□□□□ 0.21
SMN1-204ENST00000506163 FBXW8Q8N3Y1 598 aa16.39■□□□□ 0.21
SMN1-204ENST00000506163 POGLUT1Q8NBL1 392 aa16.39■□□□□ 0.21
SMN1-204ENST00000506163 OR4N2Q8NGD1 307 aa16.39■□□□□ 0.21
SMN1-204ENST00000506163 OMA1Q96E52 524 aa16.39■□□□□ 0.21
SMN1-204ENST00000506163 MAGED4Q96JG8 741 aa16.39■□□□□ 0.21
SMN1-204ENST00000506163 BTBD9Q96Q07 612 aa16.39■□□□□ 0.21
SMN1-204ENST00000506163 FAM173AQ9BQD7 235 aa16.39■□□□□ 0.21
SMN1-204ENST00000506163 TTTY12Q9BZ98 90 aa16.39■□□□□ 0.21
SMN1-204ENST00000506163 ZNF446Q9NWS9 450 aa16.39■□□□□ 0.21
SMN1-204ENST00000506163 ASIC5Q9NY37 505 aa16.39■□□□□ 0.21
SMN1-204ENST00000506163 FRG2CA6NGY1 282 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms