RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 BEST3Q8N1M1 668 aa12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 OR2L13Q8N349 312 aa12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 POU5F2Q8N7G0 328 aa12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 VPS37AQ8NEZ2 397 aa12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 ADIPOR1Q96A54 375 aa12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 C16orf58Q96GQ5 468 aa12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 CCDC115Q96NT0 180 aa12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 AGAP4Q96P64 663 aa12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 PANX1Q96RD7 426 aa12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 UBL7Q96S82 380 aaPredicted RBP12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 CCDC106Q9BWC9 280 aa12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 WWTR1Q9GZV5 400 aa12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 MYLK2Q9H1R3 596 aa12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 FOLH1BQ9HBA9 442 aa12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 C3orf14Q9HBI5 128 aa12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 ZNF71Q9NQZ8 489 aaPredicted RBP12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 ZCCHC3Q9NUD5 404 aaKnown RBP12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 ANKRD10Q9NXR5 420 aa12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 TAS2R9Q9NYW1 312 aa12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 BTNL2Q9UIR0 455 aa12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 PCDHGB4Q9UN71 923 aa12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 HEMK1Q9Y5R4 338 aaPredicted RBP12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 KALRNO60229 2985 aa12.29□□□□□ -0.44
PDLIM7-212ENST00000504380 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.28□□□□□ -0.44
PDLIM7-212ENST00000504380 C2orf92A0A1B0GVN3 265 aa12.28□□□□□ -0.44
PDLIM7-212ENST00000504380 OR6C76A6NM76 312 aa12.28□□□□□ -0.44
PDLIM7-212ENST00000504380 MKRN2OSH3BPM6 223 aa12.28□□□□□ -0.44
PDLIM7-212ENST00000504380 RFXANKO14593 260 aa12.28□□□□□ -0.44
PDLIM7-212ENST00000504380 OR2J2O76002 312 aa12.28□□□□□ -0.44
PDLIM7-212ENST00000504380 SNRPB2P08579 225 aaKnown RBP12.28□□□□□ -0.44
PDLIM7-212ENST00000504380 CORO7P57737 925 aa12.28□□□□□ -0.44
PDLIM7-212ENST00000504380 RPS26P62854 115 aaKnown RBP12.28□□□□□ -0.44
PDLIM7-212ENST00000504380 IRX1P78414 480 aaPredicted RBP12.28□□□□□ -0.44
PDLIM7-212ENST00000504380 KCNAB2Q13303 367 aa12.28□□□□□ -0.44
PDLIM7-212ENST00000504380 TP53BP2Q13625 1128 aa12.28□□□□□ -0.44
PDLIM7-212ENST00000504380 CRB2Q5IJ48 1285 aa12.28□□□□□ -0.44
PDLIM7-212ENST00000504380 COLEC12Q5KU26 742 aa12.28□□□□□ -0.44
PDLIM7-212ENST00000504380 C6orf10Q5SRN2 563 aa12.28□□□□□ -0.44
PDLIM7-212ENST00000504380 ZNF468Q5VIY5 522 aaPredicted RBP12.28□□□□□ -0.44
PDLIM7-212ENST00000504380 ABHD17BQ5VST6 288 aa12.28□□□□□ -0.44
PDLIM7-212ENST00000504380 HLA-DQA1Q5Y7H0 255 aa12.28□□□□□ -0.44
PDLIM7-212ENST00000504380 ISLR2Q6UXK2 745 aa12.28□□□□□ -0.44
PDLIM7-212ENST00000504380 NPSR1Q6W5P4 371 aa12.28□□□□□ -0.44
PDLIM7-212ENST00000504380 RETREG3Q86VR2 466 aa12.28□□□□□ -0.44
PDLIM7-212ENST00000504380 SNX32Q86XE0 403 aa12.28□□□□□ -0.44
PDLIM7-212ENST00000504380 SLC5A8Q8N695 610 aa12.28□□□□□ -0.44
PDLIM7-212ENST00000504380 PSMA8Q8TAA3 256 aa12.28□□□□□ -0.44
PDLIM7-212ENST00000504380 BCAS4Q8TDM0 211 aa12.28□□□□□ -0.44
PDLIM7-212ENST00000504380 GTF2H4Q92759 462 aa12.28□□□□□ -0.44
PDLIM7-212ENST00000504380 GIMAP5Q96F15 307 aa12.28□□□□□ -0.44
PDLIM7-212ENST00000504380 ITCHQ96J02 903 aa12.28□□□□□ -0.44
PDLIM7-212ENST00000504380 ZNF354BQ96LW1 612 aa12.28□□□□□ -0.44
PDLIM7-212ENST00000504380 LMF1Q96S06 567 aa12.28□□□□□ -0.44
PDLIM7-212ENST00000504380 NXF5Q9H1B4 397 aaKnown RBP12.28□□□□□ -0.44
PDLIM7-212ENST00000504380 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.28□□□□□ -0.44
PDLIM7-212ENST00000504380 STMN3Q9NZ72 180 aa12.28□□□□□ -0.44
PDLIM7-212ENST00000504380 SLAMF8Q9P0V8 285 aa12.28□□□□□ -0.44
PDLIM7-212ENST00000504380 MYOTQ9UBF9 498 aa12.28□□□□□ -0.44
PDLIM7-212ENST00000504380 TP53TG5Q9Y2B4 290 aa12.28□□□□□ -0.44
PDLIM7-212ENST00000504380 CSAG2Q9Y5P2 127 aa12.28□□□□□ -0.44
PDLIM7-212ENST00000504380 CAPN7Q9Y6W3 813 aa12.28□□□□□ -0.44
PDLIM7-212ENST00000504380 RNF103-CHMP3A0A140T963 221 aa12.27□□□□□ -0.45
PDLIM7-212ENST00000504380 A0A1W2PP18 115 aa12.27□□□□□ -0.45
PDLIM7-212ENST00000504380 FBP2O00757 339 aa12.27□□□□□ -0.45
PDLIM7-212ENST00000504380 NDUFAB1O14561 156 aa12.27□□□□□ -0.45
PDLIM7-212ENST00000504380 COQ9O75208 318 aa12.27□□□□□ -0.45
PDLIM7-212ENST00000504380 ITGA10O75578 1167 aa12.27□□□□□ -0.45
PDLIM7-212ENST00000504380 BCAS2O75934 225 aaPredicted RBP12.27□□□□□ -0.45
PDLIM7-212ENST00000504380 SLITRK5O94991 958 aa12.27□□□□□ -0.45
PDLIM7-212ENST00000504380 PSMG1O95456 288 aa12.27□□□□□ -0.45
PDLIM7-212ENST00000504380 NADKO95544 446 aaPredicted RBP12.27□□□□□ -0.45
PDLIM7-212ENST00000504380 WDPCPO95876 746 aa12.27□□□□□ -0.45
PDLIM7-212ENST00000504380 ALPPP05187 535 aa12.27□□□□□ -0.45
PDLIM7-212ENST00000504380 ACP2P11117 423 aa12.27□□□□□ -0.45
PDLIM7-212ENST00000504380 CD97P48960 835 aa12.27□□□□□ -0.45
PDLIM7-212ENST00000504380 AP2B1P63010 937 aa12.27□□□□□ -0.45
PDLIM7-212ENST00000504380 RHDQ02161 417 aa12.27□□□□□ -0.45
PDLIM7-212ENST00000504380 LY6DQ14210 128 aa12.27□□□□□ -0.45
PDLIM7-212ENST00000504380 LASP1Q14847 261 aaKnown RBP12.27□□□□□ -0.45
PDLIM7-212ENST00000504380 MEP1AQ16819 746 aa12.27□□□□□ -0.45
PDLIM7-212ENST00000504380 PIGGQ5H8A4 983 aa12.27□□□□□ -0.45
PDLIM7-212ENST00000504380 GKAP1Q5VSY0 366 aaPredicted RBP12.27□□□□□ -0.45
PDLIM7-212ENST00000504380 PCSK4Q6UW60 755 aa12.27□□□□□ -0.45
PDLIM7-212ENST00000504380 C6orf120Q7Z4R8 191 aa12.27□□□□□ -0.45
PDLIM7-212ENST00000504380 ZNF441Q8N8Z8 693 aa12.27□□□□□ -0.45
PDLIM7-212ENST00000504380 CCDC197Q8NCU1 140 aa12.27□□□□□ -0.45
PDLIM7-212ENST00000504380 CATSPER1Q8NEC5 780 aa12.27□□□□□ -0.45
PDLIM7-212ENST00000504380 OR4N2Q8NGD1 307 aa12.27□□□□□ -0.45
PDLIM7-212ENST00000504380 OR5L2Q8NGL0 311 aa12.27□□□□□ -0.45
PDLIM7-212ENST00000504380 OR8K3Q8NH51 312 aa12.27□□□□□ -0.45
PDLIM7-212ENST00000504380 NUBPLQ8TB37 319 aa12.27□□□□□ -0.45
PDLIM7-212ENST00000504380 PNPT1Q8TCS8 783 aaKnown RBP12.27□□□□□ -0.45
PDLIM7-212ENST00000504380 AURKBQ96GD4 344 aaPredicted RBP12.27□□□□□ -0.45
PDLIM7-212ENST00000504380 VSTM2LQ96N03 204 aa12.27□□□□□ -0.45
PDLIM7-212ENST00000504380 SMAD5Q99717 465 aaKnown RBP12.27□□□□□ -0.45
PDLIM7-212ENST00000504380 SLC35A5Q9BS91 424 aa12.27□□□□□ -0.45
PDLIM7-212ENST00000504380 PAIP1Q9H074 479 aaKnown RBP12.27□□□□□ -0.45
PDLIM7-212ENST00000504380 RMND5AQ9H871 391 aa12.27□□□□□ -0.45
PDLIM7-212ENST00000504380 IL1RL2Q9HB29 575 aa12.27□□□□□ -0.45
PDLIM7-212ENST00000504380 NTMQ9P121 344 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms