RNA–Protein interactions for RNA: ENST00000503638.1

PGGT1B-204, Transcript of protein geranylgeranyltransferase type I subunit beta, humanhuman

TSL 3

Gene PGGT1B, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGGT1B-204ENST00000503638 ZCCHC3Q9NUD5 404 aaKnown RBP12.42□□□□□ -0.42
PGGT1B-204ENST00000503638 TAS2R9Q9NYW1 312 aa12.42□□□□□ -0.42
PGGT1B-204ENST00000503638 CCDC167Q9P0B6 97 aa12.42□□□□□ -0.42
PGGT1B-204ENST00000503638 MYOTQ9UBF9 498 aa12.42□□□□□ -0.42
PGGT1B-204ENST00000503638 ERVK-11Q9UQG0 969 aa12.42□□□□□ -0.42
PGGT1B-204ENST00000503638 BOD1L1Q8NFC6 3051 aa12.42□□□□□ -0.42
PGGT1B-204ENST00000503638 MED13Q9UHV7 2174 aa12.42□□□□□ -0.42
PGGT1B-204ENST00000503638 FAM234BA2RU67 622 aa12.41□□□□□ -0.42
PGGT1B-204ENST00000503638 DPM1O60762 260 aa12.41□□□□□ -0.42
PGGT1B-204ENST00000503638 NME6O75414 186 aaPredicted RBP12.41□□□□□ -0.42
PGGT1B-204ENST00000503638 ANP32DO95626 131 aa12.41□□□□□ -0.42
PGGT1B-204ENST00000503638 WDPCPO95876 746 aa12.41□□□□□ -0.42
PGGT1B-204ENST00000503638 CBX7O95931 251 aa12.41□□□□□ -0.42
PGGT1B-204ENST00000503638 PDGFAP04085 211 aa12.41□□□□□ -0.42
PGGT1B-204ENST00000503638 IL6P05231 212 aa12.41□□□□□ -0.42
PGGT1B-204ENST00000503638 PGRP06401 933 aa12.41□□□□□ -0.42
PGGT1B-204ENST00000503638 IL12AP29459 219 aa12.41□□□□□ -0.42
PGGT1B-204ENST00000503638 SOX11P35716 441 aa12.41□□□□□ -0.42
PGGT1B-204ENST00000503638 NR0B1P51843 470 aaKnown RBP12.41□□□□□ -0.42
PGGT1B-204ENST00000503638 NRG3P56975 720 aa12.41□□□□□ -0.42
PGGT1B-204ENST00000503638 MLF1P58340 268 aa12.41□□□□□ -0.42
PGGT1B-204ENST00000503638 KCNC4Q03721 635 aa12.41□□□□□ -0.42
PGGT1B-204ENST00000503638 TP53BP2Q13625 1128 aa12.41□□□□□ -0.42
PGGT1B-204ENST00000503638 EBPQ15125 230 aaKnown RBP12.41□□□□□ -0.42
PGGT1B-204ENST00000503638 ZNHIT3Q15649 155 aaPredicted RBP12.41□□□□□ -0.42
PGGT1B-204ENST00000503638 C6orf10Q5SRN2 563 aa12.41□□□□□ -0.42
PGGT1B-204ENST00000503638 DNAJC14Q6Y2X3 702 aaPredicted RBP12.41□□□□□ -0.42
PGGT1B-204ENST00000503638 CAMKMTQ7Z624 323 aa12.41□□□□□ -0.42
PGGT1B-204ENST00000503638 PTRH1Q86Y79 214 aaKnown RBP12.41□□□□□ -0.42
PGGT1B-204ENST00000503638 TAGAPQ8N103 731 aa12.41□□□□□ -0.42
PGGT1B-204ENST00000503638 LGI4Q8N135 537 aa12.41□□□□□ -0.42
PGGT1B-204ENST00000503638 ZNF615Q8N8J6 731 aa12.41□□□□□ -0.42
PGGT1B-204ENST00000503638 TEX19Q8NA77 164 aa12.41□□□□□ -0.42
PGGT1B-204ENST00000503638 OR8J2Q8NGG1 315 aa12.41□□□□□ -0.42
PGGT1B-204ENST00000503638 OR8K3Q8NH51 312 aa12.41□□□□□ -0.42
PGGT1B-204ENST00000503638 OR5AK3PQ8NH89 298 aa12.41□□□□□ -0.42
PGGT1B-204ENST00000503638 FBXO30Q8TB52 745 aa12.41□□□□□ -0.42
PGGT1B-204ENST00000503638 ERP27Q96DN0 273 aa12.41□□□□□ -0.42
PGGT1B-204ENST00000503638 PANX1Q96RD7 426 aa12.41□□□□□ -0.42
PGGT1B-204ENST00000503638 LMF1Q96S06 567 aa12.41□□□□□ -0.42
PGGT1B-204ENST00000503638 ITPAQ9BY32 194 aa12.41□□□□□ -0.42
PGGT1B-204ENST00000503638 SLC25A18Q9H1K4 315 aa12.41□□□□□ -0.42
PGGT1B-204ENST00000503638 RMND5AQ9H871 391 aa12.41□□□□□ -0.42
PGGT1B-204ENST00000503638 NEUROD4Q9HD90 331 aa12.41□□□□□ -0.42
PGGT1B-204ENST00000503638 FAM120CQ9NX05 1096 aaKnown RBP12.41□□□□□ -0.42
PGGT1B-204ENST00000503638 LUZP4Q9P127 313 aa12.41□□□□□ -0.42
PGGT1B-204ENST00000503638 YARS2Q9Y2Z4 477 aaKnown RBP12.41□□□□□ -0.42
PGGT1B-204ENST00000503638 OR10H1Q9Y4A9 318 aa12.41□□□□□ -0.42
PGGT1B-204ENST00000503638 HEMK1Q9Y5R4 338 aaPredicted RBP12.41□□□□□ -0.42
PGGT1B-204ENST00000503638 A0A087WV62 115 aa12.4□□□□□ -0.42
PGGT1B-204ENST00000503638 PRSS51A0A1B0GVH4 220 aa12.4□□□□□ -0.42
PGGT1B-204ENST00000503638 OR5H15A6NDH6 313 aa12.4□□□□□ -0.42
PGGT1B-204ENST00000503638 CCDC154A6NI56 674 aa12.4□□□□□ -0.42
PGGT1B-204ENST00000503638 A8MVJ9 347 aa12.4□□□□□ -0.42
PGGT1B-204ENST00000503638 UPK1AO00322 258 aa12.4□□□□□ -0.42
PGGT1B-204ENST00000503638 RNASET2O00584 256 aaKnown RBP12.4□□□□□ -0.42
PGGT1B-204ENST00000503638 EMC8O43402 210 aa12.4□□□□□ -0.42
PGGT1B-204ENST00000503638 PLOD3O60568 738 aa12.4□□□□□ -0.42
PGGT1B-204ENST00000503638 CLPSP04118 112 aa12.4□□□□□ -0.42
PGGT1B-204ENST00000503638 GPX3P22352 226 aa12.4□□□□□ -0.42
PGGT1B-204ENST00000503638 KRT20P35900 424 aa12.4□□□□□ -0.42
PGGT1B-204ENST00000503638 CHI3L1P36222 383 aaPredicted RBP12.4□□□□□ -0.42
PGGT1B-204ENST00000503638 CCT3P49368 545 aaKnown RBP12.4□□□□□ -0.42
PGGT1B-204ENST00000503638 CYB561P49447 251 aa12.4□□□□□ -0.42
PGGT1B-204ENST00000503638 ATP4BP51164 291 aa12.4□□□□□ -0.42
PGGT1B-204ENST00000503638 NFATC3Q12968 1075 aa12.4□□□□□ -0.42
PGGT1B-204ENST00000503638 COLEC12Q5KU26 742 aa12.4□□□□□ -0.42
PGGT1B-204ENST00000503638 METTL21CQ5VZV1 264 aa12.4□□□□□ -0.42
PGGT1B-204ENST00000503638 H3F3CQ6NXT2 135 aa12.4□□□□□ -0.42
PGGT1B-204ENST00000503638 WDR53Q7Z5U6 358 aaPredicted RBP12.4□□□□□ -0.42
PGGT1B-204ENST00000503638 PRR22Q8IZ63 422 aa12.4□□□□□ -0.42
PGGT1B-204ENST00000503638 HORMAD2Q8N7B1 307 aa12.4□□□□□ -0.42
PGGT1B-204ENST00000503638 FAM13CQ8NE31 585 aa12.4□□□□□ -0.42
PGGT1B-204ENST00000503638 NUP43Q8NFH3 380 aa12.4□□□□□ -0.42
PGGT1B-204ENST00000503638 OR5M3Q8NGP4 307 aa12.4□□□□□ -0.42
PGGT1B-204ENST00000503638 NUBPLQ8TB37 319 aa12.4□□□□□ -0.42
PGGT1B-204ENST00000503638 STON2Q8WXE9 905 aa12.4□□□□□ -0.42
PGGT1B-204ENST00000503638 VPS33AQ96AX1 596 aa12.4□□□□□ -0.42
PGGT1B-204ENST00000503638 CTHRC1Q96CG8 243 aa12.4□□□□□ -0.42
PGGT1B-204ENST00000503638 C5orf34Q96MH7 638 aa12.4□□□□□ -0.42
PGGT1B-204ENST00000503638 MS4A4EQ96PG1 132 aa12.4□□□□□ -0.42
PGGT1B-204ENST00000503638 NPAS2Q99743 824 aa12.4□□□□□ -0.42
PGGT1B-204ENST00000503638 FOLH1BQ9HBA9 442 aa12.4□□□□□ -0.42
PGGT1B-204ENST00000503638 HPF1Q9NWY4 346 aa12.4□□□□□ -0.42
PGGT1B-204ENST00000503638 MAP10Q9P2G4 905 aa12.4□□□□□ -0.42
PGGT1B-204ENST00000503638 C19orf53Q9UNZ5 99 aaPredicted RBP12.4□□□□□ -0.42
PGGT1B-204ENST00000503638 DTX4Q9Y2E6 619 aa12.4□□□□□ -0.42
PGGT1B-204ENST00000503638 PCDHGB7Q9Y5F8 929 aa12.4□□□□□ -0.42
PGGT1B-204ENST00000503638 RNF103-CHMP3A0A140T963 221 aa12.39□□□□□ -0.43
PGGT1B-204ENST00000503638 PLOD2O00469 737 aa12.39□□□□□ -0.43
PGGT1B-204ENST00000503638 RFXANKO14593 260 aa12.39□□□□□ -0.43
PGGT1B-204ENST00000503638 SLC28A2O43868 658 aa12.39□□□□□ -0.43
PGGT1B-204ENST00000503638 ERN1O75460 977 aaKnown RBP12.39□□□□□ -0.43
PGGT1B-204ENST00000503638 WISP1O95388 367 aa12.39□□□□□ -0.43
PGGT1B-204ENST00000503638 S1PR1P21453 382 aa12.39□□□□□ -0.43
PGGT1B-204ENST00000503638 DRD4P21917 467 aa12.39□□□□□ -0.43
PGGT1B-204ENST00000503638 SOX3P41225 446 aa12.39□□□□□ -0.43
PGGT1B-204ENST00000503638 FRKP42685 505 aaPredicted RBP12.39□□□□□ -0.43
PGGT1B-204ENST00000503638 RFX3P48380 749 aa12.39□□□□□ -0.43
PGGT1B-204ENST00000503638 EMDP50402 254 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms