RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 PSMC5P62195 406 aa4.69□□□□□ -1.66
NIPBL-203ENST00000503274 KIAA0141Q14154 515 aaPredicted RBP4.69□□□□□ -1.66
NIPBL-203ENST00000503274 GIT2Q14161 759 aa4.69□□□□□ -1.66
NIPBL-203ENST00000503274 ZRANB3Q5FWF4 1079 aa4.69□□□□□ -1.66
NIPBL-203ENST00000503274 HERC4Q5GLZ8 1057 aaPredicted RBP4.69□□□□□ -1.66
NIPBL-203ENST00000503274 ARMCX4Q5H9R4 360 aa4.69□□□□□ -1.66
NIPBL-203ENST00000503274 TWF2Q6IBS0 349 aaKnown RBP4.69□□□□□ -1.66
NIPBL-203ENST00000503274 TCEAL6Q6IPX3 200 aa4.69□□□□□ -1.66
NIPBL-203ENST00000503274 CDHR3Q6ZTQ4 885 aa4.69□□□□□ -1.66
NIPBL-203ENST00000503274 ZNF410Q86VK4 478 aa4.69□□□□□ -1.66
NIPBL-203ENST00000503274 FAM228AQ86W67 206 aa4.69□□□□□ -1.66
NIPBL-203ENST00000503274 ECHDC2Q86YB7 292 aa4.69□□□□□ -1.66
NIPBL-203ENST00000503274 DND1Q8IYX4 353 aaKnown RBP4.69□□□□□ -1.66
NIPBL-203ENST00000503274 NHLRC2Q8NBF2 726 aa4.69□□□□□ -1.66
NIPBL-203ENST00000503274 COLGALT1Q8NBJ5 622 aa4.69□□□□□ -1.66
NIPBL-203ENST00000503274 UXS1Q8NBZ7 420 aa4.69□□□□□ -1.66
NIPBL-203ENST00000503274 OR5M9Q8NGP3 310 aa4.69□□□□□ -1.66
NIPBL-203ENST00000503274 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.69□□□□□ -1.66
NIPBL-203ENST00000503274 RASL10AQ92737 203 aa4.69□□□□□ -1.66
NIPBL-203ENST00000503274 CCDC43Q96MW1 224 aaKnown RBP4.69□□□□□ -1.66
NIPBL-203ENST00000503274 ATG101Q9BSB4 218 aa4.69□□□□□ -1.66
NIPBL-203ENST00000503274 C3orf14Q9HBI5 128 aa4.69□□□□□ -1.66
NIPBL-203ENST00000503274 CTSZQ9UBR2 303 aa4.69□□□□□ -1.66
NIPBL-203ENST00000503274 LOXHD1Q8IVV2 1947 aa4.69□□□□□ -1.66
NIPBL-203ENST00000503274 ZFHX2Q9C0A1 2572 aaPredicted RBP4.69□□□□□ -1.66
NIPBL-203ENST00000503274 PTPRZ1P23471 2315 aaPredicted RBP4.68□□□□□ -1.66
NIPBL-203ENST00000503274 ST8SIA3O43173 380 aa4.68□□□□□ -1.66
NIPBL-203ENST00000503274 MLNRO43193 412 aa4.68□□□□□ -1.66
NIPBL-203ENST00000503274 ACSL4O60488 711 aa4.68□□□□□ -1.66
NIPBL-203ENST00000503274 HPRP00739 348 aa4.68□□□□□ -1.66
NIPBL-203ENST00000503274 IGHV3-13P01766 116 aa4.68□□□□□ -1.66
NIPBL-203ENST00000503274 SELEP16581 610 aa4.68□□□□□ -1.66
NIPBL-203ENST00000503274 ZNF10P21506 573 aaPredicted RBP4.68□□□□□ -1.66
NIPBL-203ENST00000503274 DNAJB1P25685 340 aa4.68□□□□□ -1.66
NIPBL-203ENST00000503274 PKLRP30613 574 aa4.68□□□□□ -1.66
NIPBL-203ENST00000503274 CA8P35219 290 aa4.68□□□□□ -1.66
NIPBL-203ENST00000503274 DSCR10P59022 87 aa4.68□□□□□ -1.66
NIPBL-203ENST00000503274 KRTAP10-5P60370 271 aa4.68□□□□□ -1.66
NIPBL-203ENST00000503274 RPP38P78345 283 aaKnown RBP4.68□□□□□ -1.66
NIPBL-203ENST00000503274 MXD4Q14582 209 aaPredicted RBP4.68□□□□□ -1.66
NIPBL-203ENST00000503274 SMC1AQ14683 1233 aaKnown RBP4.68□□□□□ -1.66
NIPBL-203ENST00000503274 PLPP4Q5VZY2 271 aa4.68□□□□□ -1.66
NIPBL-203ENST00000503274 ARMC3Q5W041 872 aa4.68□□□□□ -1.66
NIPBL-203ENST00000503274 SLC27A4Q6P1M0 643 aa4.68□□□□□ -1.66
NIPBL-203ENST00000503274 TMEM184AQ6ZMB5 413 aa4.68□□□□□ -1.66
NIPBL-203ENST00000503274 Q6ZVQ6 151 aa4.68□□□□□ -1.66
NIPBL-203ENST00000503274 CATSPER4Q7RTX7 472 aa4.68□□□□□ -1.66
NIPBL-203ENST00000503274 OR8H3Q8N146 312 aa4.68□□□□□ -1.66
NIPBL-203ENST00000503274 ABHD12Q8N2K0 398 aa4.68□□□□□ -1.66
NIPBL-203ENST00000503274 CNNM3Q8NE01 707 aa4.68□□□□□ -1.66
NIPBL-203ENST00000503274 URGCPQ8TCY9 931 aa4.68□□□□□ -1.66
NIPBL-203ENST00000503274 TCP11Q8WWU5 503 aa4.68□□□□□ -1.66
NIPBL-203ENST00000503274 CEP170P1Q96L14 293 aa4.68□□□□□ -1.66
NIPBL-203ENST00000503274 CASD1Q96PB1 797 aa4.68□□□□□ -1.66
NIPBL-203ENST00000503274 PRMT1Q99873 361 aaKnown RBP4.68□□□□□ -1.66
NIPBL-203ENST00000503274 MLPHQ9BV36 600 aaPredicted RBP4.68□□□□□ -1.66
NIPBL-203ENST00000503274 TUBB1Q9H4B7 451 aa4.68□□□□□ -1.66
NIPBL-203ENST00000503274 SLCO1C1Q9NYB5 712 aa4.68□□□□□ -1.66
NIPBL-203ENST00000503274 VPS18Q9P253 973 aa4.68□□□□□ -1.66
NIPBL-203ENST00000503274 GTF3C4Q9UKN8 822 aa4.68□□□□□ -1.66
NIPBL-203ENST00000503274 PIN4Q9Y237 131 aaKnown RBP4.68□□□□□ -1.66
NIPBL-203ENST00000503274 ZNF510Q9Y2H8 683 aa4.68□□□□□ -1.66
NIPBL-203ENST00000503274 MRPS18CQ9Y3D5 142 aaKnown RBP4.68□□□□□ -1.66
NIPBL-203ENST00000503274 HBS1LQ9Y450 684 aaKnown RBP4.68□□□□□ -1.66
NIPBL-203ENST00000503274 RIF1Q5UIP0 2472 aaKnown RBP4.68□□□□□ -1.66
NIPBL-203ENST00000503274 IGKV6-21A0A0C4DH24 114 aa4.67□□□□□ -1.66
NIPBL-203ENST00000503274 OOEPA6NGQ2 149 aa4.67□□□□□ -1.66
NIPBL-203ENST00000503274 ZNF732B4DXR9 585 aa4.67□□□□□ -1.66
NIPBL-203ENST00000503274 LOC730098B7Z3J9 87 aa4.67□□□□□ -1.66
NIPBL-203ENST00000503274 CTDSPLO15194 276 aa4.67□□□□□ -1.66
NIPBL-203ENST00000503274 SIGLEC5O15389 551 aa4.67□□□□□ -1.66
NIPBL-203ENST00000503274 TNFSF12O43508 249 aa4.67□□□□□ -1.66
NIPBL-203ENST00000503274 PFKFB2O60825 505 aa4.67□□□□□ -1.66
NIPBL-203ENST00000503274 ERLIN2O94905 339 aa4.67□□□□□ -1.66
NIPBL-203ENST00000503274 TDP2O95551 362 aa4.67□□□□□ -1.66
NIPBL-203ENST00000503274 CXCL14O95715 111 aa4.67□□□□□ -1.66
NIPBL-203ENST00000503274 GATA2P23769 480 aaPredicted RBP4.67□□□□□ -1.66
NIPBL-203ENST00000503274 AXLP30530 894 aa4.67□□□□□ -1.66
NIPBL-203ENST00000503274 KRT2P35908 639 aa4.67□□□□□ -1.66
NIPBL-203ENST00000503274 IER3P46695 156 aa4.67□□□□□ -1.66
NIPBL-203ENST00000503274 KCNJ1P48048 391 aa4.67□□□□□ -1.66
NIPBL-203ENST00000503274 PPP2R5CQ13362 524 aa4.67□□□□□ -1.66
NIPBL-203ENST00000503274 SCARB2Q14108 478 aa4.67□□□□□ -1.66
NIPBL-203ENST00000503274 TFDP1Q14186 410 aa4.67□□□□□ -1.66
NIPBL-203ENST00000503274 ZNF146Q15072 292 aa4.67□□□□□ -1.66
NIPBL-203ENST00000503274 MAPK11Q15759 364 aa4.67□□□□□ -1.66
NIPBL-203ENST00000503274 UPP1Q16831 310 aa4.67□□□□□ -1.66
NIPBL-203ENST00000503274 ADGRD2Q7Z7M1 963 aa4.67□□□□□ -1.66
NIPBL-203ENST00000503274 AMER3Q8N944 861 aa4.67□□□□□ -1.66
NIPBL-203ENST00000503274 MRPL43Q8N983 215 aaKnown RBP4.67□□□□□ -1.66
NIPBL-203ENST00000503274 C17orf47Q8NEP4 570 aa4.67□□□□□ -1.66
NIPBL-203ENST00000503274 CKAP2Q8WWK9 683 aa4.67□□□□□ -1.66
NIPBL-203ENST00000503274 RPGRIP1Q96KN7 1286 aa4.67□□□□□ -1.66
NIPBL-203ENST00000503274 MBOAT7Q96N66 472 aa4.67□□□□□ -1.66
NIPBL-203ENST00000503274 ADPGKQ9BRR6 497 aa4.67□□□□□ -1.66
NIPBL-203ENST00000503274 CHCHD5Q9BSY4 110 aa4.67□□□□□ -1.66
NIPBL-203ENST00000503274 CWH43Q9H720 699 aa4.67□□□□□ -1.66
NIPBL-203ENST00000503274 DNAJB9Q9UBS3 223 aa4.67□□□□□ -1.66
NIPBL-203ENST00000503274 ARMCX3Q9UH62 379 aaPredicted RBP4.67□□□□□ -1.66
NIPBL-203ENST00000503274 CDH7Q9ULB5 785 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms