RNA–Protein interactions for RNA: ENST00000502639.1

CDC42SE2-204, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-204ENST00000502639 RBM18Q96H35 190 aaKnown RBP3.15□□□□□ -1.91
CDC42SE2-204ENST00000502639 C19orf43Q9BQ61 176 aa3.15□□□□□ -1.91
CDC42SE2-204ENST00000502639 CBWD1Q9BRT8 395 aa3.15□□□□□ -1.91
CDC42SE2-204ENST00000502639 ALG9Q9H6U8 611 aa3.15□□□□□ -1.91
CDC42SE2-204ENST00000502639 HPS4Q9NQG7 708 aa3.15□□□□□ -1.91
CDC42SE2-204ENST00000502639 TNFRSF19Q9NS68 423 aa3.15□□□□□ -1.91
CDC42SE2-204ENST00000502639 DNPEPQ9ULA0 475 aa3.15□□□□□ -1.91
CDC42SE2-204ENST00000502639 ENTPD4Q9Y227 616 aa3.15□□□□□ -1.91
CDC42SE2-204ENST00000502639 VSIG4Q9Y279 399 aa3.15□□□□□ -1.91
CDC42SE2-204ENST00000502639 ZNF646O15015 1829 aaPredicted RBP3.14□□□□□ -1.91
CDC42SE2-204ENST00000502639 TRBV2A0A0J9YWF9 115 aa3.14□□□□□ -1.91
CDC42SE2-204ENST00000502639 TYROBPO43914 113 aa3.14□□□□□ -1.91
CDC42SE2-204ENST00000502639 ECDO95905 644 aaPredicted RBP3.14□□□□□ -1.91
CDC42SE2-204ENST00000502639 HLA-DPA1P20036 260 aa3.14□□□□□ -1.91
CDC42SE2-204ENST00000502639 AHCYP23526 432 aa3.14□□□□□ -1.91
CDC42SE2-204ENST00000502639 ACP1P24666 158 aa3.14□□□□□ -1.91
CDC42SE2-204ENST00000502639 COPB2P35606 906 aa3.14□□□□□ -1.91
CDC42SE2-204ENST00000502639 SLC7A2P52569 658 aa3.14□□□□□ -1.91
CDC42SE2-204ENST00000502639 CXCL6P80162 114 aa3.14□□□□□ -1.91
CDC42SE2-204ENST00000502639 UBXN1Q04323 297 aa3.14□□□□□ -1.91
CDC42SE2-204ENST00000502639 CNPY1Q3B7I2 92 aa3.14□□□□□ -1.91
CDC42SE2-204ENST00000502639 MFSD7Q6UXD7 560 aa3.14□□□□□ -1.91
CDC42SE2-204ENST00000502639 STOX1Q6ZVD7 989 aa3.14□□□□□ -1.91
CDC42SE2-204ENST00000502639 ARL14Q8N4G2 192 aa3.14□□□□□ -1.91
CDC42SE2-204ENST00000502639 C11orf42Q8N5U0 333 aa3.14□□□□□ -1.91
CDC42SE2-204ENST00000502639 CCNYQ8ND76 341 aa3.14□□□□□ -1.91
CDC42SE2-204ENST00000502639 ZNF397Q8NF99 534 aaPredicted RBP3.14□□□□□ -1.91
CDC42SE2-204ENST00000502639 NEK11Q8NG66 645 aa3.14□□□□□ -1.91
CDC42SE2-204ENST00000502639 ATP6V0A1Q93050 837 aa3.14□□□□□ -1.91
CDC42SE2-204ENST00000502639 CCDC51Q96ER9 411 aa3.14□□□□□ -1.91
CDC42SE2-204ENST00000502639 PPP1R16AQ96I34 528 aa3.14□□□□□ -1.91
CDC42SE2-204ENST00000502639 COQ7Q99807 217 aa3.14□□□□□ -1.91
CDC42SE2-204ENST00000502639 TSPY26PQ9H489 355 aa3.14□□□□□ -1.91
CDC42SE2-204ENST00000502639 ESM1Q9NQ30 184 aa3.14□□□□□ -1.91
CDC42SE2-204ENST00000502639 CENPMQ9NSP4 180 aa3.14□□□□□ -1.91
CDC42SE2-204ENST00000502639 PRODH2Q9UF12 536 aa3.14□□□□□ -1.91
CDC42SE2-204ENST00000502639 CIDEBQ9UHD4 219 aa3.14□□□□□ -1.91
CDC42SE2-204ENST00000502639 STRAPQ9Y3F4 350 aaKnown RBP3.14□□□□□ -1.91
CDC42SE2-204ENST00000502639 RNF115Q9Y4L5 304 aa3.14□□□□□ -1.91
CDC42SE2-204ENST00000502639 ATRXP46100 2492 aa3.14□□□□□ -1.91
CDC42SE2-204ENST00000502639 ABCC9O60706 1549 aa3.14□□□□□ -1.91
CDC42SE2-204ENST00000502639 CFAP65Q6ZU64 1925 aaKnown RBP3.13□□□□□ -1.91
CDC42SE2-204ENST00000502639 A0A0U1RQG5 324 aaPredicted RBP3.13□□□□□ -1.91
CDC42SE2-204ENST00000502639 TRABD2BA6NFA1 517 aa3.13□□□□□ -1.91
CDC42SE2-204ENST00000502639 TRIM64A6NGJ6 449 aa3.13□□□□□ -1.91
CDC42SE2-204ENST00000502639 FRG2CA6NGY1 282 aa3.13□□□□□ -1.91
CDC42SE2-204ENST00000502639 TRIM64BA6NI03 449 aa3.13□□□□□ -1.91
CDC42SE2-204ENST00000502639 SLC9B1P1A6NJY1 282 aa3.13□□□□□ -1.91
CDC42SE2-204ENST00000502639 PDLIM1O00151 329 aa3.13□□□□□ -1.91
CDC42SE2-204ENST00000502639 PDE5AO76074 875 aa3.13□□□□□ -1.91
CDC42SE2-204ENST00000502639 CXCL10P02778 98 aa3.13□□□□□ -1.91
CDC42SE2-204ENST00000502639 HOXB7P09629 217 aa3.13□□□□□ -1.91
CDC42SE2-204ENST00000502639 LAMP1P11279 417 aa3.13□□□□□ -1.91
CDC42SE2-204ENST00000502639 IDSP22304 550 aa3.13□□□□□ -1.91
CDC42SE2-204ENST00000502639 RPL34P49207 117 aaKnown RBP3.13□□□□□ -1.91
CDC42SE2-204ENST00000502639 CASP9P55211 416 aa3.13□□□□□ -1.91
CDC42SE2-204ENST00000502639 ZSWIM7Q19AV6 140 aa3.13□□□□□ -1.91
CDC42SE2-204ENST00000502639 AGKQ53H12 422 aa3.13□□□□□ -1.91
CDC42SE2-204ENST00000502639 PRR30Q53SZ7 412 aaPredicted RBP3.13□□□□□ -1.91
CDC42SE2-204ENST00000502639 DPY19L2P2Q6ZN68 376 aa3.13□□□□□ -1.91
CDC42SE2-204ENST00000502639 GCNT7Q6ZNI0 430 aa3.13□□□□□ -1.91
CDC42SE2-204ENST00000502639 PYROXD2Q8N2H3 581 aa3.13□□□□□ -1.91
CDC42SE2-204ENST00000502639 DLX4Q92988 240 aaPredicted RBP3.13□□□□□ -1.91
CDC42SE2-204ENST00000502639 LHX4Q969G2 390 aa3.13□□□□□ -1.91
CDC42SE2-204ENST00000502639 PNNQ9H307 717 aaKnown RBP3.13□□□□□ -1.91
CDC42SE2-204ENST00000502639 RAI14Q9P0K7 980 aa3.13□□□□□ -1.91
CDC42SE2-204ENST00000502639 MBD2Q9UBB5 411 aa3.13□□□□□ -1.91
CDC42SE2-204ENST00000502639 RSPH14Q9UHP6 348 aa3.13□□□□□ -1.91
CDC42SE2-204ENST00000502639 PURGQ9UJV8 347 aaKnown RBP3.13□□□□□ -1.91
CDC42SE2-204ENST00000502639 NPIPA5A0A0B4J1W7 369 aa3.12□□□□□ -1.91
CDC42SE2-204ENST00000502639 IGHV3-35A0A0C4DH35 117 aa3.12□□□□□ -1.91
CDC42SE2-204ENST00000502639 NPIPA5E9PKD4 350 aa3.12□□□□□ -1.91
CDC42SE2-204ENST00000502639 EI24O14681 340 aa3.12□□□□□ -1.91
CDC42SE2-204ENST00000502639 STK17BO94768 372 aa3.12□□□□□ -1.91
CDC42SE2-204ENST00000502639 TOXO94900 526 aa3.12□□□□□ -1.91
CDC42SE2-204ENST00000502639 NUDT14O95848 222 aa3.12□□□□□ -1.91
CDC42SE2-204ENST00000502639 PVRP15151 417 aa3.12□□□□□ -1.91
CDC42SE2-204ENST00000502639 GNSP15586 552 aa3.12□□□□□ -1.91
CDC42SE2-204ENST00000502639 KLK2P20151 261 aa3.12□□□□□ -1.91
CDC42SE2-204ENST00000502639 IGFBP5P24593 272 aa3.12□□□□□ -1.91
CDC42SE2-204ENST00000502639 OR1D4P47884 311 aa3.12□□□□□ -1.91
CDC42SE2-204ENST00000502639 NT5C2P49902 561 aa3.12□□□□□ -1.91
CDC42SE2-204ENST00000502639 PPIAP62937 165 aaKnown RBP3.12□□□□□ -1.91
CDC42SE2-204ENST00000502639 SHROOM1Q2M3G4 852 aaPredicted RBP3.12□□□□□ -1.91
CDC42SE2-204ENST00000502639 LRRC17Q8N6Y2 441 aa3.12□□□□□ -1.91
CDC42SE2-204ENST00000502639 COLGALT1Q8NBJ5 622 aa3.12□□□□□ -1.91
CDC42SE2-204ENST00000502639 FNDC8Q8TC99 324 aa3.12□□□□□ -1.91
CDC42SE2-204ENST00000502639 MGARPQ8TDB4 240 aa3.12□□□□□ -1.91
CDC42SE2-204ENST00000502639 PHYHIPQ92561 330 aa3.12□□□□□ -1.91
CDC42SE2-204ENST00000502639 CCT8L2Q96SF2 557 aa3.12□□□□□ -1.91
CDC42SE2-204ENST00000502639 APOOQ9BUR5 198 aa3.12□□□□□ -1.91
CDC42SE2-204ENST00000502639 TRIM9Q9C026 710 aa3.12□□□□□ -1.91
CDC42SE2-204ENST00000502639 DDX47Q9H0S4 455 aaKnown RBP3.12□□□□□ -1.91
CDC42SE2-204ENST00000502639 RSPH9Q9H1X1 276 aaPredicted RBP3.12□□□□□ -1.91
CDC42SE2-204ENST00000502639 THAP9Q9H5L6 903 aa3.12□□□□□ -1.91
CDC42SE2-204ENST00000502639 IKZF5Q9H5V7 419 aa3.12□□□□□ -1.91
CDC42SE2-204ENST00000502639 SYTL2Q9HCH5 934 aa3.12□□□□□ -1.91
CDC42SE2-204ENST00000502639 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.12□□□□□ -1.91
CDC42SE2-204ENST00000502639 IMPAD1Q9NX62 359 aa3.12□□□□□ -1.91
CDC42SE2-204ENST00000502639 ABCD2Q9UBJ2 740 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms